CF834421

Overview
NameCF834421
Unique NameCF834421
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1232 contig Csv1_Contig1232:2..838. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1)

HSP 1 Score: 387.882 bits (995), Expect = 3.803e-107
Identity = 180/228 (78.95%), Postives = 206/228 (90.35%), Query Frame = -2
Query:  153 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRVAAV 836
            NCLFRMGGAAILL         SKY+L+ TVRTHKGADDKC+ C+ Q ED   ++GV+LSK+LMAVAG+ALKTNITTLGP+VLP SEQLLFFATLV +K+FKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNL+L+EWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGR++KGDR WQIAFGSGFKCNS+VW+A+R++NP KEKNPW++EIHEFPV VP+V+ +
Sbjct:  282 NCLFRMGGAAILLSNKRWDRRRSKYELVDTVRTHKGADDKCFGCITQEEDSASKIGVTLSKELMAVAGDALKTNITTLGPLVLPTSEQLLFFATLVGRKLFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLKLTEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRIWQIAFGSGFKCNSSVWRAVRSVNPKKEKNPWMDEIHEFPVEVPKVSTI 509          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2)

HSP 1 Score: 384.8 bits (987), Expect = 3.219e-106
Identity = 189/235 (80.43%), Postives = 211/235 (89.79%), Query Frame = -2
Query:  153 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQRED--DTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMK-IKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK----NPWIEEIHEFPVHVPRVAAV 836
            NC+FRMGGAA+LL         SKYQLIHTVRTHKG+DD  +NCV+QRED  D K++GVSLSK+LMA+AGEALKTNITTLGP+VLPMSEQLLFFATLVA+KVF +K IKPYIPDFKLAFEHFCIHAGGRAVLDE+EKNL+LSEWHMEPSRMTL RFGNTSSSSLWYELAYSEAKGR+++GDRTWQIAFGSGFKCNSAVW+ALRTI+P+KEK    NPWI+EIHEFPV VPR + V
Sbjct:  287 NCIFRMGGAAVLLSNRSSDRCRSKYQLIHTVRTHKGSDDNAFNCVYQREDNDDNKQIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFNVKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWRALRTIDPSKEKKKKTNPWIDEIHEFPVPVPRTSPV 521          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1)

HSP 1 Score: 377.481 bits (968), Expect = 5.140e-104
Identity = 185/234 (79.06%), Postives = 208/234 (88.89%), Query Frame = -2
Query:  153 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQRED----DTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMK-IKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK-NPWIEEIHEFPVHVPRVAAV 836
            NC+FRMGGAA+LL         SKYQLIHTVRTHKGADD  + CV+QRED    +T ++GVSLSK+LMA+AGEALKTNITTLGP+VLPMSEQLLFFATLVA+KVFK+K IKPYIPDFKLAFEHFCIHAGGRAVLDE+EKNL+LSEWHMEPSRMTL RFGNTSSSSLWYELAYSEAKGR+++GDRTWQIAFGSGFKCNSAVW+ALRTI+P  EK NPWI+EI +FPV VPR+  +
Sbjct:  293 NCIFRMGGAAVLLSNRSSDRSRSKYQLIHTVRTHKGADDNAFGCVYQREDNNAEETGKIGVSLSKNLMAIAGEALKTNITTLGPLVLPMSEQLLFFATLVARKVFKVKKIKPYIPDFKLAFEHFCIHAGGRAVLDEIEKNLDLSEWHMEPSRMTLNRFGNTSSSSLWYELAYSEAKGRIKRGDRTWQIAFGSGFKCNSAVWKALRTIDPMDEKTNPWIDEIDDFPVQVPRITPI 526          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1)

HSP 1 Score: 333.183 bits (853), Expect = 1.112e-90
Identity = 157/220 (71.36%), Postives = 187/220 (85.00%), Query Frame = -2
Query:  177 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPV 836
            NCLFR+GG+A+LL         SKY+L+H VRTH+GADDK + CV+Q +DDT R GVSLSKDLMA+AGE LKTNITTLGP+VLP+SEQ+LFF TLV KK+F  K+KPYIPDFKLAFEHFCIHAGGRAV+DELEKNL+LS  H+E SRMTL+RFGNTSSSS+WYELAY EAKGRMR+G+R WQIAFGSGFKCNSA+W+ALR + P+   +PW + I ++PV
Sbjct:  294 NCLFRVGGSAVLLSNKSRDKRRSKYRLVHVVRTHRGADDKAFRCVYQEQDDTGRTGVSLSKDLMAIAGETLKTNITTLGPLVLPISEQILFFMTLVVKKLFNGKVKPYIPDFKLAFEHFCIHAGGRAVIDELEKNLQLSPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRRGNRVWQIAFGSGFKCNSAIWEALRHVKPS-NNSPWEDCIDKYPV 512          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 7.205e-90
Identity = 154/223 (69.06%), Postives = 190/223 (85.20%), Query Frame = -2
Query:  171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAK-EKNPWIEEIHEFPVHV 836
            NC+FRMGGAAILL         SKY L++ VRTHKG+DDK YNCV+Q+ED+   +GVSL+++LM+VAG+ALKTNITTLGP+VLP+SEQL+F  +LV +K+FK+K+KPYIPDFKLAFEHFCIHAGGRAVLDE++KNL+L +WHMEPSRMTL+RFGNTSSSSLWYE+AY+EAKGR++ GDR WQIAFGSGFKCNSAVW+ALR ++  +   N W   I ++PV V
Sbjct:  304 NCIFRMGGAAILLSNRRQDRKKSKYSLVNVVRTHKGSDDKNYNCVYQKEDERGTIGVSLARELMSVAGDALKTNITTLGPMVLPLSEQLMFLISLVKRKMFKLKVKPYIPDFKLAFEHFCIHAGGRAVLDEVQKNLDLKDWHMEPSRMTLHRFGNTSSSSLWYEMAYTEAKGRVKAGDRLWQIAFGSGFKCNSAVWKALRPVSTEEMTGNAWAGSIDQYPVKV 526          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1)

HSP 1 Score: 327.02 bits (837), Expect = 7.966e-89
Identity = 156/220 (70.91%), Postives = 184/220 (83.64%), Query Frame = -2
Query:  177 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPV 836
            NCLFR+GG+AILL         SKY+L+HTVRTHKGA +K +NCV+Q +DD  + GVSLSKDLMA+AGEALK NITTLGP+VLP+SEQ+LFF TLV KK+F  K+KPYIPDFKLAF+HFCIHAGGRAV+DELEKNL+LS+ H+E SRMTL+RFGNTSSSS+WYELAY EAKGRM+KG+R WQIAFGSGFKCNSAVW AL  + P+   +PW   I  +PV
Sbjct:  290 NCLFRVGGSAILLSNKGKDRRRSKYKLVHTVRTHKGAVEKAFNCVYQEQDDNGKTGVSLSKDLMAIAGEALKANITTLGPLVLPISEQILFFMTLVTKKLFNSKLKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLSQTHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMKKGNRVWQIAFGSGFKCNSAVWVALNNVKPS-VSSPWEHCIDRYPV 508          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1)

HSP 1 Score: 323.939 bits (829), Expect = 6.744e-88
Identity = 155/223 (69.51%), Postives = 187/223 (83.86%), Query Frame = -2
Query:  171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFK-MKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHV 836
            NCLFR+GG+A+LL         SKY+L+HTVRTHKG+D+  +NCV+Q +D+  + GVSLSKDLMA+AGEALKTNIT+LGP+VLP+SEQ+LFFAT VAK++F   K KPYIPDFKLA +HFCIHAGGRAV+DELEK+L+LS  H+E SRMTL+RFGNTSSSS+WYELAY+EAKGRMRKG+R WQIAFGSGFKCNSAVW ALR + P+   NPW   IH +PV +
Sbjct:  264 NCLFRVGGSAVLLSNKPLDRKRSKYKLVHTVRTHKGSDENAFNCVYQEQDECLKTGVSLSKDLMAIAGEALKTNITSLGPLVLPISEQILFFATFVAKRLFNDKKKKPYIPDFKLALDHFCIHAGGRAVIDELEKSLKLSPKHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWVALRNVEPS-VNNPWEHCIHRYPVKI 485          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 5.344e-85
Identity = 150/225 (66.67%), Postives = 180/225 (80.00%), Query Frame = -2
Query:  162 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRV 836
            NCLFRMG AAI +         +KY+L H VRTH+GADDK + CV+++ED    VG++LSKDLMA+AGEALK NITT+GP+VLP SEQLLF  +L+ +K+F  K KPYIPDFKLAFEHFCIHAGGRAV+DEL+KNL+LS  H+E SRMTL+RFGNTSSSSLWYEL+Y E+KGRMR+GDR WQIAFGSGFKCNSAVW+  RTI   K+  PW + I  +PV +P V
Sbjct:  271 NCLFRMGAAAIHMSNRRSDRWRAKYKLSHLVRTHRGADDKSFYCVYEQEDKEGHVGINLSKDLMAIAGEALKANITTIGPLVLPASEQLLFLTSLIGRKIFNPKWKPYIPDFKLAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIESKGRMRRGDRVWQIAFGSGFKCNSAVWKCNRTIKTPKD-GPWSDCIDRYPVFIPEV 494          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 2.652e-84
Identity = 149/225 (66.22%), Postives = 178/225 (79.11%), Query Frame = -2
Query:  162 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEKNPWIEEIHEFPVHVPRV 836
            NCLFRMGGAAILL         +KY+L H VRTH+GADDK YNCV ++ED    VG++LSKDLM +AGEALK NITT+GP+VLP SEQLLF ++L+ +K+F  K KPYIPDFK AFEHFCIHAGGRAV+DEL+KNL+LS  H+E SRMTL+RFGNTSSSSLWYEL+Y EA+GRM++ DR WQIAFGSGFKCNSAVW+  RTI    +   W + I  +PV +P V
Sbjct:  266 NCLFRMGGAAILLSNRRSDRWRAKYKLCHLVRTHRGADDKSYNCVMEQEDKNGNVGINLSKDLMTIAGEALKANITTIGPLVLPASEQLLFLSSLIGRKIFNPKWKPYIPDFKQAFEHFCIHAGGRAVIDELQKNLQLSGEHVEASRMTLHRFGNTSSSSLWYELSYIEAQGRMKRNDRVWQIAFGSGFKCNSAVWKCNRTIKTPTD-GAWSDCIERYPVFIPEV 489          
BLAST of CF834421 vs. ExPASy Swiss-Prot
Match: KCS13_ARATH (3-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana GN=HIC PE=2 SV=1)

HSP 1 Score: 301.212 bits (770), Expect = 4.681e-81
Identity = 144/225 (64.00%), Postives = 178/225 (79.11%), Query Frame = -2
Query:  171 NCLFRMGGAAILLXXXXXXXXXSKYQLIHTVRTHKGADDKCYNCVFQREDDTKRVGVSLSKDLMAVAGEALKTNITTLGPIVLPMSEQLLFFATLVAKKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLELSEWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRMRKGDRTWQIAFGSGFKCNSAVWQALRTINPAKEK---NPWIEEIHEFPVHV 836
            NCLFR+GGAA++L         SKY+L H VRTHKG+ DK Y C  Q+ED    VGV+LSK+L  VAG++LKTN+T LGP+VLP+SE+L F   LV  K+F++K+ PY+PDFKL F+HFCIHAGGRA+LD +EK L LSE+ +EPSRMTL+RFGNTSSSSLWYELAY EAK R+++GDR WQ+AFGSGFKCNS VW+ALRTI PA E    NPW + +H++PVHV
Sbjct:  242 NCLFRVGGAAVMLSNRSQDRVRSKYELTHIVRTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDSLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPDFKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKCNSIVWRALRTI-PANESLVGNPWGDSVHKYPVHV 465          
The following BLAST results are available for this feature:
BLAST of CF834421 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS11_ARATH3.803e-10778.953-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... [more]
KCS17_ARATH3.219e-10680.433-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana... [more]
KCS19_ARATH5.140e-10479.063-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana... [more]
KCS4_ARATH1.112e-9071.363-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana ... [more]
KCS1_ARATH7.205e-9069.063-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS9_ARATH7.966e-8970.913-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana ... [more]
KCS2_ARATH6.744e-8869.51Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis ... [more]
KCS6_ARATH5.344e-8566.673-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana ... [more]
KCS5_ARATH2.652e-8466.223-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana ... [more]
KCS13_ARATH4.681e-8164.003-ketoacyl-CoA synthase 13 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05I02_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834421 ID=CF834421; Name=CF834421; organism=Citrus sinensis; type=EST; length=837bp
CCTTTTTTTTTTTTTAATGAAAATCAAGAAATAATTTTATTGAAACTAAA
TATATGCATCCAAATATTACATATATAATCGTATTGTGAAGTATGCAAAT
CAATCAGATATAATACTCCCTCCATTGAAGGAAATTAAGAAGCCTTCAAA
TCAACAGCTGCTACTCTAGGGACATGAACAGGAAACTCATGAATCTCTTC
AATCCAAGGATTCTTCTCCTTTGCAGGATTGATAGTCCTCAATGCTTGCC
ACACAGCACTGTTACACTTGAATCCTGACCCAAATGCTATCTGCCATGTT
CTGTCTCCTTTTCTCATTCTCCCCTTAGCCTCAGAGTAAGCCAATTCATA
CCACAAAGAGCTGCTAGAAGTGTTACCAAATCTGTAAAGAGTCATTCTTG
AAGGCTCCATATGCCATTCACTGAGCTCAAGATTCTTCTCTAGCTCATCT
AGCACTGCTCTGCCTCCAGCATGGATGCAGAAATGCTCAAAAGCCAACTT
AAAATCTGGGATATATGGCTTGATTTTCATTTTAAAGACTTTTTTAGCAA
CCAAAGTTGCAAAAAATAAGAGTTGTTCTGACATCGGGAGGACTATTGGT
CCCAGTGTTGTGATGTTAGTCTTAAGGGCTTCTCCAGCGACAGCCATGAG
GTCCTTTGAGAGTGAAACTCCAACTCTTTTGGTATCATCTTCTCTTTGGA
AGACACAGTTGTAGCACTTGTCATCAGCTCCCTTGTGGGTCCTTACAGTG
TGGATGAGTTGGTACTTTGATCGGCGGCGATCGGAGGATCGGTTAGATAA
AAGGATAGCGGCACCACCCATGCGGAAGAGGCAATTT
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