CF834638

Overview
NameCF834638
Unique NameCF834638
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length507
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1841 contig Csv1_Contig1841:531..1037. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.865e-39
Identity = 70/86 (81.40%), Postives = 75/86 (87.21%), Query Frame = 3
Query:    6 TCPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCH 263
            +CP  LQ RS  GHGPVV CKS CEAF +DE CCRNHYNSPQTC+ SS+S+FFKHACPAT TYAHDSPSLMHECSSPRELKVIFCH
Sbjct:  167 SCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFCH 252          
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 8.395e-15
Identity = 37/84 (44.05%), Postives = 53/84 (63.10%), Query Frame = 3
Query:    9 CPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 260
            CP+ LQVRS  G   VVACKS C AF + + CC   + +PQ+C+ +++S+ FK ACP   +YA+D P+ +  CS    + V FC
Sbjct:  157 CPVGLQVRSRNGKR-VVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYI-VTFC 238          
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 1.026e-12
Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 3
Query:    9 CPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 260
            CP  LQV++    G V++CKS C AFG  + CC    N+P+TC  + +SE F+  CP   +YA+D  +    CS   +  + FC
Sbjct:  164 CPAPLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 245          
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.750e-12
Identity = 34/84 (40.48%), Postives = 44/84 (52.38%), Query Frame = 3
Query:    9 CPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 260
            CP  L+VR   G   V  C+S C A G D  CC   Y SP  CR + FS  FK  CP   +YA+D  + ++ C + R L + FC
Sbjct:  168 CPSALEVRDREGR--VAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYL-ITFC 248          
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.286e-12
Identity = 31/84 (36.90%), Postives = 47/84 (55.95%), Query Frame = 3
Query:    9 CPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 260
            CP  LQV++    G V++CKS C AFG  + CC    ++P+TC  + +SE F+  CP   +YA+D  +    CS   +  + FC
Sbjct:  130 CPAQLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFC 211          
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 2.986e-12
Identity = 34/86 (39.53%), Postives = 47/86 (54.65%), Query Frame = 3
Query:    3 ATCPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 260
            A CP  L+V        VVACKS CE F TD+ CCR   + P+TC  + +S  FK+ACP   +YA+D  +    C+     ++ FC
Sbjct:  157 AACPDMLKVMD---QNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTG-ANYEITFC 238          
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.900e-12
Identity = 33/86 (38.37%), Postives = 45/86 (52.33%), Query Frame = 3
Query:    3 ATCPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 260
            A CP  LQ +     G VVAC S C  FGT + CC    N+P+TC  +++SE F +ACP   +YA+D       C+      + FC
Sbjct:  161 AVCPSELQKKG--SDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFC 244          
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 3.900e-12
Identity = 31/86 (36.05%), Postives = 45/86 (52.33%), Query Frame = 3
Query:    3 ATCPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 260
            A CP  LQV+       V+ACKS C AF   + CC   +++ +TC A+ +S  FK  CP   +YA+D  +    CS   +  + FC
Sbjct:  159 AVCPAELQVKG--SDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFC 242          
BLAST of CF834638 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 4.312e-11
Identity = 32/84 (38.10%), Postives = 42/84 (50.00%), Query Frame = 3
Query:    9 CPLNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 260
            CP  LQV+     G V+ACKS C AF   + CC    + P+TC    +S+ FK  CP   +YA+D  S    CS      + FC
Sbjct:  164 CPAPLQVKG--SDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFC 245          
The following BLAST results are available for this feature:
BLAST of CF834638 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
OLP1_SOLLC2.865e-3981.40Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ARATH8.395e-1544.05Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TP1A_MALDO1.026e-1238.10Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLPH_ORYSJ1.750e-1240.48Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
TP1B_MALDO2.286e-1236.90Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
PR5_ARATH2.986e-1239.53Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TLP_PRUAV3.900e-1238.37Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP1_CASSA3.900e-1236.05Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP1_PRUPE4.312e-1138.10Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05N21_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834638 ID=CF834638; Name=CF834638; organism=Citrus sinensis; type=EST; length=507bp
TAGCCACGTGCCCTCTTAACCTGCAGGTGAGGTCACCGCCGGGTCACGGC
CCCGTGGTGGCATGTAAGAGTGGGTGTGAGGCGTTTGGTACGGACGAGCT
GTGTTGTAGGAACCATTACAACAGTCCGCAGACATGTCGGGCTTCGAGCT
TTTCGGAGTTCTTCAAGCACGCTTGTCCAGCCACGATGACTTATGCCCAT
GATAGCCCTTCGCTGATGCATGAGTGCTCCTCGCCACGTGAGCTCAAAGT
TATTTTCTGTCACTAGAGAAGCATGAGAATAATAATAAGCTGGACCATCA
AGCTTCACAGTGCTTAGGATTGTTGTGTTTGTTTTCGTCAATTAGCAGTA
TCTTGCTTTTTAATTAATCTCGTAACTAAAAGGAGAAATTAAAAATGATC
AATGTGAGCTTGTGTCATGTTGGGTGTCATCAGTCTGTAAGTTGTGGTGT
GTTTTGTAAGTTCCAATTCAATTTGGAATGGGAATGTAATGAGTTTGATG
TGTGGTA
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