CF834650

Overview
NameCF834650
Unique NameCF834650
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length589
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9802 contig Csv1_Contig9802:91..679. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 4.878e-53
Identity = 97/184 (52.72%), Postives = 119/184 (64.67%), Query Frame = 1
Query:   37 GGSAQNCGTGVVCXXXXXXXXXXXXXXXKIISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            G +   CG G  C                +ISR  F+ +L + ND  CPA+GFYTYDAFI AA+A+P FGN+G+   RKR IAAF  QT HETTGGW  AP G YAWGYC++R+  P++              QYYGRGPIQ++WN NY +CG  +GVDLLN PDL+ATD V+SFKSA+WFWMT
Sbjct:   52 GSTTDYCGPG--CQSQCGGPSPAPTDLSALISRSTFDQMLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSTYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT 233          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI5_PHAVU (Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 204.912 bits (520), Expect = 2.421e-52
Identity = 92/155 (59.35%), Postives = 113/155 (72.90%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            +ISR  F+ +L + ND  CPA+GFYTYDAFI AA+A+P FGN+G+   RKR IAAF  QT HETTGGW  AP G YAWGYC++R+  P++              QYYGRGPIQ++WN NY +CG  +GVDLLN PDL+ATD V+SFKSA+WFWMT
Sbjct:   78 LISRSTFDQVLKHRNDGACPAKGFYTYDAFIAAAKAYPSFGNTGDTATRKREIAAFLGQTSHETTGGWATAPDGPYAWGYCFVRERNPSAYCSATPQFPCAPGQQYYGRGPIQISWNYNYGQCGRAIGVDLLNKPDLVATDSVISFKSALWFWMT 232          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2)

HSP 1 Score: 204.527 bits (519), Expect = 3.162e-52
Identity = 98/158 (62.03%), Postives = 116/158 (73.42%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTG--GWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            +ISRE F  +LL+ ND  CPARGFYTYDAFI AA++FP F  +G++  RKR IAAF AQT HETTG  GW  AP G YAWGYCY R++ P SS           PG QY+GRGP+QL+WN NY +CG  +GVDLLNNPDLL++DP +SFKSA WFWMT
Sbjct:   55 LISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMT 211          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.162e-52
Identity = 92/156 (58.97%), Postives = 116/156 (74.36%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            IISR  F+D+L + ND  CPARGFYTYDAFI AA++FPGFG +G+   RK+ IAAFF QT HETTGGW  AP G Y+WGYC+ ++  P+S+            G+ YYGRGP+QL+WN NY +CG  +G DLLNNPDL++ DPV++FK+AIWFWMT
Sbjct:   74 IISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMT 229          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.162e-52
Identity = 109/226 (48.23%), Postives = 133/226 (58.85%), Query Frame = 1
Query:    1 LLIFSLPLSFVLGGSAQNCGT--------GVVCXXXXXXXXXXXXXXXK--------------------IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGG--WTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            L +FSL LS+++ GSA+ CG         G +C               K                    +I+RE F+ +LL+ ND  CPARGFYTYDAFI AA++FP F  +G++  RKR +AAF AQT HETTGG  W  AP G Y WGYCY R++ PA               QY+GRGP+QLTWN NY +CG  +GVDLLNNPDLLATDP +SFKSA WFWMT
Sbjct:    6 LSVFSLFLSYLILGSAEQCGRQAGGALCPGGLCCSQFGWCGNTDDYCKKENGCQSQCSGSGGDTGGLDSLITRERFDQMLLHRNDGGCPARGFYTYDAFIAAAKSFPAFATTGDDATRKREVAAFLAQTSHETTGGAGWA-APDGPYTWGYCYNRELNPADYCQWDPNYPCAPGKQYFGRGPMQLTWNYNYGQCGRAIGVDLLNNPDLLATDPTISFKSAFWFWMT 230          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 3.162e-52
Identity = 98/158 (62.03%), Postives = 116/158 (73.42%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTG--GWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            +ISRE F  +LL+ ND  CPARGFYTYDAFI AA++FP F  +G++  RKR IAAF AQT HETTG  GW  AP G YAWGYCY R++ P SS           PG QY+GRGP+QL+WN NY +CG  +GVDLLNNPDLL++DP +SFKSA WFWMT
Sbjct:   77 LISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMT 233          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.569e-51
Identity = 92/157 (58.60%), Postives = 117/157 (74.52%), Query Frame = 1
Query:  121 KIISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            KIISR MF+ +L + N+  CPA+GFYTYDAF+ AA++FP FG +G+  +RKR +AAF  QT HETTGGW  AP G YAWGYC++++  P+S+           PG+ YYGRGP+QL+WN NY  CGE L V+LL NPDL+ATD VLSFK+A+WFWMT
Sbjct:    4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMT 160          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIB_VITVI (Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 1.569e-51
Identity = 105/219 (47.95%), Postives = 131/219 (59.82%), Query Frame = 1
Query:    1 LLIFSLPLSFVLGGSAQNCG----------------------TGVVCXXXXXXXXXXXXXXXKIISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIR-QVIPASSDXXXXXXXXXLPGQYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            L+ F L LS +L GSA+ CG                      T   C               ++I+R MF D+L + N+  CP +GFYTYDAFI AA+AFPGFG +G+ T RKR IAAF AQT HETTGGW  AP G YAWGYCY+R Q  P +              +YYGRGPIQ+++N NY + G+ +GVDL+NNPDL+ATD V+SFK+A WFWMT
Sbjct:    6 LVAFCL-LSLILVGSAEQCGGQAGGRVCPGGACCSKFGWCGNTADYCGSGCQSQCSSTGDIGQLITRSMFNDMLKHRNEGSCPGKGFYTYDAFIAAAKAFPGFGTTGDTTTRKREIAAFLAQTSHETTGGWASAPDGPYAWGYCYLREQGSPGAYCVPSAQWPCAAGRKYYGRGPIQISYNYNYGQAGKAIGVDLVNNPDLVATDAVISFKTAFWFWMT 223          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 2.050e-51
Identity = 92/156 (58.97%), Postives = 114/156 (73.08%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            IIS   F+D+L + NDA CPARGFYTY+AFI AA++FPGFG +G+   RK+ +AAFF QT HETTGGW  AP G Y+WGYC+ ++  PAS             G +YYGRGP+QL+WN NY  CG  +GVDLLNNPDL+A D V++FK+AIWFWMT
Sbjct:   89 IISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMT 244          
BLAST of CF834650 vs. ExPASy Swiss-Prot
Match: CHI2_TOBAC (Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 1.329e-50
Identity = 93/156 (59.62%), Postives = 113/156 (72.44%), Query Frame = 1
Query:  124 IISREMFEDLLLYINDARCPARGFYTYDAFIEAAQAFPGFGNSGNETMRKR*IAAFFAQTGHETTGGWTDAPGGEYAWGYCYIRQVIPASSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGETLGVDLLNNPDLLATDPVLSFKSAIWFWMT 588
            IIS  MF+ +L + ND  C  +GFY+Y+AFI AA++FPGFG SG+ T RKR IAAFFAQT HETTGGW  AP G YAWGYC++R+                 PG +Y+GRGPIQ++ N NY  CG  +GVDLLNNPDL+ATDPV+SFKSA+WFWMT
Sbjct:   78 IISSSMFDQMLKHRNDNACQGKGFYSYNAFINAARSFPGFGTSGDTTARKREIAAFFAQTSHETTGGWATAPDGPYAWGYCWLREQGSPGDYCTPSGQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSALWFWMT 233          
The following BLAST results are available for this feature:
BLAST of CF834650 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 55
Match NameE-valueIdentityDescription
CHIT_PHAVU4.878e-5352.72Endochitinase OS=Phaseolus vulgaris PE=1 SV=1[more]
CHI5_PHAVU2.421e-5259.35Endochitinase CH5B OS=Phaseolus vulgaris PE=3 SV=1[more]
CHI2_GOSHI3.162e-5262.03Endochitinase 2 (Fragment) OS=Gossypium hirsutum P... [more]
CHI2_BRANA3.162e-5258.97Endochitinase CH25 OS=Brassica napus PE=2 SV=1[more]
CHI1_THECC3.162e-5248.23Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 S... [more]
CHI1_GOSHI3.162e-5262.03Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1[more]
CHIT_CARPA1.569e-5158.60Endochitinase OS=Carica papaya PE=1 SV=1[more]
CHIB_VITVI1.569e-5147.95Basic endochitinase OS=Vitis vinifera GN=CHIT1B PE... [more]
CHIB_ARATH2.050e-5158.97Basic endochitinase B OS=Arabidopsis thaliana GN=C... [more]
CHI2_TOBAC1.329e-5059.62Endochitinase B OS=Nicotiana tabacum GN=CHN50 PE=1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O05_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834650 ID=CF834650; Name=CF834650; organism=Citrus sinensis; type=EST; length=589bp
TTACTAATTTTCTCTCTACCCTTATCTTTTGTACTAGGAGGTTCAGCACA
GAATTGTGGAACCGGCGTTGTGTGCGGTGAACGTGATACTGGCCTCGGGA
CGGATGGCGGTGAACTGGGCAAGATCATCTCAAGGGAGATGTTTGAAGAC
TTGCTTCTGTATATAAATGATGCCCGATGCCCTGCCAGAGGCTTCTACAC
TTATGATGCTTTTATAGAGGCAGCCCAAGCTTTTCCAGGCTTTGGTAACT
CTGGAAATGAAACCATGCGTAAAAGATAAATTGCTGCCTTTTTTGCCCAA
ACTGGCCATGAAACTACTGGGGGATGGACCGATGCACCTGGTGGAGAATA
TGCTTGGGGATATTGCTATATTAGGCAAGTTATCCCTGCGTCGTCCGACT
ACTGTTATCCTTACTGTCCATGTCCCTTGCCAGGGCAATACTATGGCCGA
GGTCCAATTCAACTCACTTGGAATTGCAATTACTTAAGGTGCGGAGAAAC
CTTGGGGGTGGACTTGTTGAACAATCCAGACCTACTTGCCACTGATCCAG
TACTATCCTTCAAGTCAGCAATCTGGTTCTGGATGACTG
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