CF834510

Overview
NameCF834510
Unique NameCF834510
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length554
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 1.566e-55
Identity = 102/145 (70.34%), Postives = 113/145 (77.93%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKP  +Q NMV AQGRT PNQ  GTSIQ C++IAS DLEPV    ++YLGRPWK++SR VVMQS +  HIDP+GW EW GDFALK LYYGE++N GPGAGTSKRVKWPGY VI  P EA  F VAELI GGSWL ST VAY EGL
Sbjct:  398 RKPNKRQKNMVTAQGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 4.556e-55
Identity = 102/145 (70.34%), Postives = 115/145 (79.31%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RK M  Q N + AQGRT PNQN GTSIQ CE+ AS+DLEPV+ + +SYLGRPWKEYSR VVM+S I D IDPAGW EW  DFALK L+YGEY N GPG+GTS+RVKWPGY VI +PE A++F VAELI GGSWL STGV YT GL
Sbjct:  399 RKQMKGQENTITAQGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 212.231 bits (539), Expect = 1.326e-54
Identity = 102/145 (70.34%), Postives = 114/145 (78.62%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKP   Q NMV AQGRT PNQ  GTSIQ C +IASSDLEPV     +YLGRPWKEYSR VVM+S +G  I+PAGW+EW GDFALK LYYGE++N GPGAGTSKRVKWPGY VI  P +A  F VA+LI GGSWL+STGVAY +GL
Sbjct:  400 RKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 5.038e-54
Identity = 101/145 (69.66%), Postives = 113/145 (77.93%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKP   Q NMV AQGRT PNQ  GTSIQ C +IASSDLEPV     +YLGRPWK+YSR VVM+S +G  I+PAGW+EW GDFALK LYYGE++N GPGAGTSKRVKWPGY  I  P EA  F VA+LI GGSWL+STGVAY +GL
Sbjct:  404 RKPGKYQQNMVTAQGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 207.608 bits (527), Expect = 3.265e-53
Identity = 99/145 (68.28%), Postives = 113/145 (77.93%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKP   Q NMV AQGRT PNQ  GTSIQ C++IAS DL+PV     +YLGRPWK+YSR VVM+S +G  IDP+GW+EW GDFALK LYYGE++N GPGAGTSKRVKWPGY VI  P EA  F VA+LI GGSWL+ST VAY +GL
Sbjct:  404 RKPGKYQQNMVTAQGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 189.119 bits (479), Expect = 1.202e-47
Identity = 90/145 (62.07%), Postives = 107/145 (73.79%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            R P + Q NM+ AQGR   NQN   SIQKC++ ASSDL PVKGS++++LGRPWK YSR V+MQS I +HIDPAGW  W G+FAL  LYYGEY N GPGA TSKRV W G+ VI   +EA++F VA+LI GG WLK TGV + E L
Sbjct:  413 RNPGAGQKNMLTAQGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTFQEWL 557
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 3.866e-46
Identity = 86/145 (59.31%), Postives = 104/145 (71.72%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKPM++Q   + AQ R  PNQN G SI  C+++A+ DLE  KGS  +YLGRPWK YSR V M S +GDHIDP GW EW+G FAL  LYYGEY+N+G G+G  +RVKWPGY VI +  EA KF VA+ I G SWL STGV++  GL
Sbjct:  441 RKPMAQQKITITAQNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 8.613e-46
Identity = 88/145 (60.69%), Postives = 103/145 (71.03%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            R+P S Q NMV AQGRT PNQN G  IQKC + A+SDL+ VKGS  +YLGRPWKEYS+ V+MQS I D I P GWSEW+G FAL  L Y EY N G GAGT+ RVKW G+ VI A  EA+K+   + IGGG WL STG  ++ GL
Sbjct:  448 RRPNSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 1.244e-44
Identity = 87/145 (60.00%), Postives = 102/145 (70.34%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            R+P S Q NMV AQGRT PNQN G  IQKC + A+SDL PV+ S  +YLGRPWKEYSR V+MQS I D I PAGW EW+G+FAL  L+YGEY N G GA TS RVKW G+ VI +  EA+ +     I GGSWL STG  ++ GL
Sbjct:  439 RRPGSGQKNMVTAQGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583
[Close]
BLAST of CF834510 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 178.718 bits (452), Expect = 1.624e-44
Identity = 88/145 (60.69%), Postives = 102/145 (70.34%), Query Frame = -3 
Query:  118 RKPMSKQSNMVPAQGRTAPNQNPGTSIQKCEVIASSDLEPVKGSIRSYLGRPWKEYSRPVVMQSPIGDHIDPAGWSEWSGDFALKPLYYGEYLNRGPGAGTSKRVKWPGYPVIPAPEEAKKFPVAELIGGGSWLKSTGVAYTEGL 552
            RKP S Q NMV AQGRT PNQN G  IQK  + A+SDL+PV+GS  +YLGRPWKEYSR V+MQS I D I PAGW EW G+FAL  L+YGE+ N G GAGTS RVKW G+ VI +  EA+ F     I G SWL STG  ++ GL
Sbjct:  440 RKPNSGQKNMVTAQGRTDPNQNTGIVIQKSRIGATSDLKPVQGSFPTYLGRPWKEYSRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584
The following BLAST results are available for this feature:
BLAST of CF834510 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PME3_SOLLC1.566e-5570.34Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME1_FICAW4.556e-5570.34Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME1_SOLLC1.326e-5470.34Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME22_SOLLC5.038e-5469.66Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME21_SOLLC3.265e-5368.28Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME18_ARATH1.202e-4762.07Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME61_ARATH3.866e-4659.31Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_ARATH8.613e-4660.69Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PMEU1_SOLLC1.244e-4460.00Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME1_CITSI1.624e-4460.69Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834510 ID=CF834510; Name=CF834510; organism=Citrus sinensis; type=EST; length=554bp
TTTTTTTTTTTTTTTTTAAGAACCTAGAACAGCACGTTACTCGGATTCAT
TCATTATTCAACTGATAAAAAGCAGGGGCAAATACAAGCTTAAAAGATAT
ATGCTGAGCTGACATCACAGCCCCTCAGTATAAGCAACTCCAGTTGATTT
CAACCACGACCCTCCTCCGATAAGCTCAGCTACTGGAAATTTTTTTGCTT
CTTCTGGGGCTGGAATAACGGGATAGCCAGGCCATTTCACTCTTTTGCTA
GTCCCAGCACCTGGCCCTCTATTCAAATACTCCCCATAATACAGGGGCTT
CAGGGCAAAATCTCCACTCCATTCTGACCATCCAGCTGGATCGATATGAT
CCCCGATGGGGGACTGCATTACAACTGGTCTCGAGTATTCTTTCCAAGGG
CGGCCCAAGTACGAACGGATCGAGCCCTTTACGGGCTCCAGATCTGAGCT
TGCTATGACTTCACATTTTTGGATCGAAGTCCCTGGGTTTTGATTTGGGG
CAGTCCGTCCTTGGGCTGGGACCATGTTGGATTGCTTGCTCATGGGCTTT
CTGG
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