CF834637

Overview
NameCF834637
Unique NameCF834637
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834637 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.534e-38
Identity = 69/86 (80.23%), Postives = 74/86 (86.05%), Query Frame = -2
Query:  263 TCPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFLEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCH 520
            +CP  LQ RS  GHGPVV CKS CEAF +DE CCRNHYNSPQTC+ SS+ +FFKHACPAT TYAHDSPSLMHECSSPRELKVIFCH
Sbjct:  167 SCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFCH 252          
BLAST of CF834637 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 1.001e-13
Identity = 36/84 (42.86%), Postives = 51/84 (60.71%), Query Frame = -2
Query:  266 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFLEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 517
            CP  LQVRS  G   VVACKS C AF + + CC   + +PQ+C+ +++ + FK ACP   +YA+D P+ +  CS    + V FC
Sbjct:  157 CPVGLQVRSRNGKR-VVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYI-VTFC 238          
BLAST of CF834637 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 31/84 (36.90%), Postives = 46/84 (54.76%), Query Frame = -2
Query:  266 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFLEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 517
            CP  LQV++    G V++CKS C AFG  + CC    N+P+TC  + + E F+  CP   +YA+D  +    CS   +  + FC
Sbjct:  164 CPAPLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 245          
BLAST of CF834637 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 33/84 (39.29%), Postives = 43/84 (51.19%), Query Frame = -2
Query:  266 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFLEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 517
            CP  L+VR   G   V  C+S C A G D  CC   Y SP  CR + F   FK  CP   +YA+D  + ++ C + R L + FC
Sbjct:  168 CPSALEVRDREGR--VAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYL-ITFC 248          
BLAST of CF834637 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 5.495e-12
Identity = 33/86 (38.37%), Postives = 46/86 (53.49%), Query Frame = -2
Query:  266 ATCPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFLEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 523
            A CP  L+V        VVACKS CE F TD+ CCR   + P+TC  + +   FK+ACP   +YA+D  +    C+     ++ FC
Sbjct:  157 AACPDMLKVMD---QNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTG-ANYEITFC 238          
BLAST of CF834637 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.224e-11
Identity = 30/84 (35.71%), Postives = 46/84 (54.76%), Query Frame = -2
Query:  266 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFLEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 517
            CP  LQV++    G V++CKS C AFG  + CC    ++P+TC  + + E F+  CP   +YA+D  +    CS   +  + FC
Sbjct:  130 CPAQLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 211          
BLAST of CF834637 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.224e-11
Identity = 32/86 (37.21%), Postives = 44/86 (51.16%), Query Frame = -2
Query:  266 ATCPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFLEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 523
            A CP  LQ +     G VVAC S C  FGT + CC    N+P+TC  +++ E F +ACP   +YA+D       C+      + FC
Sbjct:  161 AVCPSELQKKG--SDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC 244          
BLAST of CF834637 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 2.088e-11
Identity = 30/86 (34.88%), Postives = 44/86 (51.16%), Query Frame = -2
Query:  266 ATCPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFLEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 523
            A CP  LQV+       V+ACKS C AF   + CC   +++ +TC A+ +   FK  CP   +YA+D  +    CS   +  + FC
Sbjct:  159 AVCPAELQVKG--SDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFC 242          
The following BLAST results are available for this feature:
BLAST of CF834637 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
OLP1_SOLLC1.534e-3880.23Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ARATH1.001e-1342.86Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TP1A_MALDO5.495e-1236.90Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLPH_ORYSJ5.495e-1239.29Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PR5_ARATH5.495e-1238.37Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TP1B_MALDO1.224e-1135.71Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP_PRUAV1.224e-1137.21Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP1_CASSA2.088e-1134.88Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05N21_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834637 ID=CF834637; Name=CF834637; organism=Citrus sinensis; type=EST; length=524bp
TTTTTTTTTTTTTTTTTAAACCACACATCAACCCTTTTACATTCCCATTC
CAAATTGAATTGGAACTTACAAACCTCACCACAACTTACAGACTGATGAC
ACCCAACATGACACAAGCTCACATTGATCATTTTTAATTTCTCCTTTTAG
TTACGAGATTAATTAAAAAGCAAGATACTGCTAATTGACGAAAACAAACA
CAACAATCCTAAGCACTGTGAAGCTTGATGGTCCAGCTTATTATTATTCT
CATGCTTCTCTAGTGACAGAAAATAACTTTGAGCTCACGTGGCGAGGAGC
ACTCATGCATCAGCGAAGGGCTATCATGGGCATAAGTCATCGTGGCTGGA
CAAGCGTGCTTGAAAAACTCCAAAAAGCTCGAAGCCCGACATGTCTGCGG
ACTGTTGTAATGGTTCCTACAACACAGCTCGTCCGTACCAAACGCCTCAC
ACCCACTCTTACATGCCACCACGGGGCCGTGACCCGGCGGTGACCTCACC
TGCAGGTTCTGAGGACACGTGGCT
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