CF834649

Overview
NameCF834649
Unique NameCF834649
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length727
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9802 contig Csv1_Contig9802:328..1054. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2)

HSP 1 Score: 270.396 bits (690), Expect = 6.978e-72
Identity = 123/209 (58.85%), Postives = 150/209 (71.77%), Query Frame = -1
Query:  104 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 727
            GFG SG+ T RKREIAAFFAQT HET GGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPD++A DPV+SFKSA+WFWMT Q PKPSCH+VII  W+PSA D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  +M
Sbjct:  121 GFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 268.47 bits (685), Expect = 2.652e-71
Identity = 122/209 (58.37%), Postives = 150/209 (71.77%), Query Frame = -1
Query:  104 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 727
            GFG SG+ T RKREIAAFFAQT HET GGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPD++A DPV+SFKSA+WFWMT Q PKPSCH+VII  W+PS+ D  A RLPG+G+ TNIINGG+ECG   +  V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  +M
Sbjct:  116 GFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMTPQSPKPSCHDVIIGRWQPSSADRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 324          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.245e-70
Identity = 120/209 (57.42%), Postives = 150/209 (71.77%), Query Frame = -1
Query:  104 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 727
            GFG +G+ T RKRE+AAFFAQT HET GGW  AP G YAWGYCY+R+     S           PGQ YYGRGPIQ+++N NY  CG A+G +LLNNPD++A + V+SFKSAIWFWMTAQ PKPSCH+VI   W PSA D  A RLPGYG+ TNIINGG+ECG+  +  V++RIGF+  +C   G+ PGDN+DC NQ+ +   L+ ++M
Sbjct:  126 GFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHGSDARVQDRIGFYRRYCSILGVSPGDNIDCGNQKSFNSGLLLETM 334          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.245e-70
Identity = 118/209 (56.46%), Postives = 149/209 (71.29%), Query Frame = -1
Query:  104 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 727
            GFG +G+ T RKREIAAFFAQT HET GGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPD++A D ++SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  ++
Sbjct:  108 GFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.245e-70
Identity = 120/209 (57.42%), Postives = 149/209 (71.29%), Query Frame = -1
Query:  104 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 727
            GFG +G+ T RKREIAAFFAQT HET GGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPD++A D V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  +M
Sbjct:  110 GFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1)

HSP 1 Score: 263.848 bits (673), Expect = 6.531e-70
Identity = 119/209 (56.94%), Postives = 148/209 (70.81%), Query Frame = -1
Query:  104 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 727
            GFG +G+ T RKREIAAF AQT HET GGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPD++A DPV+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PG+NLDC NQR +G  L+   M
Sbjct:  114 GFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2)

HSP 1 Score: 263.848 bits (673), Expect = 6.531e-70
Identity = 119/207 (57.49%), Postives = 148/207 (71.50%), Query Frame = -1
Query:  104 FGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 724
            F N G+   +KREIAAF  QT HET GGW  AP G YAWGYC++R+ +P++              QYYGRGPIQ++WN NY +CG A+GVDLLNNPD++A DPV+SFK+A+WFWMT Q PKPSCH+VI   W PS+ D  AGRLPGYG  TNIINGG+ECG   +  V++RIGF+  +C  FGI  GDNLDC +QRP+G +L   S+
Sbjct:  110 FANKGDTATKKREIAAFLGQTSHETTGGWPTAPDGPYAWGYCFLREQNPSTYCQASSEFPCASGKQYYGRGPIQISWNYNYGQCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVITGGWTPSSADRAAGRLPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.900e-69
Identity = 118/209 (56.46%), Postives = 148/209 (70.81%), Query Frame = -1
Query:  104 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 727
            GFG +G+ T RKREIAAF AQT HET GGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPD++A D V+SFKSAIWFWMT Q PKPSCH+VI   W+PS  D  A R+PG+G+ TNIINGG+ECG+  +  V++RIGF+  +CG  G+ PGDNLDC NQR +G  L+  ++
Sbjct:  110 GFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 5.529e-69
Identity = 115/200 (57.50%), Postives = 147/200 (73.50%), Query Frame = -1
Query:  128 FGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 724
            FG +G+  +RKRE+AAF  QT HET GGW  AP G YAWGYC++++ +P+S+           PG+ YYGRGP+QL+WN NY  CGEAL V+LL NPD++A D VLSFK+A+WFWMT Q PKPSCH+V+   W+PSA D  AGRLPGYG+ TN++NGG+ECG   N  V +R+GFF  +CG  G+  G+NLDC NQRP+G
Sbjct:   44 FGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243          
BLAST of CF834649 vs. ExPASy Swiss-Prot
Match: CHIT_SOLTU (Endochitinase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 260.381 bits (664), Expect = 7.221e-69
Identity = 119/209 (56.94%), Postives = 149/209 (71.29%), Query Frame = -1
Query:  104 GFGNSGNETMRKREIAAFFAQTGHETIGGWTDAPGGEYAWGYCYIRQVSPASSDXXXXXXXXPLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDVLAIDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNAGRLPGYGLTTNIINGGIECGYVGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 727
            GFG SG+   RKREIAAFFAQT HET GGW  AP G YAWGYC++R+                 PG+ Y+GRGPIQ++ N NY  CG A+GVDLLNNPD++A DPV+SFK+A+WFWMT Q PKPSCH+VII  W PS+ D  A RLPG+G+ TNIINGG+ECG   ++ V++RIGF+  +C   G+ PGDNLDC NQR +G  L+  ++
Sbjct:  120 GFGTSGDINARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLRERGNPGDYCPPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKTALWFWMTPQSPKPSCHDVIIGRWNPSSADRAANRLPGFGVITNIINGGLECGRGTDNRVQDRIGFYRRYCSILGVTPGDNLDCVNQRWFGNALLVDTL 328          
The following BLAST results are available for this feature:
BLAST of CF834649 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
CHI1_TOBAC6.978e-7258.85Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1... [more]
CHI2_TOBAC2.652e-7158.37Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]
CHI3_TOBAC2.245e-7057.42Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3... [more]
CHI2_SOLTU2.245e-7056.46Endochitinase 2 (Fragment) OS=Solanum tuberosum GN... [more]
CHI1_SOLTU2.245e-7057.42Endochitinase 1 (Fragment) OS=Solanum tuberosum GN... [more]
CHIC_SOLLC6.531e-7056.94Basic 30 kDa endochitinase OS=Solanum lycopersicum... [more]
CHI2_PEA6.531e-7057.49Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=... [more]
CHI3_SOLTU1.900e-6956.46Endochitinase 3 (Fragment) OS=Solanum tuberosum GN... [more]
CHIT_CARPA5.529e-6957.50Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHIT_SOLTU7.221e-6956.94Endochitinase OS=Solanum tuberosum PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O05_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834649 ID=CF834649; Name=CF834649; organism=Citrus sinensis; type=EST; length=727bp
TTTTTTTTTTTTTTTAGTTGTCCCCTACAAGTGTGACATCTACCGCCTTT
ATTAAGTAGCTTTTATTAAGCTTATTTTACTAAAACCCTGATCATGATGA
TCACATAGATTGTGCCATCAGATTAAGGCCATAAGGCCGTTGGTTGGAGC
AATCAAGATTGTCACCAGGCTGAATCCCAAACTTGCCACAGAAAGTGGTA
AAGAACCCAATACGGTTACGTACAGCGTCATTCCCAACGTAGCCACATTC
AATTCCACCGTTGATTATATTTGTGGTTAGACCGTATCCCGGAAGCCGGC
CGGCGTTTACGTCATTTGCTGATGGTTTCCATTCGTCGATAATGACTTCG
TGGCACGATGGCTTTGGTGGCTGTGCAGTCATCCAGAACCAGATTGCTGA
CTTGAATGATAGTACTGGATCAATGGCAAGTACGTCTGGATTGTTCAACA
AGTCCACCCCCAAGGCTTCTCCGCACCTTAAGTAATTGCAATTCCAAGTG
AGTTGAATTGGACCTCGGCCATAGTATTGCCCTGGCAAGGGACATGGACA
GTAAGGATAACAGTAGTCGGACGACGCAGGGCTAACTTGCCTAATATAGC
AATATCCCCAAGCATATTCTCCACCAGGTGCATCGGTCCATCCCCCAATA
GTTTCATGGCCAGTTTGGGCAAAAAAGGCAGCAATTTCTCTTTTACGCAT
GGTTTCATTTCCAGAGTTACCAAAGCC
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