CF834635

Overview
NameCF834635
Unique NameCF834635
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length709
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3570 contig Csv1_Contig3570:3..710. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834635 vs. ExPASy Swiss-Prot
Match: KPRS3_SPIOL (Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea GN=PRS3 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.712e-75
Identity = 132/159 (83.02%), Postives = 148/159 (93.08%), Query Frame = -2
Query:  232 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFEQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 708
            IPLL  +LQQLPDSDNI+IAFPDDGAWKRFHKQLQHFPMIVC KVR+G+QRIVR+KEGDP GRH+VIVDDLVQSGGTLIECQKVLAAHGAAK+SAYVTHGIFPN SWERF+ DT G PE G+T+FWI+DSCP+TVK V ++PPFEV+SLAGSIA+ALQI
Sbjct:  248 IPLLKKKLQQLPDSDNITIAFPDDGAWKRFHKQLQHFPMIVCAKVREGDQRIVRLKEGDPTGRHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGIFPNKSWERFKPDTAGCPEEGMTHFWITDSCPLTVKMVKNRPPFEVISLAGSIAAALQI 406          
BLAST of CF834635 vs. ExPASy Swiss-Prot
Match: KPRS3_ARATH (Ribose-phosphate pyrophosphokinase 3 OS=Arabidopsis thaliana GN=PRS3 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 5.509e-74
Identity = 133/159 (83.65%), Postives = 146/159 (91.82%), Query Frame = -2
Query:  232 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFEQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 708
            IPLL +RLQ LPDSDNISIAFPDDGAWKRFHKQLQH+P IVCNKVR G++RIVRIKEGD  GRH+VIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFP +SW+RF+ DT G P  GL+YFWI+DSC +TVKEVM+KPPFEVLSLAGSIASALQ+
Sbjct:  253 IPLLKSRLQSLPDSDNISIAFPDDGAWKRFHKQLQHYPTIVCNKVRMGDKRIVRIKEGDAEGRHVVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPRSSWKRFKLDTKGDPAEGLSYFWITDSCGMTVKEVMNKPPFEVLSLAGSIASALQV 411          
BLAST of CF834635 vs. ExPASy Swiss-Prot
Match: KPRS3_ORYSJ (Ribose-phosphate pyrophosphokinase 3 OS=Oryza sativa subsp. japonica GN=Os01g0723600 PE=2 SV=1)

HSP 1 Score: 271.552 bits (693), Expect = 3.023e-72
Identity = 127/159 (79.87%), Postives = 143/159 (89.94%), Query Frame = -2
Query:  232 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFEQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 708
            IPLL +RLQ+LPDSDNI+IAFPDDGAWKRF+KQLQHFPM+VCNKVR+G QRIVRIKEGDPRGRH+VIVDDLVQSGGTLIECQKVLA HGAAK+SAYVTHGIFPN SWE+F+ D G  P  GL++FWI+DSCP+TV  V  + PFE+LSLAG IASALQI
Sbjct:  251 IPLLKSRLQELPDSDNITIAFPDDGAWKRFYKQLQHFPMVVCNKVREGEQRIVRIKEGDPRGRHVVIVDDLVQSGGTLIECQKVLAEHGAAKVSAYVTHGIFPNKSWEKFQPDNGEGPGHGLSHFWITDSCPLTVNAVKDRQPFEILSLAGPIASALQI 409          
BLAST of CF834635 vs. ExPASy Swiss-Prot
Match: KPRS4_ORYSJ (Ribose-phosphate pyrophosphokinase 4 OS=Oryza sativa subsp. japonica GN=Os02g0714600 PE=2 SV=1)

HSP 1 Score: 243.047 bits (619), Expect = 1.151e-63
Identity = 116/159 (72.96%), Postives = 132/159 (83.02%), Query Frame = -2
Query:  232 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFEQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 708
            IPLLL RL+QLPD+DNI+IAFPDDGAWKRFHK L +FPM+VC KVR+G++RIVRIKEG+P GRH+VIVDDLVQSGGTL ECQKVLAAHGAAK+SAYVTH +FP  S+ERF             YFWI+DSCP TVK +  +PPFEVLSLAGSIA ALQI
Sbjct:  167 IPLLLQRLRQLPDADNITIAFPDDGAWKRFHKLLLNFPMVVCAKVREGDKRIVRIKEGNPEGRHVVIVDDLVQSGGTLRECQKVLAAHGAAKVSAYVTHAVFPKQSYERFTHTNSAGSADKFAYFWITDSCPQTVKAINQQPPFEVLSLAGSIADALQI 325          
BLAST of CF834635 vs. ExPASy Swiss-Prot
Match: KPRS4_SPIOL (Ribose-phosphate pyrophosphokinase 4 OS=Spinacia oleracea GN=PRS4 PE=2 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 9.746e-63
Identity = 115/159 (72.33%), Postives = 131/159 (82.39%), Query Frame = -2
Query:  232 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFEQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 708
            IPLL  RL QLPD+D I +AFPDDGAWKRFHKQL HFPM+VC KVR+G++RIVR+KEG+P G H+VIVDDLVQSGGTLIECQKVLAAHGA K+SAYVTH +FP  S+ERF     G  +   TYFWI+DSCP TVK + +K PFEVLSLAGSIA ALQI
Sbjct:  161 IPLLKQRLDQLPDADKIVVAFPDDGAWKRFHKQLDHFPMVVCAKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGATKVSAYVTHAVFPKNSFERFTHKDDGS-DKAFTYFWITDSCPRTVKSIANKAPFEVLSLAGSIADALQI 318          
BLAST of CF834635 vs. ExPASy Swiss-Prot
Match: KPRS4_ARATH (Ribose-phosphate pyrophosphokinase 4 OS=Arabidopsis thaliana GN=PRS4 PE=2 SV=2)

HSP 1 Score: 238.81 bits (608), Expect = 2.171e-62
Identity = 112/159 (70.44%), Postives = 131/159 (82.39%), Query Frame = -2
Query:  232 IPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFEQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 708
            IPLL  RLQQLP+++ + +AFPDDGAWKRFHK L H+P +VC KVR+G++RIVR+KEG+P G H+VIVDDLVQSGGTLIECQKVLAAHGA K+SAYVTHG+FP +SWERF     G  E    YFWI+DSCP TVK + +K PFEVLSLAGSIA ALQI
Sbjct:  180 IPLLTKRLQQLPETEKVIVAFPDDGAWKRFHKLLDHYPTVVCTKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAVKVSAYVTHGVFPKSSWERFTHKKNGL-EEAFAYFWITDSCPQTVKAIGNKAPFEVLSLAGSIADALQI 337          
BLAST of CF834635 vs. ExPASy Swiss-Prot
Match: KPRS_MARMS (Ribose-phosphate pyrophosphokinase OS=Marinomonas sp. (strain MWYL1) GN=prs PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.023e-11
Identity = 52/161 (32.30%), Postives = 82/161 (50.93%), Query Frame = -2
Query:  235 PLLLNRLQQLPDSDNISIAFPDDGAWKR---FHKQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFEQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 705
            PLLL+ LQ+    +NI++  PD G   R   F K L    + + +K R   N+  +    GD  G+  V+VDD+  +GGTL    K L  HGAAK+ AY TH +    + E  +        S L    ++D+ P+T +E ++ P    LS++  +A A++
Sbjct:  150 PLLLDDLQR-QGHENITVVSPDVGGVVRARAFAKLLDDADLAIIDKRRPRANEAQIMHLIGDVEGKTCVLVDDMCDTGGTLCAAAKALKEHGAAKVLAYCTHPVLSGKAIENIK-------NSVLDELVVTDTIPLT-QEALNCPQIRQLSMSDIMAEAVR 301          
The following BLAST results are available for this feature:
BLAST of CF834635 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
KPRS3_SPIOL1.712e-7583.02Ribose-phosphate pyrophosphokinase 3, mitochondria... [more]
KPRS3_ARATH5.509e-7483.65Ribose-phosphate pyrophosphokinase 3 OS=Arabidopsi... [more]
KPRS3_ORYSJ3.023e-7279.87Ribose-phosphate pyrophosphokinase 3 OS=Oryza sati... [more]
KPRS4_ORYSJ1.151e-6372.96Ribose-phosphate pyrophosphokinase 4 OS=Oryza sati... [more]
KPRS4_SPIOL9.746e-6372.33Ribose-phosphate pyrophosphokinase 4 OS=Spinacia o... [more]
KPRS4_ARATH2.171e-6270.44Ribose-phosphate pyrophosphokinase 4 OS=Arabidopsi... [more]
KPRS_MARMS1.023e-1132.30Ribose-phosphate pyrophosphokinase OS=Marinomonas ... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05N20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834635 ID=CF834635; Name=CF834635; organism=Citrus sinensis; type=EST; length=709bp
TTTTTTTTTTTTTTTTTAAAAAAACACATATATAGTTTGATTCTATTCAA
TCAGATTCAGATCAAAACACCGGGTAAATGTTTGCATAAACAAAGGCAAA
CGAGTATCCAAAAATAATATATCTCTGCCGCTTTCTTTTGTTTTTCTTTA
TTCATTGGTGAGATTGCTCCTTCAAAATCAGCTTGGAACTTCTCTATATA
TGATATGACTAGATATTTCAAAACAAATTTATATCTGTAGAGCAGATGCA
ATGGAACCCGCAAGACTGAGAACTTCAAATGGTGGTTTGCTCATAACCTC
TTTTACAGTCACTGGGCAGGAGTCACTAATCCAGAAGTAGGTCAAGCCAG
ACTCAGGTTTTCCTCCAGTATCTTGTTCAAATCGTTCCCACGACGCGTTA
GGAAAAATCCCATGCGTCACATAAGCGCTTATTTTTGCTGCTCCATGGGC
TGCTAGCACTTTCTGACATTCAATTAGAGTGCCACCTGATTGAACCAGAT
CATCAACAATCACAATGTGGCGTCCTCGAGGGTCTCCCTCCTTAATGCGT
ACAATCCTTTGGTTACCATCCCGAACTTTATTACAAACAATCATTGGAAA
GTGCTGCAGCTGCTTATGAAATCGTTTCCATGCACCATCATCAGGAAAAG
CAATGGAAATATTGTCAGAATCAGGGAGCTGTTGGAGCCTATTTAACAGC
AAAGGTATT
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