CF834514

Overview
NameCF834514
Unique NameCF834514
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length601
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS2_CITSI (Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.151e-12
Identity = 36/37 (97.30%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGPADTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSY_VIGUN (Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  179 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 215
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSY_MALDO (Chalcone synthase (Fragment) OS=Malus domestica GN=CHS PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:   21 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 57
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214
[Close]
BLAST of CF834514 vs. ExPASy Swiss-Prot
Match: CHS7_SOYBN (Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.565e-12
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 2 
Query:  446 AENNKGARVLVGCSEITAVTFRGPADTHLDSLVGQAL 556
            AENNKGARVLV CSEITAVTFRGP+DTHLDSLVGQAL
Sbjct:  178 AENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQAL 214
The following BLAST results are available for this feature:
BLAST of CF834514 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 92
Match NameE-valueIdentityDescription
CHS2_CITSI1.151e-1297.30Chalcone synthase 2 OS=Citrus sinensis GN=CHS2 PE=... [more]
CHSY_VIGUN2.565e-1294.59Chalcone synthase OS=Vigna unguiculata GN=CHS PE=2... [more]
CHSY_PUELO2.565e-1294.59Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSY_PHAVU2.565e-1294.59Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHSY_PERAE2.565e-1294.59Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]
CHSY_MALDO2.565e-1294.59Chalcone synthase (Fragment) OS=Malus domestica GN... [more]
CHSY_HYDMC2.565e-1294.59Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSB_PEA2.565e-1294.59Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHSA_PEA2.565e-1294.59Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS7_SOYBN2.565e-1294.59Chalcone synthase 7 OS=Glycine max GN=CHS7 PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05K13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834514 ID=CF834514; Name=CF834514; organism=Citrus sinensis; type=EST; length=601bp
CGAGTTTTTTTCTTTTAATTATTAACAAATGTCTGGATCTTGATATATAT
ACCTCGGATCAGACGGATATACTTTAAGCTTACATATCACATATGTTAAA
ACTGCAAAAAACTTGAAAAAAGCTAACCGATTATTCAAAACACGACCCAA
AATAAAAGAACTCTTAAAAACTTATAACCGACTTATCAAAAGTGAAGAAA
GGCTAACACAAAACCGACTTGATTAACTGACATTATCCTAAAATTAAAGA
AGCATGAAATGAAATTGTAGAAATATCAAGGGTGAAGTAGGCCACCACCA
CAGTTACTGCCACTTCCACCCCCGAGACCCCCTCCGGCACCTCCACCAAA
TCCGCCACCAGCGCCGCCACCGATACCACTGACAAGGCCACCACCTGAAC
CACCGCCGAGGCCACCTCCGGCACCGCCTCCGAGGCCCCCGCTTGGCTGA
GAACAACAAGGGCGCTCGCGTTCTTGTTGGCTGTTCGGAGATCACGGCAG
TCACTTTCCGCGGCCCTGCCGATACTCATCTTGATTCTCTTGTGGGCCAG
GCTTTGATCGGTGATGGTGCTGCTGCTGTGATCGTGGGTGCCGATCCTGA
C
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