CF834639

Overview
NameCF834639
Unique NameCF834639
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length524
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: OLP1_SOLLC (Osmotin-like protein OS=Solanum lycopersicum PE=1 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 2.617e-38
Identity = 69/85 (81.18%), Postives = 74/85 (87.06%), Query Frame = -2
Query:  266 TCPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFC 520
            +CP  LQ RS  GHGPVV CKS CEAF +DE CCRNHYNSPQTC+ SS+S+FFKHACPAT TYAHDSPSLMHECSSPRELKVIFC
Sbjct:  167 SCPAVLQFRSHGGHGPVVGCKSACEAFKSDEFCCRNHYNSPQTCKPSSYSQFFKHACPATFTYAHDSPSLMHECSSPRELKVIFC 251          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: TLPH_ARATH (Thaumatin-like protein OS=Arabidopsis thaliana GN=At1g18250 PE=2 SV=2)

HSP 1 Score: 81.2629 bits (199), Expect = 3.113e-15
Identity = 38/85 (44.71%), Postives = 53/85 (62.35%), Query Frame = -2
Query:  263 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 517
            CP  LQVRS  G   VVACKS C AF + + CC   + +PQ+C+ +++S+ FK ACP   +YA+D P+ +  CS    + V FCP
Sbjct:  157 CPVGLQVRSRNGKR-VVACKSACSAFNSPQYCCTGLFGNPQSCKPTAYSKIFKVACPKAYSYAYDDPTSIATCSKANYI-VTFCP 239          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: TP1A_MALDO (Thaumatin-like protein 1a OS=Malus domestica GN=TL1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.708e-13
Identity = 33/85 (38.82%), Postives = 48/85 (56.47%), Query Frame = -2
Query:  263 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 517
            CP  LQV++    G V++CKS C AFG  + CC    N+P+TC  + +SE F+  CP   +YA+D  +    CS   +  + FCP
Sbjct:  164 CPAPLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNNTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 246          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: TLPH_ORYSJ (Thaumatin-like protein OS=Oryza sativa subsp. japonica GN=Os11g0706600 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.708e-13
Identity = 35/85 (41.18%), Postives = 45/85 (52.94%), Query Frame = -2
Query:  263 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 517
            CP  L+VR   G   V  C+S C A G D  CC   Y SP  CR + FS  FK  CP   +YA+D  + ++ C + R L + FCP
Sbjct:  168 CPSALEVRDREGR--VAGCRSACRAMGGDRYCCTGDYASPSACRPTIFSHLFKAICPRAYSYAYDDATSLNRCHAKRYL-ITFCP 249          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: PR5_ARATH (Pathogenesis-related protein 5 OS=Arabidopsis thaliana GN=At1g75040 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 1.708e-13
Identity = 35/87 (40.23%), Postives = 48/87 (55.17%), Query Frame = -2
Query:  263 ATCPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 523
            A CP  L+V        VVACKS CE F TD+ CCR   + P+TC  + +S  FK+ACP   +YA+D  +    C+     ++ FCP
Sbjct:  157 AACPDMLKVMD---QNNVVACKSACERFNTDQYCCRGANDKPETCPPTDYSRIFKNACPDAYSYAYDDETSTFTCTG-ANYEITFCP 239          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: TP1B_MALDO (Thaumatin-like protein 1b (Fragment) OS=Malus domestica PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.805e-13
Identity = 32/85 (37.65%), Postives = 48/85 (56.47%), Query Frame = -2
Query:  263 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 517
            CP  LQV++    G V++CKS C AFG  + CC    ++P+TC  + +SE F+  CP   +YA+D  +    CS   +  + FCP
Sbjct:  130 CPAQLQVKA--ADGSVISCKSACLAFGDSKYCCTPPNDTPETCPPTEYSEIFEKQCPQAYSYAYDDKNSTFTCSGGPDYVITFCP 212          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: TLP_PRUAV (Glucan endo-1,3-beta-glucosidase OS=Prunus avium PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 3.805e-13
Identity = 34/87 (39.08%), Postives = 46/87 (52.87%), Query Frame = -2
Query:  263 ATCPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 523
            A CP  LQ +     G VVAC S C  FGT + CC    N+P+TC  +++SE F +ACP   +YA+D       C+      + FCP
Sbjct:  161 AVCPSELQKKG--SDGSVVACLSACVKFGTPQYCCTPPQNTPETCPPTNYSEIFHNACPDAYSYAYDDKRGTFTCNGGPNYAITFCP 245          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: TLP1_CASSA (Thaumatin-like protein 1 OS=Castanea sativa GN=TL1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 6.491e-13
Identity = 32/87 (36.78%), Postives = 46/87 (52.87%), Query Frame = -2
Query:  263 ATCPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 523
            A CP  LQV+       V+ACKS C AF   + CC   +++ +TC A+ +S  FK  CP   +YA+D  +    CS   +  + FCP
Sbjct:  159 AVCPAELQVKG--SDASVLACKSACTAFNQPQYCCTGAFDTARTCPATKYSRIFKQQCPQAYSYAYDDSTSTFTCSGAPDYVITFCP 243          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: TLP1_PRUPE (Thaumatin-like protein 1 OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 7.177e-12
Identity = 33/85 (38.82%), Postives = 43/85 (50.59%), Query Frame = -2
Query:  263 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 517
            CP  LQV+     G V+ACKS C AF   + CC    + P+TC    +S+ FK  CP   +YA+D  S    CS      + FCP
Sbjct:  164 CPAPLQVKG--SDGSVIACKSACLAFNQPKYCCTPPNDKPETCPPPDYSKLFKTQCPQAYSYAYDDKSSTFTCSGRPAYLITFCP 246          
BLAST of CF834639 vs. ExPASy Swiss-Prot
Match: TLP1_PYRPY (Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 2.727e-11
Identity = 30/85 (35.29%), Postives = 41/85 (48.24%), Query Frame = -2
Query:  263 CPQNLQVRSPPGHGPVVACKSGCEAFGTDELCCRNHYNSPQTCRASSFSEFFKHACPATMTYAHDSPSLMHECSSPRELKVIFCP 517
            CP  L  +     G V+ CKS C A    + CC   Y +P TC  + FS+ FK+ CP   +YA+D  S    C      ++ FCP
Sbjct:  162 CPAELSDKG--SDGSVIGCKSACLALNQPQYCCTGAYGTPDTCPPTDFSKVFKNQCPQAYSYAYDDKSSTFTCFGGPNYEITFCP 244          
The following BLAST results are available for this feature:
BLAST of CF834639 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
OLP1_SOLLC2.617e-3881.18Osmotin-like protein OS=Solanum lycopersicum PE=1 ... [more]
TLPH_ARATH3.113e-1544.71Thaumatin-like protein OS=Arabidopsis thaliana GN=... [more]
TP1A_MALDO1.708e-1338.82Thaumatin-like protein 1a OS=Malus domestica GN=TL... [more]
TLPH_ORYSJ1.708e-1341.18Thaumatin-like protein OS=Oryza sativa subsp. japo... [more]
PR5_ARATH1.708e-1340.23Pathogenesis-related protein 5 OS=Arabidopsis thal... [more]
TP1B_MALDO3.805e-1337.65Thaumatin-like protein 1b (Fragment) OS=Malus dome... [more]
TLP_PRUAV3.805e-1339.08Glucan endo-1,3-beta-glucosidase OS=Prunus avium P... [more]
TLP1_CASSA6.491e-1336.78Thaumatin-like protein 1 OS=Castanea sativa GN=TL1... [more]
TLP1_PRUPE7.177e-1238.82Thaumatin-like protein 1 OS=Prunus persica PE=2 SV... [more]
TLP1_PYRPY2.727e-1135.29Thaumatin-like protein 1 OS=Pyrus pyrifolia GN=TL1... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05N22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05N22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834639 ID=CF834639; Name=CF834639; organism=Citrus sinensis; type=EST; length=524bp
TTTTTTTTTTTTTTTTTATACCACACATCAACCTTTTAACATTCCCATTC
CAAATTGAATTGGAACTTACAAACCTCACCACAACTTACAGACTGATGAC
ACCCAACATGACACAAGCTCACATTGATCATTTTTAATTTCTCCTTTTAG
TTACGAGATTAATTAAAAAGCAAGATACTGCTAATTGACGAAAACAAACA
CAACAATCCTAAGCACTGTGAAGCTTGATGGTCCAGCTTATTATTATTCT
CATGCTTCTCTAGGGACAGAAAATAACTTTGAGCTCACGTGGCGAGGAGC
ACTCATGCATCAGCGAAGGGCTATCATGGGCATAAGTCATCGTGGCTGGA
CAAGCGTGCTTGAAAAACTCCGAAAAGCTCGAAGCCCGACATGTCTGCGG
ACTGTTGTAATGGTTCCTACAACACAGCTCGTCCGTACCAAACGCCTCAC
ACCCACTCTTACATGCCACCACGGGGCCGTGACCCGGCGGTGACCTCACC
TGCAGGTTCTGAGGACACGTGGCT
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