CF834509

Overview
NameCF834509
Unique NameCF834509
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length760
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: AROD6_ARATH (Arogenate dehydratase/prephenate dehydratase 6, chloroplastic OS=Arabidopsis thaliana GN=ADT6 PE=1 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 4.844e-119
Identity = 209/239 (87.45%), Postives = 226/239 (94.56%), Query Frame = 1
Query:    1 LGGSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPS 717
            LGGS++RNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKE+LTRVISHPQ L+QCEHTLTKLGLNVAREAVDDTAGAAE+IA+N+LRDT         E+YG+++LEDGIQDD SNVTRFVMLAREPIIPRTDRPFKTSIVFAH+KGTSVLFKVLSAFAFR+ISLTKIESRP+ NRPIR+VDDANVGTAKHFEYMFY+DFEASMAE RAQNALAEVQEFTSFLRVLGSYPMDMTPWSP+
Sbjct:  170 LGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIASNNLRDTAAIASARAAEIYGLEILEDGIQDDVSNVTRFVMLAREPIIPRTDRPFKTSIVFAHEKGTSVLFKVLSAFAFRDISLTKIESRPNHNRPIRVVDDANVGTAKHFEYMFYVDFEASMAEARAQNALAEVQEFTSFLRVLGSYPMDMTPWSPT 408          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: AROD3_ARATH (Arogenate dehydratase 3, chloroplastic OS=Arabidopsis thaliana GN=ADT3 PE=1 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 3.471e-117
Identity = 207/239 (86.61%), Postives = 224/239 (93.72%), Query Frame = 1
Query:    1 LGGSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPS 717
            LGGS++RNYDLLLRHRLHIVGEVQLPVHHCL+ALPGVRKE+LTRVISHPQ L+QCEHTLTKLGLNVAREAVDDTAGAAE+IAAN++RDT         E+YG+++LEDGIQDD+SNVTRFVMLAREPIIPRTDRPFKTSIVFAH+KGT VLFKVLSAFAFRNISLTKIESRP+ N PIRLVD+ANVGTAKHFEYMFYIDFEASMAE RAQNAL+EVQEFTSFLRVLGSYPMDMT WSPS
Sbjct:  175 LGGSIHRNYDLLLRHRLHIVGEVQLPVHHCLIALPGVRKEFLTRVISHPQGLAQCEHTLTKLGLNVAREAVDDTAGAAEFIAANNIRDTAAIASARAAEIYGLEILEDGIQDDASNVTRFVMLAREPIIPRTDRPFKTSIVFAHEKGTCVLFKVLSAFAFRNISLTKIESRPNHNVPIRLVDEANVGTAKHFEYMFYIDFEASMAESRAQNALSEVQEFTSFLRVLGSYPMDMTSWSPS 413          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: AROD5_ARATH (Arogenate dehydratase 5, chloroplastic OS=Arabidopsis thaliana GN=ADT5 PE=1 SV=1)

HSP 1 Score: 368.622 bits (945), Expect = 2.045e-101
Identity = 186/239 (77.82%), Postives = 205/239 (85.77%), Query Frame = 1
Query:    1 LGGSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFA--HDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWS 711
            LGGS++RNYDLLLRHRLHIVGEVQ+PVHHCLLALPGVR + +TRVISHPQAL+Q E +L KL    A EA  DTA AAEYIAAN+L DT         ELYG+Q+L DGIQDD+ NVTRF+MLAR+PIIPRTDRPFKTSIVFA    KGTSVLFKVLSAFAFRNISLTKIESRPH+N P+R+V D NVGT+KHFEY FY+DFEASMAE RAQNALAEVQE+TSFLRVLGSYPMDMTPWS
Sbjct:  180 LGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCITRVISHPQALAQTEGSLNKLTPKAAIEAFHDTAAAAEYIAANNLHDTAAVASARAAELYGLQILADGIQDDAGNVTRFLMLARDPIIPRTDRPFKTSIVFAAQEHKGTSVLFKVLSAFAFRNISLTKIESRPHQNCPVRVVGDENVGTSKHFEYTFYVDFEASMAEARAQNALAEVQEYTSFLRVLGSYPMDMTPWS 418          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: AROD4_ARATH (Arogenate dehydratase 4, chloroplastic OS=Arabidopsis thaliana GN=ADT4 PE=1 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.325e-100
Identity = 185/244 (75.82%), Postives = 207/244 (84.84%), Query Frame = 1
Query:    1 LGGSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFA--HDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMTPWSPSRGE 726
            LGGS++RNYDLLLRHRLHIVGEVQ+PVHHCLLALPGVR + ++RVISHPQAL+Q EH+L  L  + AREA  DTA AAEYI+ANDL DT         ELY +Q+L DGIQDD  NVTRF+MLAREPIIPRTDRPFKTSIVFA    KGTSVLFKVLSAFAFR+ISLTKIESRPH NRP+R+V D + GT+K+FEYMFY+DFEASMAE RAQNALAEVQE+TSFLRVLGSYPMDMTPWS +  E
Sbjct:  179 LGGSIHRNYDLLLRHRLHIVGEVQIPVHHCLLALPGVRTDCVSRVISHPQALAQTEHSLDVLTPHAAREAFHDTAAAAEYISANDLHDTAAVASARAAELYNLQILADGIQDDPGNVTRFLMLAREPIIPRTDRPFKTSIVFAAQEHKGTSVLFKVLSAFAFRDISLTKIESRPHHNRPLRVVGDGSFGTSKNFEYMFYVDFEASMAEPRAQNALAEVQEYTSFLRVLGSYPMDMTPWSMTSTE 422          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: AROD1_ARATH (Arogenate dehydratase/prephenate dehydratase 1, chloroplastic OS=Arabidopsis thaliana GN=ADT1 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.517e-75
Identity = 136/233 (58.37%), Postives = 182/233 (78.11%), Query Frame = 1
Query:    1 LGGSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDM 699
            +GGS++RNYDLLLRHRLHIV EV LPV+HCLL +PGV+KE +  V+SHPQAL QC ++L  LG+   R +  DTA AA+ ++++   D           +YG+ +L + IQDD +NVTRF++LAREP+IPRTDRP+KTSIVF+ ++G  VLFK L+ FA R+I+L+KIESRP R RP+R+VD +N G+AK+F+Y+FYIDFEASMA+ RAQ+AL  +QEF SF+R+LG YPMD+
Sbjct:  160 VGGSIHRNYDLLLRHRLHIVQEVHLPVNHCLLGVPGVKKEDIKCVLSHPQALDQCVNSLNNLGIQ--RISAKDTATAAQTVSSSGKIDVGAIASVRAANIYGLDILAENIQDDVNNVTRFLILAREPMIPRTDRPYKTSIVFSLEEGPGVLFKALAVFALRSINLSKIESRPQRRRPLRVVDGSNNGSAKYFDYLFYIDFEASMADTRAQHALGHLQEFASFIRILGCYPMDL 390          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: AROD2_ARATH (Arogenate dehydratase/prephenate dehydratase 2, chloroplastic OS=Arabidopsis thaliana GN=ADT2 PE=1 SV=1)

HSP 1 Score: 275.404 bits (703), Expect = 2.356e-73
Identity = 145/234 (61.97%), Postives = 175/234 (74.79%), Query Frame = 1
Query:    1 LGGSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDMT 702
            LGGS++RNYDLLLRH LHIVGEV+L V HCLLA  GV  E L RV+SHPQAL+QCE+TLTKLGL   REAVDDTAGAA+ IA  +L D          ++YG+ ++   IQDD  NVTRF+MLAREPIIP T+R FKTSIVF+ ++G  VLFK L+ FA R I+LTKIESRP R  P+R       G  K+F+Y+FY+DFEASMA+  AQNAL  ++EF +FLRVLGSYP+D T
Sbjct:  153 LGGSIHRNYDLLLRHNLHIVGEVKLAVRHCLLANHGVNIEDLRRVLSHPQALAQCENTLTKLGL--VREAVDDTAGAAKQIAFENLNDAAAVASEKAAKIYGLNIVAKDIQDDCDNVTRFLMLAREPIIPGTNRLFKTSIVFSLEEGPGVLFKALAVFALRQINLTKIESRPLRKHPLRA-----SGGLKYFDYLFYVDFEASMADEVAQNALRHLEEFATFLRVLGSYPVDTT 379          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_ENTAG (P-protein OS=Enterobacter agglomerans GN=pheA PE=4 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.954e-27
Identity = 80/239 (33.47%), Postives = 115/239 (48.12%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMD-MTPWSPSR 720
            GS+   YDLL +  L IVGE+ LP+ HC+L       + +  V SHPQ   QC   + +   +   E  + TA A E +AA +             ELY +QVLE  + +   N TRF++LAR+ I      P KT+++ A  +    L   L      N+ ++K+ESRP    P              +E MFYID + ++   R Q AL E+Q  T  L+VLG YP + + P  P R
Sbjct:  164 GSINDVYDLLQQTSLSIVGELTLPIDHCVLVNGPTDLQQIETVYSHPQPFQQCSQFINRFP-HWKIEYTESTAAAMEKVAALNSPKVAALGSEAGGELYQLQVLERNLANQQQNHTRFIVLARKAIEVSDQVPAKTTLIMATGQQAGALVDALLVLRQHNLIMSKLESRPINGNP--------------WEEMFYIDVQGNLQSERMQQALQELQTMTRSLKVLGCYPSENVVPAEPGR 387          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_METJA (Prephenate dehydratase OS=Methanocaldococcus jannaschii GN=pheA PE=1 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.685e-27
Identity = 79/231 (34.20%), Postives = 129/231 (55.84%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHR-LHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVF-AHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPM 693
            GS+    DLLL+ + + I+GE+ L +HH L+   G  K  +  VISHPQAL+QC + + K G +V  +AV+ TA A + +A +              E Y +++L++ I+D  +N TRF+++ ++       + +K SIVF   +     L+ +L  FA RNI+LT+IESRP + R         +GT     Y+FYIDFE +  + + +  L  ++  T+F+ +LG YP+
Sbjct:   61 GSVSLTQDLLLQFKDIKILGELALDIHHNLI---GYDKNKIKTVISHPQALAQCRNYIKKHGWDV--KAVESTAKAVKIVAESKDETLGAIGSKESAEHYNLKILDENIEDYKNNKTRFILIGKKVKFKYHPKNYKVSIVFELKEDKPGALYHILKEFAERNINLTRIESRPSKKR---------LGT-----YIFYIDFENN--KEKLEEILKSLERHTTFINLLGKYPV 270          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_HAEIN (P-protein OS=Haemophilus influenzae GN=pheA PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.185e-24
Identity = 65/231 (28.14%), Postives = 117/231 (50.65%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMDM 699
            G++   YDLL    L +VGE+  P+ HC+L         +  + SHPQ + QC   +  L   V  E  + ++ A + +A+ +  +          +LYG+ VL+  I +  +N+TRF+++A+EP    +  P KT ++    +    L   L  F    I++TK+ESRP   +P              +E MFY++ EA++     + AL E++ ++++L++LG YP ++
Sbjct:  164 GAINEVYDLLQHTDLSLVGELAYPIKHCVLVNDKTDLNQIDTLYSHPQVIQQCSQFIHSLD-RVHIEYCESSSHAMQLVASLNKPNIAALGNEDGGKLYGLSVLKTNIANQENNITRFIVVAKEPREVSSQIPTKTLLLMTTSQQAGALVDALLVFKKHQINMTKLESRPIYGKP--------------WEEMFYLEIEANIHHPDTKQALEELKNYSNYLKILGCYPSEI 379          
BLAST of CF834509 vs. ExPASy Swiss-Prot
Match: PHEA_SHIFL (P-protein OS=Shigella flexneri GN=pheA PE=3 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 5.883e-24
Identity = 76/238 (31.93%), Postives = 110/238 (46.22%), Query Frame = 1
Query:    7 GSLYRNYDLLLRHRLHIVGEVQLPVHHCLLALPGVRKEYLTRVISHPQALSQCEHTLTKLGLNVAREAVDDTAGAAEYIAANDLRDTXXXXXXXXXELYGMQVLEDGIQDDSSNVTRFVMLAREPIIPRTDRPFKTSIVFAHDKGTSVLFKVLSAFAFRNISLTKIESRPHRNRPIRLVDDANVGTAKHFEYMFYIDFEASMAEVRAQNALAEVQEFTSFLRVLGSYPMD-MTPWSPS 717
            G++   YDLL    L IVGE+ L + HCLL         +  V SHPQ   QC   L +   +   E  + T+ A E +A                 LYG+QVLE    +   N TRFV+LAR+ I      P KT+++ A  +    L + L      N+ +T++ESRP    P              +E MFY+D +A++     Q AL E+ E T  ++VLG YP + + P  P+
Sbjct:  164 GAINDVYDLLQHTSLSIVGEMTLTIDHCLLVSGTTDLSTINTVYSHPQPFQQCSKFLNRYP-HWKIEYTESTSAAMEKVAQAKSPHVAALGSEAGGTLYGLQVLERIEANQRQNFTRFVVLARKAINVSDQVPAKTTLLMATGQQAGALVEALLVLRNHNLIMTRLESRPIHGNP--------------WEEMFYLDIQANLESAEMQKALKELGEITRSMKVLGCYPSENVVPVDPT 386          
The following BLAST results are available for this feature:
BLAST of CF834509 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 28
Match NameE-valueIdentityDescription
AROD6_ARATH4.844e-11987.45Arogenate dehydratase/prephenate dehydratase 6, ch... [more]
AROD3_ARATH3.471e-11786.61Arogenate dehydratase 3, chloroplastic OS=Arabidop... [more]
AROD5_ARATH2.045e-10177.82Arogenate dehydratase 5, chloroplastic OS=Arabidop... [more]
AROD4_ARATH1.325e-10075.82Arogenate dehydratase 4, chloroplastic OS=Arabidop... [more]
AROD1_ARATH2.517e-7558.37Arogenate dehydratase/prephenate dehydratase 1, ch... [more]
AROD2_ARATH2.356e-7361.97Arogenate dehydratase/prephenate dehydratase 2, ch... [more]
PHEA_ENTAG1.954e-2733.47P-protein OS=Enterobacter agglomerans GN=pheA PE=4... [more]
PHEA_METJA5.685e-2734.20Prephenate dehydratase OS=Methanocaldococcus janna... [more]
PHEA_HAEIN1.185e-2428.14P-protein OS=Haemophilus influenzae GN=pheA PE=4 S... [more]
PHEA_SHIFL5.883e-2431.93P-protein OS=Shigella flexneri GN=pheA PE=3 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834509 ID=CF834509; Name=CF834509; organism=Citrus sinensis; type=EST; length=760bp
CTAGGCGGATCTCTCTACCGGAACTACGACCTCCTCCTCCGCCACCGGCT
TCACATCGTCGGAGAAGTTCAGCTCCCGGTTCACCACTGTCTCTTGGCCT
TGCCTGGCGTCCGCAAAGAGTACCTCACGCGCGTGATTTCACATCCGCAG
GCGCTCTCCCAGTGCGAGCACACTCTGACGAAGCTAGGGCTCAACGTCGC
ACGGGAGGCCGTCGACGACACGGCCGGAGCTGCCGAGTACATCGCCGCCA
ATGACCTCCGCGACACCGCGGCAATAGCCTCCGCACGCGCCGCCGAATTG
TACGGAATGCAAGTCCTGGAGGATGGGATACAGGACGATTCGAGTAACGT
GACTCGGTTCGTGATGTTGGCGCGTGAGCCGATAATCCCGCGCACGGATC
GGCCGTTCAAGACGAGTATCGTGTTCGCGCACGACAAGGGGACGAGTGTG
TTGTTTAAGGTGTTGTCGGCGTTCGCGTTCAGGAACATAAGTTTGACGAA
GATAGAGTCGCGGCCGCACCGGAACCGCCCGATCAGGCTGGTTGACGATG
CGAATGTGGGGACGGCCAAGCACTTCGAGTACATGTTTTACATTGATTTC
GAAGCCTCGATGGCTGAGGTTAGGGCGCAGAATGCGCTGGCGGAGGTCCA
GGAATTCACGTCGTTTTTGAGGGTGTTGGGGAGTTATCCTATGGACATGA
CCCCATGGAGCCCGTCTAGGGGAGAATAATGAACATAAAATTATTAGCTA
TTTTATTTTA
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