CF834512

Overview
NameCF834512
Unique NameCF834512
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length471
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 1.569e-51
Identity = 94/132 (71.21%), Postives = 109/132 (82.58%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQNTGTSIQ CE+ AS+ LEPV+D+ +SYLGRPWKEYS TVVM+S+I D IDP GW +W  DFALKTL+YGEY N GP +GT++R+KW GYHVIT PE A++FTV ELI GGS L STGV YT GL
Sbjct:  412 QGRTDPNQNTGTSIQNCEIFASADLEPVEDTFKSYLGRPWKEYSRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME3_SOLLC (Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 5.961e-51
Identity = 92/132 (69.70%), Postives = 107/132 (81.06%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQ TGTSIQ C++IAS  LEPV +  ++YLGRPWK++S TVVMQS++  HIDP GW +W GDFALKTLYYGE++N GP AGT+KR+KW GYHVITDP +A  FTV ELI GGS L ST VAY EGL
Sbjct:  411 QGRTDPNQATGTSIQFCDIIASPDLEPVMNEYKTYLGRPWKKHSRTVVMQSYLDGHIDPSGWFEWRGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPNEAMPFTVAELIQGGSWLNSTSVAYVEGL 542          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME1_SOLLC (Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9 PE=1 SV=5)

HSP 1 Score: 198.364 bits (503), Expect = 1.328e-50
Identity = 92/132 (69.70%), Postives = 108/132 (81.82%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQ TGTSIQ C +IASS LEPV     +YLGRPWKEYS TVVM+S++G  I+P GW++W GDFALKTLYYGE++N GP AGT+KR+KW GYHVITDP +A  FTV +LI GGS L+STGVAY +GL
Sbjct:  413 QGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKEYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAKAMPFTVAKLIQGGSWLRSTGVAYVDGL 544          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME22_SOLLC (Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2.2 PE=3 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 1.124e-49
Identity = 90/132 (68.18%), Postives = 107/132 (81.06%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQ TGTSIQ C +IASS LEPV     +YLGRPWK+YS TVVM+S++G  I+P GW++W GDFALKTLYYGE++N GP AGT+KR+KW GYH ITDP +A  FTV +LI GGS L+STGVAY +GL
Sbjct:  417 QGRTDPNQATGTSIQFCNIIASSDLEPVLKEFPTYLGRPWKKYSRTVVMESYLGGLINPAGWAEWDGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHCITDPAEAMPFTVAKLIQGGSWLRSTGVAYVDGL 548          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME21_SOLLC (Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2.1 PE=2 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 3.271e-49
Identity = 89/132 (67.42%), Postives = 107/132 (81.06%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQ TGTSIQ C++IAS  L+PV     +YLGRPWK+YS TVVM+S++G  IDP GW++W GDFALKTLYYGE++N GP AGT+KR+KW GYHVITDP +A  FTV +LI GGS L+ST VAY +GL
Sbjct:  417 QGRTDPNQATGTSIQFCDIIASPDLKPVVKEFPTYLGRPWKKYSRTVVMESYLGGLIDPSGWAEWHGDFALKTLYYGEFMNNGPGAGTSKRVKWPGYHVITDPAEAMSFTVAKLIQGGSWLRSTDVAYVDGL 548          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 171.014 bits (432), Expect = 2.271e-42
Identity = 80/132 (60.61%), Postives = 98/132 (74.24%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGR D NQNT  SIQKC++ ASS L PVK S++++LGRPWK YS TV+MQS I +HIDP GW  W G+FAL TLYYGEY N GP A T+KR+ W G+ VI D ++A++FTV +LI GG  LK TGV + E L
Sbjct:  426 QGREDQNQNTAISIQKCKITASSDLAPVKGSVKTFLGRPWKLYSRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTFQEWL 557          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME2_CITSI (Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE=2 SV=1)

HSP 1 Score: 163.696 bits (413), Expect = 3.625e-40
Identity = 72/132 (54.55%), Postives = 94/132 (71.21%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQ+TG  I  C V A+S L+PV+ S++++LGRPWK+YS TV +++ +   I+P GW +WSGDFAL TLYY EY+N GP + T  R+KW GYHV+T P Q  +FTV   I G S L +T V +T GL
Sbjct:  379 QGRTDPNQSTGIIIHNCRVTAASDLKPVQSSVKTFLGRPWKQYSRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 510          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.350e-39
Identity = 75/132 (56.82%), Postives = 93/132 (70.45%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            Q R DPNQNTG SI  C+++A+  LE  K S  +YLGRPWK YS  V M S +GDHIDP GW +W+G FAL +LYYGEY+N+G  +G  +R+KW GYHVIT   +A KFTV + I G S L STGV++  GL
Sbjct:  454 QNRKDPNQNTGISIHACKLLATPDLEASKGSYPTYLGRPWKLYSRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 2.350e-39
Identity = 78/132 (59.09%), Postives = 93/132 (70.45%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQNTG  IQKC + A+S L+ VK S  +YLGRPWKEYS TV+MQS I D I P GWS+W+G FAL TL Y EY N G  AGT  R+KW G+ VIT   +A+K+T  + IGGG  L STG  ++ GL
Sbjct:  461 QGRTDPNQNTGIVIQKCRIGATSDLQSVKGSFPTYLGRPWKEYSQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
BLAST of CF834512 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 1.523e-38
Identity = 76/132 (57.58%), Postives = 93/132 (70.45%), Query Frame = 3
Query:    3 QGRTDPNQNTGTSIQKCEVIASSYLEPVKDSIRSYLGRPWKEYSTTVVMQSHIGDHIDPPGWSQWSGDFALKTLYYGEYLNRGPCAGTTKRMKWAGYHVITDPEQAKKFTVTELIGGGSGLKSTGVAYTEGL 398
            QGRTDPNQNTG  IQKC + A+S L PV+ S  +YLGRPWKEYS TV+MQS I D I P GW +W+G+FAL TL+YGEY N G  A T+ R+KW G+ VIT   +A+ +T    I GGS L STG  ++ GL
Sbjct:  452 QGRTDPNQNTGIVIQKCRIGATSDLRPVQKSFPTYLGRPWKEYSRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
The following BLAST results are available for this feature:
BLAST of CF834512 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PME1_FICAW1.569e-5171.21Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME3_SOLLC5.961e-5169.70Pectinesterase 3 OS=Solanum lycopersicum GN=PME3 P... [more]
PME1_SOLLC1.328e-5069.70Pectinesterase 1 OS=Solanum lycopersicum GN=PME1.9... [more]
PME22_SOLLC1.124e-4968.18Pectinesterase 2.2 OS=Solanum lycopersicum GN=PME2... [more]
PME21_SOLLC3.271e-4967.42Pectinesterase 2.1 OS=Solanum lycopersicum GN=PME2... [more]
PME18_ARATH2.271e-4260.61Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME2_CITSI3.625e-4054.55Pectinesterase 2 OS=Citrus sinensis GN=PECS-2.1 PE... [more]
PME61_ARATH2.350e-3956.82Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME3_ARATH2.350e-3959.09Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PMEU1_SOLLC1.523e-3857.58Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834512 ID=CF834512; Name=CF834512; organism=Citrus sinensis; type=EST; length=471bp
CCCAAGGACGGACTGACCCAAATCAAAACACAGGGACTTCTATCCAAAAA
TGTGAAGTCATAGCAAGCTCATATCTGGAGCCCGTAAAGGACTCGATCCG
TTCTTACTTGGGCCGGCCTTGGAAAGAATACTCAACAACAGTTGTAATGC
AGTCACACATCGGGGATCATATCGATCCACCTGGATGGTCACAATGGAGT
GGAGATTTTGCACTGAAGACACTGTATTATGGGGAGTATCTGAATAGAGG
GCCATGCGCTGGGACTACCAAAAGAATGAAATGGGCTGGCTATCACGTTA
TTACAGACCCAGAACAAGCAAAAAAATTTACAGTAACTGAGCTTATCGGA
GGAGGGTCGGGGTTGAAATCAACTGGAGTTGCTTATACTGAGGGGCTGTG
ATGTCATCTCACCATATATCTTTTAAGCTTGTATTTGCCACTGCTTTCTA
TCAGTAGAATAATGAATGAAT
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