CF834603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL172_ARATH (60S ribosomal protein L17-2 OS=Arabidopsis thaliana GN=RPL17B PE=2 SV=2) HSP 1 Score: 149.443 bits (376), Expect = 1.535e-35 Identity = 72/81 (88.89%), Postives = 74/81 (91.36%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAKNTHPNGQ 667 MVKYS+EPDN TKSCKARGSDLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPFT FC GVGRTA AKN H NGQ Sbjct: 1 MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQ 81
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL171_ARATH (60S ribosomal protein L17-1 OS=Arabidopsis thaliana GN=RPL17A PE=1 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 4.467e-35 Identity = 71/81 (87.65%), Postives = 74/81 (91.36%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAKNTHPNGQ 667 MVKYS+EPDN TKSCKARG+DLRVHFKNTRETAHAIRKLPL KAKRYLEDV+AHKQAIPFT FC GVGRTA AKN H NGQ Sbjct: 1 MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPFTRFCRGVGRTAQAKNRHSNGQ 81
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_MAIZE (60S ribosomal protein L17 OS=Zea mays GN=RPL17 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 4.622e-32 Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAKNTHPNGQ 667 MVKYS+EP NPTKS KA G DLRVHFKNTRETA A+RKLPLTKAKRYLEDV+AHKQAIPF +CGGVGRTA AK+ H NGQ Sbjct: 1 MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPFRRYCGGVGRTAQAKSRHSNGQ 81
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL171_HORVU (60S ribosomal protein L17-1 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 7.380e-30 Identity = 62/81 (76.54%), Postives = 67/81 (82.72%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAKNTHPNGQ 667 MVKYS +P NPTKS KA G DLRVHFKNTRETA A+RK+PL KAKRYLEDV+AHKQAIPF +C GVGRTA KN PNGQ Sbjct: 1 MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQ 81
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL172_HORVU (60S ribosomal protein L17-2 OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.183 bits (326), Expect = 9.638e-30 Identity = 61/81 (75.31%), Postives = 68/81 (83.95%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAKNTHPNGQ 667 MVKYS++P NPTKS KA G DLRVHFKNTRETA A+R++PL KAKRYLEDV+AHKQAIPF +C GVGRTA KN PNGQ Sbjct: 1 MVKYSRDPSNPTKSAKACGKDLRVHFKNTRETAFALRRMPLGKAKRYLEDVLAHKQAIPFRRYCRGVGRTAQVKNRQPNGQ 81
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_PODCA (60S ribosomal protein L17 OS=Podocoryne carnea GN=RPL17 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.922e-23 Identity = 53/74 (71.62%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 M KYS +P+NP KSCKARGS LRVHFKNTRETA AI+K+ + KA RYL+DV+A KQ IPF FCGGVGR A AK Sbjct: 1 MGKYSIDPENPIKSCKARGSYLRVHFKNTRETAQAIKKMHIRKAYRYLKDVIAKKQIIPFRRFCGGVGRKAQAK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_BOMMO (60S ribosomal protein L17 OS=Bombyx mori GN=RpL17 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.320e-22 Identity = 51/74 (68.92%), Postives = 60/74 (81.08%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 M +YS+EPDNP KSCKARGS+LRVHFKNT ETA AIRK+PL +A RYL++V+ K+ IPF F GGVGR A AK Sbjct: 1 MGRYSREPDNPAKSCKARGSNLRVHFKNTYETAMAIRKMPLRRAVRYLKNVIEKKECIPFRRFNGGVGRCAQAK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_SUBDO (60S ribosomal protein L17 OS=Suberites domuncula GN=RPL17 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 9.660e-22 Identity = 51/75 (68.00%), Postives = 57/75 (76.00%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAKN 649 M +Y+ EP+NP KSCKARG DLRVHFKNTRETA AI+ + L KA RYL DV+ KQ IPF F GGVGR A AKN Sbjct: 1 MGRYAIEPENPAKSCKARGEDLRVHFKNTRETAQAIKGMHLKKALRYLNDVIEKKQIIPFRRFSGGVGRKAQAKN 75
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_ARGMO (60S ribosomal protein L17 OS=Argas monolakensis GN=RpL17 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21 Identity = 49/74 (66.22%), Postives = 61/74 (82.43%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAK 646 M +YS EPDN TKSCKARGS+LRVHFKNTRETA AI+++ L +A+RYL++V+A K+ +PF F GGVGR A AK Sbjct: 1 MGRYSVEPDNATKSCKARGSNLRVHFKNTRETAQAIKRMSLRRAQRYLKNVIAKKEIVPFRRFNGGVGRKAQAK 74
BLAST of CF834603 vs. ExPASy Swiss-Prot
Match: RL17_AEDAL (60S ribosomal protein L17 OS=Aedes albopictus GN=RpL17 PE=2 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21 Identity = 47/75 (62.67%), Postives = 62/75 (82.67%), Query Frame = 2 Query: 425 MVKYSKEPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLTKAKRYLEDVMAHKQAIPFTPFCGGVGRTAPAKN 649 M +Y+KEPDNP KSCKARGS+LRVHFKNTRETA AI+++PL +A+++L++V K+ +PF F GGVGR A AK+ Sbjct: 1 MGRYAKEPDNPAKSCKARGSNLRVHFKNTRETALAIKRMPLRRAQKFLKNVCEKKECVPFRRFNGGVGRCAQAKH 75 The following BLAST results are available for this feature:
BLAST of CF834603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 41
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834603 ID=CF834603; Name=CF834603; organism=Citrus sinensis; type=EST; length=667bpback to top |