CF834529

Overview
NameCF834529
Unique NameCF834529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length494
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7034 contig Csv1_Contig7034:1094..1587. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF834529 vs. ExPASy Swiss-Prot
Match: PAPA5_CARPA (Cysteine proteinase (Fragment) OS=Carica papaya PE=3 SV=1)

HSP 1 Score: 66.2402 bits (160), Expect = 8.965e-11
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = -2 
Query:  410 IIKNSWGENWGENGYYKICMGRNVCGVD 493
            +IKNSWGENWGENGYYKIC GRN+CGVD
Sbjct:   55 VIKNSWGENWGENGYYKICRGRNICGVD 82
The following BLAST results are available for this feature:
BLAST of CF834529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PAPA5_CARPA8.965e-1189.29Cysteine proteinase (Fragment) OS=Carica papaya PE... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05K24_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834529 ID=CF834529; Name=CF834529; organism=Citrus sinensis; type=EST; length=494bp
TTTTTTTTAGACCTATCTTCAAATATAATAAGAAAATACAAGCGTCTAAG
CATCCTTTGAAGTTCTACTATTTTGAGTTACATAAAAAGAAAATATAACA
TTATAATATTTCTACAAGCCTGCCCAATATAAAAAGAAAATATTAATACC
ATCTTCAATAACAATTCTGTAGCATGGTTAACTATAAAATGGATAAATAT
TACATTCTGACATGACATATGCTTAAATATTACAAGAGCATATAAAGTTC
ATGCCTCAGCCCACGCATGTAGGCATCCTTATAATTGCAGACGGCTATTT
AAAAGGATATCCTATAATATCTTCGTATATAAGCTCCACTTGCCTAGCAC
AACCTCCATAATGTCTAGCTTGAGGTTGTATGGACAGCAGCTACAGATGA
GACCATGGAGTCGACCCCACAGACATTGCGACCCATGCAGATCTTATAAT
ATCCATTCTCTCCCCAGTTCTCTCCCCAGGAGTTCTTTATGATC
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