CF834422

Overview
NameCF834422
Unique NameCF834422
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS11_ARATH (3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana GN=KCS11 PE=1 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 2.651e-101
Identity = 176/232 (75.86%), Postives = 202/232 (87.07%), Query Frame = 2
Query:   62 DIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            D+  LW  L+YNL++V VCS L+VFL T+YFM+RPR VYLV+F+C+KP+  R+CT++IFM+RS+  G F+EENL FQ+KIL+RSGLG+ TY PEAVL VPPNPCM EAR EAE VMFGAIDELL+KT V  KDIGIL+VNCSLF PTPSLSAM+VNHYKLRGNI SYNLGGMGCSAGLISIDLAK LL   PN+YA+V+SMENITLNWYFGNDRS LVSNCLFRMGGAAILL
Sbjct:   63 DLRSLWEHLQYNLISVVVCSMLLVFLMTIYFMTRPRPVYLVNFSCFKPDESRKCTKKIFMDRSKLTGSFTEENLEFQRKILQRSGLGESTYLPEAVLNVPPNPCMKEARKEAETVMFGAIDELLAKTNVNPKDIGILIVNCSLFNPTPSLSAMVVNHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLHSIPNTYAMVISMENITLNWYFGNDRSKLVSNCLFRMGGAAILL 294          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS19_ARATH (3-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana GN=KCS19 PE=2 SV=1)

HSP 1 Score: 363.999 bits (933), Expect = 5.000e-100
Identity = 174/232 (75.00%), Postives = 204/232 (87.93%), Query Frame = 2
Query:   62 DIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            D+  L+N LR++ ++ T+ ++L++ L T YF +RPR+V+L+DF+CYKP+P   CTRE FM+RS+++G F+E+NLAFQ+KILERSGLGQ TYFPEA+LRVPPNPCM EAR EAE VMFGAID +L KTGVK KDIGILVVNCSLF PTPSLSAMIVN YKLRGNI SYNLGGMGCSAGLISIDLAKQ+LQV PNSYALVVS ENITLNWY GNDRSML+SNC+FRMGGAA+LL
Sbjct:   74 DLSLLYNTLRFHFLSATLATALLISLSTAYFTTRPRRVFLLDFSCYKPDPSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMEEARKEAETVMFGAIDAVLEKTGVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNILSYNLGGMGCSAGLISIDLAKQMLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLL 305          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS17_ARATH (3-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana GN=KCS17 PE=2 SV=2)

HSP 1 Score: 358.992 bits (920), Expect = 1.608e-98
Identity = 173/233 (74.25%), Postives = 205/233 (87.98%), Query Frame = 2
Query:   62 DIVQLWNQL-RYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            D+  L+N L +++ ++ T+ ++L++FL TLYF +RPR+++L+DFACYKP+    CTRE FM+RS+++G F+E+NLAFQ+KILERSGLGQ TYFPEA+LRVPPNPCM+EAR EAE VMFGAID +L KTGV  KDIGILVVNCSLF PTPSLSAMIVN YKLRGN+ SYNLGGMGCSAGLISIDLAKQLLQV PNSYALVVS ENITLNWY GNDRSML+SNC+FRMGGAA+LL
Sbjct:   67 DLTLLYNHLLKFHFLSSTLFAALLIFLTTLYFTTRPRRIFLLDFACYKPDSSLICTRETFMDRSQRVGIFTEDNLAFQQKILERSGLGQKTYFPEALLRVPPNPCMSEARKEAETVMFGAIDAVLEKTGVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNVLSYNLGGMGCSAGLISIDLAKQLLQVQPNSYALVVSTENITLNWYLGNDRSMLLSNCIFRMGGAAVLL 299          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS4_ARATH (3-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana GN=KCS4 PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.237e-82
Identity = 151/232 (65.09%), Postives = 180/232 (77.59%), Query Frame = 2
Query:   62 DIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            D+ QLW  L+YNLV++ +CS+++VF  T+Y M+RPR VYLVDF+CY P    +     FME S   G F +  L FQ+KILERSGLG+ TY PEA+  VPP   MA AR EAE VMFGA+D L + T VK KDIGILVVNCSLF PTPSLSAMIVN YKLRGNI SYNLGGMGCSAG+I++DLAK +L VH N+YA+VVS ENIT NWYFGN +SML+ NCLFR+GG+A+LL
Sbjct:   75 DLKQLWIHLQYNLVSIIICSAILVFGLTVYVMTRPRPVYLVDFSCYLPPDHLKAPYARFMEHSRLTGDFDDSALEFQRKILERSGLGEDTYVPEAMHYVPPRISMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSYNLGGMGCSAGVIAVDLAKDMLLVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLL 306          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS9_ARATH (3-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana GN=KCS9 PE=2 SV=1)

HSP 1 Score: 300.827 bits (769), Expect = 5.198e-81
Identity = 145/232 (62.50%), Postives = 179/232 (77.16%), Query Frame = 2
Query:   62 DIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            D+ Q+W  L+YNLV     S+L +F  T+Y MSRPR VYLVD++CY P    Q   + FM+ S+ I  F+E +L FQ+KILERSGLG+ TY PEA+  +PP P M  AR E+E VMFGA+D+L   T +  +DIG+LVVNCSLF PTPSLSAMIVN YKLRGN+ S+NLGGMGCSAG+ISIDLAK +LQVH N+YA+VVS ENIT NWYFGN ++ML+ NCLFR+GG+AILL
Sbjct:   71 DLYQIWLHLQYNLVAFIFLSALAIFGSTVYIMSRPRSVYLVDYSCYLPPESLQVKYQKFMDHSKLIEDFNESSLEFQRKILERSGLGEETYLPEALHCIPPRPTMMAAREESEQVMFGALDKLFENTKINPRDIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNVKSFNLGGMGCSAGVISIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKAMLIPNCLFRVGGSAILL 302          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS1_ARATH (3-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana GN=KCS1 PE=1 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 4.554e-77
Identity = 141/236 (59.75%), Postives = 175/236 (74.15%), Query Frame = 2
Query:   56 FQDIVQLWNQLRYNLVTVT--VCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            F    +LW+     L T T   C   + F+ TLY  +R + VYLVDF+CYKPE ER+ + + F+  +E+ G F+++ + FQ++I  R+GLG  TY P  +   PP   M+EAR EAE VMFGA+D L  KTG+K  ++GIL+VNCSLF PTPSLSAMIVNHYK+R +I SYNLGGMGCSAGLISIDLA  LL+ +PNSYA+VVS ENITLNWYFGNDRSML+ NC+FRMGGAAILL
Sbjct:   81 FDTFSELWSNQAVQLDTATRLTCLVFLSFVLTLYVANRSKPVYLVDFSCYKPEDERKISVDSFLTMTEENGSFTDDTVQFQQRISNRAGLGDETYLPRGITSTPPKLNMSEARAEAEAVMFGALDSLFEKTGIKPAEVGILIVNCSLFNPTPSLSAMIVNHYKMREDIKSYNLGGMGCSAGLISIDLANNLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAILL 316          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS6_ARATH (3-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana GN=CUT1 PE=2 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 6.804e-73
Identity = 132/231 (57.14%), Postives = 174/231 (75.32%), Query Frame = 2
Query:   59 QDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAI 751
            ++I+ +WN L+++LV V   S  ++F+ T+YFMS+PR +YLVD++CYKP    +     FME S  I     +++ FQ +ILERSGLG+ T  P A+  +PP P M  AR+EA+MV+F A+D+L  KTG+K KD+ IL+VNCSLF PTPSLSAM++N YKLR NI S+NL GMGCSAGLIS+DLA+ LLQVHPNS A++VS E IT N+Y GN+R+ML+ NCLFRMG AAI
Sbjct:   51 EEILNVWNSLQFDLVQVLCSSFFVIFISTVYFMSKPRTIYLVDYSCYKPPVTCRVPFATFMEHSRLILKDKPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMDAARSEAQMVIFEAMDDLFKKTGLKPKDVDILIVNCSLFSPTPSLSAMVINKYKLRSNIKSFNLSGMGCSAGLISVDLARDLLQVHPNSNAIIVSTEIITPNYYQGNERAMLLPNCLFRMGAAAI 281          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS2_ARATH (Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis thaliana GN=KCS2 PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.586e-72
Identity = 129/225 (57.33%), Postives = 168/225 (74.67%), Query Frame = 2
Query:   83 QLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            QL YN        +L +    ++FMSRPR +YL+D++CY P   ++ + + FM  S  I  FSE +L FQ+KIL RSGLG+ TY P+++  +PP P MA AR EAE V+FGA+D L   T +  ++IG+LVVNCSLF PTPSLSAMIVN YKLRGNI S+NLGGMGCSAG+I++DLA  +LQ+H N++ALVVS ENIT NWYFGN ++ML+ NCLFR+GG+A+LL
Sbjct:   52 QLYYNSTGFIFVITLAIVGSIVFFMSRPRSIYLLDYSCYLPPSSQKVSYQKFMNNSSLIQDFSETSLEFQRKILIRSGLGEETYLPDSIHSIPPRPTMAAAREEAEQVIFGALDNLFENTKINPREIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNIKSFNLGGMGCSAGVIAVDLASDMLQIHRNTFALVVSTENITQNWYFGNKKAMLIPNCLFRVGGSAVLL 276          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS10_ARATH (3-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana GN=FDH PE=1 SV=2)

HSP 1 Score: 271.937 bits (694), Expect = 2.586e-72
Identity = 129/230 (56.09%), Postives = 169/230 (73.48%), Query Frame = 2
Query:   71 QLWNQL-RYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            ++W +L  Y+L TV     + V    +YFMSRPR VYL+DFACYKP  E + T+E F+E + + G F EE L F+K+IL+ SG+G  TY P ++        M E R EA  V+FGA+DEL  KT VK KD+G+LVVNCS+F PTPSLSAM++NHYK+RGNI SYNLGGMGCSAG+I+IDLA+ +LQ +PNSYA+VVS E +  NWY G+D+SM++ NC FRMG +A++L
Sbjct:   86 EIWKKLWDYDLATVIGFFGVFVLTACVYFMSRPRSVYLIDFACYKPSDEHKVTKEEFIELARKSGKFDEETLGFKKRILQASGIGDETYVPRSISSSENITTMKEGREEASTVIFGALDELFEKTRVKPKDVGVLVVNCSIFNPTPSLSAMVINHYKMRGNILSYNLGGMGCSAGIIAIDLARDMLQSNPNSYAVVVSTEMVGYNWYVGSDKSMVIPNCFFRMGCSAVML 315          
BLAST of CF834422 vs. ExPASy Swiss-Prot
Match: KCS5_ARATH (3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana GN=KCS5 PE=2 SV=1)

HSP 1 Score: 271.166 bits (692), Expect = 4.411e-72
Identity = 133/233 (57.08%), Postives = 174/233 (74.68%), Query Frame = 2
Query:   59 QDIVQLWNQLRYNLVTVTVCSSLMVFLGTLYFMSRPRKVYLVDFACYKPEPERQCTREIFMERSEQIGCFSEENLAFQKKILERSGLGQHTYFPEAVLRVPPNPCMAEARNEAEMVMFGAIDELLSKTGVKAKDIGILVVNCSLFCPTPSLSAMIVNHYKLRGNITSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVSNCLFRMGGAAILL 757
            ++I+ + N L + L+ +   S L++F+ T+YFMS+PR VYLVD++CYKP    +     FME S  I   + +++ FQ +ILERSGLG+ T  P A+  +PP P M  ARNEA+MV+F A+++L   TG+K KDI IL+VNCSLF PTPSLSAMI+N YKLR NI SYNL GMGCSA LIS+D+A+ LLQVHPNS A+++S E IT N+Y GN+R+ML+ NCLFRMGGAAILL
Sbjct:   46 EEILSVLNSLHFELLHILCSSFLIIFVSTVYFMSKPRTVYLVDYSCYKPPVTCRVPFSSFMEHSRLILKDNPKSVEFQMRILERSGLGEETCLPPAIHYIPPTPTMESARNEAQMVIFTAMEDLFKNTGLKPKDIDILIVNCSLFSPTPSLSAMIINKYKLRSNIKSYNLSGMGCSASLISVDVARDLLQVHPNSNAIIISTEIITPNYYKGNERAMLLPNCLFRMGGAAILL 278          
The following BLAST results are available for this feature:
BLAST of CF834422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
KCS11_ARATH2.651e-10175.863-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana... [more]
KCS19_ARATH5.000e-10075.003-ketoacyl-CoA synthase 19 OS=Arabidopsis thaliana... [more]
KCS17_ARATH1.608e-9874.253-ketoacyl-CoA synthase 17 OS=Arabidopsis thaliana... [more]
KCS4_ARATH1.237e-8265.093-ketoacyl-CoA synthase 4 OS=Arabidopsis thaliana ... [more]
KCS9_ARATH5.198e-8162.503-ketoacyl-CoA synthase 9 OS=Arabidopsis thaliana ... [more]
KCS1_ARATH4.554e-7759.753-ketoacyl-CoA synthase 1 OS=Arabidopsis thaliana ... [more]
KCS6_ARATH6.804e-7357.143-ketoacyl-CoA synthase 6 OS=Arabidopsis thaliana ... [more]
KCS2_ARATH2.586e-7257.33Probable 3-ketoacyl-CoA synthase 2 OS=Arabidopsis ... [more]
KCS10_ARATH2.586e-7256.093-ketoacyl-CoA synthase 10 OS=Arabidopsis thaliana... [more]
KCS5_ARATH4.411e-7257.083-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05I02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05I02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834422 ID=CF834422; Name=CF834422; organism=Citrus sinensis; type=EST; length=759bp
TTTACTGCTCCTATCTATTCTAATAATTTCTTCAGCTCATCTTTCAACTC
TCTCTTTTCAAGATATTGTCCAGCTATGGAACCAACTCAGGTACAATCTC
GTGACGGTCACCGTGTGTTCAAGCCTCATGGTGTTTTTGGGCACGCTTTA
TTTCATGAGCCGCCCGAGAAAAGTTTACTTGGTTGATTTTGCATGTTACA
AGCCGGAGCCCGAGCGGCAGTGCACTAGAGAAATTTTCATGGAGAGGTCG
GAGCAGATTGGTTGTTTTTCGGAAGAGAACTTGGCATTTCAGAAGAAAAT
TCTTGAACGGTCTGGTTTGGGGCAGCACACTTATTTCCCTGAGGCCGTGC
TGCGGGTCCCCCCGAACCCTTGTATGGCTGAGGCTAGGAATGAAGCTGAG
ATGGTCATGTTTGGTGCCATTGATGAGCTCTTGTCCAAAACTGGTGTAAA
GGCTAAAGATATAGGGATTCTTGTGGTGAATTGCAGCTTGTTCTGTCCAA
CACCATCTTTGTCGGCCATGATTGTGAATCATTACAAGCTTCGAGGCAAC
ATTACCAGCTATAATCTTGGCGGCATGGGTTGCAGTGCTGGACTTATTTC
AATAGACCTTGCTAAGCAGCTTTTACAGGTGCACCCCAACTCCTATGCCT
TGGTAGTGAGCATGGAGAACATAACACTCAACTGGTACTTTGGCAATGAC
AGGTCCATGCTTGTATCAAATTGCCTCTTCCGCATGGGTGGTGCCGCTAT
CCTTTTATC
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