CF834604
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS28_MAIZE (40S ribosomal protein S28 OS=Zea mays GN=RPS28 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.482e-14 Identity = 37/40 (92.50%), Postives = 38/40 (95.00%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +VMGRTGSRGQVTQVRVKFLDDQNR IMRNVKGPV EGDI Sbjct: 12 KVMGRTGSRGQVTQVRVKFLDDQNRLIMRNVKGPVCEGDI 51
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS282_ARATH (40S ribosomal protein S28-2 OS=Arabidopsis thaliana GN=RPS28C PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.143e-11 Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +VMGRTGSRGQVTQVRVKF D +RFIMRNVKGPVREGD+ Sbjct: 12 KVMGRTGSRGQVTQVRVKF-TDSDRFIMRNVKGPVREGDV 50
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS28_ICTPU (40S ribosomal protein S28 OS=Ictalurus punctatus GN=rps28 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11 Identity = 30/40 (75.00%), Postives = 37/40 (92.50%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +V+GRTGS+GQ TQVRV+F+DD NR I+RNVKGPVREGD+ Sbjct: 16 KVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDV 55
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS28_DANRE (40S ribosomal protein S28 OS=Danio rerio GN=rps28 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11 Identity = 30/40 (75.00%), Postives = 37/40 (92.50%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +V+GRTGS+GQ TQVRV+F+DD NR I+RNVKGPVREGD+ Sbjct: 16 KVLGRTGSQGQCTQVRVEFMDDSNRSIIRNVKGPVREGDV 55
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS281_ARATH (40S ribosomal protein S28-1 OS=Arabidopsis thaliana GN=RPS28A PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 1.950e-11 Identity = 34/40 (85.00%), Postives = 37/40 (92.50%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +VMGRTGSRGQVTQVRVKF D +R+IMRNVKGPVREGDI Sbjct: 12 KVMGRTGSRGQVTQVRVKF-TDSDRYIMRNVKGPVREGDI 50
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS28_RAT (40S ribosomal protein S28 OS=Rattus norvegicus GN=Rps28 PE=1 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.676e-11 Identity = 29/40 (72.50%), Postives = 37/40 (92.50%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +V+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 16 KVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS28_PIG (40S ribosomal protein S28 OS=Sus scrofa GN=RPS28 PE=3 SV=2) HSP 1 Score: 65.4698 bits (158), Expect = 9.676e-11 Identity = 29/40 (72.50%), Postives = 37/40 (92.50%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +V+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 16 KVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS28_NEUCR (40S ribosomal protein S28 OS=Neurospora crassa GN=rps-28 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.676e-11 Identity = 31/39 (79.49%), Postives = 35/39 (89.74%), Query Frame = -2 Query: 250 VMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 366 V+GRTGSRG VTQVRV+F+DDQ R I+RNVKGPVRE DI Sbjct: 16 VLGRTGSRGGVTQVRVEFMDDQTRSIIRNVKGPVREDDI 54
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS28_MOUSE (40S ribosomal protein S28 OS=Mus musculus GN=Rps28 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.676e-11 Identity = 29/40 (72.50%), Postives = 37/40 (92.50%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +V+GRTGS+GQ TQVRV+F+DD +R I+RNVKGPVREGD+ Sbjct: 16 KVLGRTGSQGQCTQVRVEFMDDTSRSIIRNVKGPVREGDV 55
BLAST of CF834604 vs. ExPASy Swiss-Prot
Match: RS28_KLUMA (40S ribosomal protein S28 OS=Kluyveromyces marxianus GN=RPS28 PE=3 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 9.676e-11 Identity = 31/40 (77.50%), Postives = 36/40 (90.00%), Query Frame = -2 Query: 250 EVMGRTGSRGQVTQVRVKFLDDQNRFIMRNVKGPVREGDI 369 +V+GRTGSRG VTQVRV+FL+D R I+RNVKGPVREGDI Sbjct: 14 KVLGRTGSRGGVTQVRVEFLEDTTRTIVRNVKGPVREGDI 53 The following BLAST results are available for this feature:
BLAST of CF834604 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834604 ID=CF834604; Name=CF834604; organism=Citrus sinensis; type=EST; length=370bpback to top |