CF834634
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCA_ARATH (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Arabidopsis thaliana GN=RCA PE=1 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 8.535e-40 Identity = 74/104 (71.15%), Postives = 87/104 (83.65%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFYGKAAQQMNVPIPEGCTDPTAENFDPTARNDDGSCQY 314 IGK LVNS+E P FEQP MT +KL+EYGNM+V EQENV V +A+ YLS+AALG+ANADAI G FYGK AQQ+N+P+PEGCTDP AENFDPTAR+DDG+C Y Sbjct: 369 IGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENVKRVQLAETYLSQAALGDANADAIGRGTFYGKGAQQVNLPVPEGCTDPVAENFDPTARSDDGTCVY 472
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 158.303 bits (399), Expect = 1.610e-38 Identity = 70/106 (66.04%), Postives = 88/106 (83.02%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFYGKAAQQMNVPIPEGCTDPTAENFDPTARNDDGSCQYTL 320 +GK LVNSK+ P FEQP MT+ KL+EYGNM+VQEQENV V +AD+Y+S AALG+AN DAI G F+GKAAQQ+++P+ +GCTDP A+N+DPTAR+DDGSC Y L Sbjct: 367 VGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENVKRVQLADQYMSSAALGDANKDAIDRGTFFGKAAQQVSLPVAQGCTDPEAKNYDPTARSDDGSCTYNL 472
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 157.532 bits (397), Expect = 2.746e-38 Identity = 72/106 (67.92%), Postives = 93/106 (87.74%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFYGKAAQQM-NVPIPEGCTDPTAENFDPTARNDDGSCQYT 317 IGK LVNS+E P FEQP+MT++KL+EYG M+V+EQENV V +A++YLSEAALG+AN+DA+++G+FYG+ AQQ N+P+PEGCTDP A+NFDPTAR+DDGSC YT Sbjct: 360 IGKRLVNSREGPPEFEQPKMTIEKLMEYGYMLVKEQENVKRVQLAEQYLSEAALGDANSDAMKTGSFYGQGAQQAGNLPVPEGCTDPVAKNFDPTARSDDGSCLYT 465
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCA1_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Larrea tridentata GN=RCA1 PE=2 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 2.746e-38 Identity = 77/106 (72.64%), Postives = 90/106 (84.91%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFY-GKAAQQM-NVPIPEGCTDPTAENFDPTARNDDGSCQY 314 IGK LVNSKE P+FEQP+MT+DKLL YG M+VQEQENV V +ADKY+SEAALG+AN DAI+ G FY G+AAQQ+ NVP+PEGCTDP A N+DPTAR+DDGSC Y Sbjct: 369 IGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENVKRVQLADKYMSEAALGDANNDAIKRGTFYGGQAAQQVGNVPVPEGCTDPQATNYDPTARSDDGSCVY 474
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 2.324e-37 Identity = 69/105 (65.71%), Postives = 90/105 (85.71%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFYGKAAQQMNVPIPEGCTDPTAENFDPTARNDDGSCQYT 317 IGK LVNS++ TFEQP+MT++KLLEYG+M+VQEQ+NV V +AD Y+S+AALG+AN DA+++G+FYGK AQQ +P+PEGCTD A+N+DPTAR+DDGSC YT Sbjct: 359 IGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNVKRVQLADTYMSQAALGDANQDAMKTGSFYGKGAQQGTLPVPEGCTDQNAKNYDPTARSDDGSCLYT 463
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCA_MALDO (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Malus domestica GN=RCA PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 2.256e-24 Identity = 52/69 (75.36%), Postives = 61/69 (88.41%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFYG 209 IGK LVNSKE PTFEQP+MT++KLLEYGNM+VQEQENV V +ADKYLSEAALG+AN+DA+ +G FYG Sbjct: 369 IGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLSEAALGDANSDAMNTGTFYG 437
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCA2_LARTR (Ribulose bisphosphate carboxylase/oxygenase activase 2, chloroplastic OS=Larrea tridentata GN=RCA2 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 2.112e-22 Identity = 49/67 (73.13%), Postives = 58/67 (86.57%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNF 203 IGK LVNSKE PTFEQP+MT+DKLL+YGNM+V+EQENV V +ADKY+SEAALG+AN DAI+ G F Sbjct: 369 IGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENVKRVQLADKYMSEAALGDANQDAIKRGTF 435
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCA_PHAAU (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Phaseolus aureus GN=RCA PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 2.758e-22 Identity = 48/67 (71.64%), Postives = 59/67 (88.06%), Query Frame = 3 Query: 6 GKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFY 206 GK LVNSKE PTF+QP+M++DKLL+YGNM+VQEQENV V +ADKYL+EAALG AN DAI+SG+F+ Sbjct: 372 GKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENVKRVQLADKYLNEAALGNANEDAIKSGSFF 438
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 3.603e-22 Identity = 48/70 (68.57%), Postives = 61/70 (87.14%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFYGK 212 I K LVNS+E PTF+QP+MT++KL+EYG+M+VQEQENV V +ADKYLSEAALG+AN DA+++G FYGK Sbjct: 356 ISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENVKRVQLADKYLSEAALGQANDDAMKTGAFYGK 425
BLAST of CF834634 vs. ExPASy Swiss-Prot
Match: RCA1_TOBAC (Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 3.050e-21 Identity = 47/68 (69.12%), Postives = 58/68 (85.29%), Query Frame = 3 Query: 3 IGKSLVNSKEAAPTFEQPRMTMDKLLEYGNMIVQEQENVNTVHVADKYLSEAALGEANADAIQSGNFY 206 IG L+NS + PTFEQP+MT++KLLEYGNM+VQEQENV V +ADKYL EAALG+ANADAI +G+F+ Sbjct: 373 IGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENVKRVQLADKYLKEAALGDANADAINNGSFF 440 The following BLAST results are available for this feature:
BLAST of CF834634 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834634 ID=CF834634; Name=CF834634; organism=Citrus sinensis; type=EST; length=483bpback to top |