CF834662

Overview
NameCF834662
Unique NameCF834662
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length560
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3571 contig Csv1_Contig3571:447..1006. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_MESCR (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Mesembryanthemum crystallinum GN=METE PE=2 SV=1)

HSP 1 Score: 288.5 bits (737), Expect = 1.495e-77
Identity = 145/186 (77.96%), Postives = 160/186 (86.02%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            FIVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL+GPVSYLLLSK AKGV K+F              EV++ELK AGASWIQFDEPLLVMDL+SHKL AFS AYA+LESTLSGLNV+VETYFADV AEA++TL SLKGVT YGFDLVRGTKTL+L+K+ FP+GKYLFAGVVDGRNIWANDLA
Sbjct:  119 FIVPELGPEVNFSYASHKAVLEYKEAKALGVDTVPVLVGPVSYLLLSKQAKGVDKSFDLLSLLPKILPIYKEVVAELKEAGASWIQFDEPLLVMDLESHKLQAFSAAYADLESTLSGLNVVVETYFADVTAEAYKTLISLKGVTGYGFDLVRGTKTLDLVKAEFPSGKYLFAGVVDGRNIWANDLA 304          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_SOLSC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Solenostemon scutellarioides GN=MET PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 1.952e-77
Identity = 141/186 (75.81%), Postives = 161/186 (86.56%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            FIVPELGPDVKFSYASHKAV EYKEAK LGV+TVPVL+GPVSYL+LSKPAKGV KTF              EVI+ELKAAGASWIQFDEP LV+DL+SH+L AF++AYAELES+LSGL+ L+ETYFADVPA A++TLTSL G++ +GFDLVRG +T+ELIK GFP+GKYLFAGVVDGRNIWANDLA
Sbjct:  118 FIVPELGPDVKFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLILSKPAKGVEKTFPLLSLLDKILPIYKEVIAELKAAGASWIQFDEPTLVLDLESHQLDAFTKAYAELESSLSGLSTLIETYFADVPAPAYKTLTSLSGISGFGFDLVRGAQTIELIKGGFPSGKYLFAGVVDGRNIWANDLA 303          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_ARATH (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Arabidopsis thaliana GN=CIMS PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 3.330e-77
Identity = 143/186 (76.88%), Postives = 160/186 (86.02%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            +IVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL+GPVSYLLLSK AKGV K+F              EVI+ELKAAGA+WIQ DEP+LVMDL+  KL AF+ AYAELESTLSGLNVLVETYFAD+PAEA++TLTSLKGVTA+GFDLVRGTKTL+L+K+GFP GKYLFAGVVDGRNIWAND A
Sbjct:  119 YIVPELGPEVNFSYASHKAVNEYKEAKALGVDTVPVLVGPVSYLLLSKAAKGVDKSFELLSLLPKILPIYKEVITELKAAGATWIQLDEPVLVMDLEGQKLQAFTGAYAELESTLSGLNVLVETYFADIPAEAYKTLTSLKGVTAFGFDLVRGTKTLDLVKAGFPEGKYLFAGVVDGRNIWANDFA 304          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_CATRO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Catharanthus roseus GN=METE PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 7.419e-77
Identity = 140/186 (75.27%), Postives = 160/186 (86.02%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDLA 559
            +IVPELGP+V FSYASHKAV EYKEAK LGV+TVPVL+GPV++LLLSKPAKGV KTF              EVI ELKAAGASWIQFDEP LV+DL+SH+L AF++AY+ELESTLSGLNV+VETYFAD+PAE ++ LT+LKGVT +GFDLVRG KTL+LIK GFP+GKYLFAGVVDGRNIWANDLA
Sbjct:  119 YIVPELGPEVNFSYASHKAVNEYKEAKELGVDTVPVLVGPVTFLLLSKPAKGVEKTFPLLSLLDKILPVYKEVIGELKAAGASWIQFDEPTLVLDLESHQLEAFTKAYSELESTLSGLNVIVETYFADIPAETYKILTALKGVTGFGFDLVRGAKTLDLIKGGFPSGKYLFAGVVDGRNIWANDLA 304          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRPI (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus pneumoniae (strain Hungary19A-6) GN=metE PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.050e-30
Identity = 78/184 (42.39%), Postives = 106/184 (57.61%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP+   D +   A HK   E++EAK LG+ T PVL+GP ++L LS   +GV                  EV ++L   GA+ IQ DE  LV DL + +   F   Y +L +   GL VL++TYF DV  + +  L +L  V A GFD V G KTLEL+K GFPA K L+AG+V+G+NIW N+
Sbjct:  122 YIVPKFEKDTQVKLAGHKIFDEFQEAKELGLNTRPVLVGPFTFLQLSDFEEGVKAD----DFVDSLVAAYQEVFAKLAELGATCIQLDEAALVKDLTAEEKALFLNLYNKLLADKKGLEVLLQTYFGDV-RDVYADLVNLP-VDAIGFDFVEGKKTLELVKGGFPADKTLYAGIVNGKNIWRNN 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRAW (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces avermitilis GN=metE PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 5.210e-30
Identity = 83/188 (44.15%), Postives = 102/188 (54.26%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRG-TKTLELIKS--GFPAGKYLFAGVVDGRNIWANDL 556
            ++VPELGPD  FS  S K V E  EA  LG+   PVL+GPV+YLLL+KPA GVA  F              EV+++L+AAGA W+Q DEP LV D    +L+A   AY  L        +LV +YF D   +A   L     V     D   G    L+ + +  G P GK L AGVVDGRNIW NDL
Sbjct:  128 YLVPELGPDTVFSTDSAKQVAELGEALALGLTARPVLVGPVTYLLLAKPAPGVAADFDPLTLLDRLLPVYAEVLADLRAAGAEWVQLDEPALVQDRTPAELNAAERAYRVLGGLTDRPKLLVASYF-DRLGDALPVLAEAP-VEGLALDFAEGAAANLDALAAVGGLP-GKRLVAGVVDGRNIWVNDL 312          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRTD (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=metE PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 6.804e-30
Identity = 77/185 (41.62%), Postives = 107/185 (57.84%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGV-AKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP+         A HK   EY+EAK LG++T PV++GP ++L LS    GV A+ F              +V ++L   GA+ IQ DEP LV DL + +   F   Y ++ +   GL VL++TYF DV  + +  L +L  V A G D V G KTLEL+K GFPA K L+AG+V+G+NIW N+
Sbjct:  122 YIVPKFEKTTAVKLAGHKIFDEYQEAKDLGLDTRPVVVGPFTFLQLSDFEDGVKAEDFVDSFIAAYQ-----DVFAKLAELGATRIQLDEPALVKDLTADEKALFLNLYNKILADKKGLEVLIQTYFGDV-RDVYNDLVNLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYAGIVNGKNIWRNN 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRCO (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptomyces coelicolor GN=metE PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.161e-29
Identity = 80/187 (42.78%), Postives = 102/187 (54.55%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTS--LKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWANDL 556
            ++VPELGPD  F+  S K VTE  EA  LG+   PVL+GPV+YLLL+KPA G    F              EV+++L+AAGA W+Q DEP  V D    +L+A   AY EL +      +LV +YF D   +A   L    ++G+ A  F     T    L   G   GK L AGVV+GRNIW NDL
Sbjct:  128 YLVPELGPDTVFTADSTKQVTELAEAVALGLTARPVLVGPVTYLLLAKPAPGAPADFEPLTLLDRLLPVYAEVLTDLRAAGAEWVQLDEPAFVQDRTPAELNALERAYRELGALTDRPKLLVASYF-DRLGDALPVLAKAPIEGL-ALDFTDAAATNLDALAAVGGLPGKRLVAGVVNGRNIWINDL 312          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRSV (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus sanguinis (strain SK36) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.516e-29
Identity = 77/184 (41.85%), Postives = 103/184 (55.98%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP+   + +   A HK   E+ EAK LG+ T PV++GP + L +S    GVA                 EV ++L   GA  IQ DEP LV DL + +   F + Y +L +   GL VLV+TYF DV  + +  L  L  V A G D V G KTLEL+K GFPA K L+AG+V+G+NIW N+
Sbjct:  122 YIVPKFEKETQVKLAGHKIFDEFAEAKELGLVTRPVVVGPFTLLQVSDFEDGVAPA----DFVDALVVAYQEVFAKLAELGAERIQLDEPSLVKDLSAEEKALFLDLYKKLLADKKGLEVLVQTYFGDV-RDIYADLVQLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYAGIVNGKNIWRNN 299          
BLAST of CF834662 vs. ExPASy Swiss-Prot
Match: METE_STRGC (5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=metE PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 1.516e-29
Identity = 76/184 (41.30%), Postives = 103/184 (55.98%), Query Frame = 2
Query:    2 FIVPELGPDVKFSYASHKAVTEYKEAKGLGVETVPVLIGPVSYLLLSKPAKGVAKTFXXXXXXXXXXXXXXEVISELKAAGASWIQFDEPLLVMDLDSHKLHAFSEAYAELESTLSGLNVLVETYFADVPAEAFQTLTSLKGVTAYGFDLVRGTKTLELIKSGFPAGKYLFAGVVDGRNIWAND 553
            +IVP+   + +   A HK   E+ EAK LG+ T PV++GP + L +S    GVA                 EV ++L   GA  IQ DEP LV DL + +   F + Y +L +   GL VL++TYF DV  + +  L  L  V A G D V G KTLEL+K GFPA K L+AG+V+G+NIW N+
Sbjct:  122 YIVPKFEKETQVKLAGHKIFEEFAEAKELGLVTRPVVVGPFTLLQVSDFEDGVAPA----DFVDALATAYQEVFAKLAELGAKRIQLDEPSLVKDLSAEEKALFLDLYKKLLADKKGLEVLIQTYFGDV-RDIYSDLVQLP-VDAIGLDFVEGKKTLELVKGGFPADKTLYAGIVNGKNIWRNN 299          
The following BLAST results are available for this feature:
BLAST of CF834662 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 265
Match NameE-valueIdentityDescription
METE_MESCR1.495e-7777.965-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_SOLSC1.952e-7775.815-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_ARATH3.330e-7776.885-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_CATRO7.419e-7775.275-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRPI1.050e-3042.395-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRAW5.210e-3044.155-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRTD6.804e-3041.625-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRCO1.161e-2942.785-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRSV1.516e-2941.855-methyltetrahydropteroyltriglutamate--homocystein... [more]
METE_STRGC1.516e-2941.305-methyltetrahydropteroyltriglutamate--homocystein... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_05O13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05O13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834662 ID=CF834662; Name=CF834662; organism=Citrus sinensis; type=EST; length=560bp
TTTCATTGTTCCTGAATTGGGACCCGATGTTAAGTTCTCCTACGCTTCCC
ACAAGGCTGTGACTGAGTACAAGGAGGCTAAGGGGCTTGGAGTTGAAACT
GTCCCAGTGCTTATTGGCCCTGTGTCATACTTGTTGCTGTCTAAGCCTGC
CAAGGGTGTTGCGAAGACCTTTTCTCTTCTTTCTCTTCTTCCGAAAATCC
TTCCAATCTACAAGGAAGTTATTTCTGAGCTTAAGGCTGCTGGTGCTTCC
TGGATTCAGTTTGATGAGCCATTGCTTGTTATGGATCTTGACTCACACAA
ATTGCATGCATTCAGTGAGGCTTATGCCGAGCTAGAGTCAACTCTGTCTG
GCTTGAATGTTCTTGTTGAGACCTACTTTGCTGATGTTCCAGCTGAGGCA
TTCCAGACCCTCACTTCTTTGAAGGGTGTCACCGCTTATGGATTTGATTT
GGTTCGTGGAACGAAGACCCTTGAATTGATCAAGAGTGGATTCCCTGCTG
GCAAGTACCTCTTTGCTGGAGTGGTTGATGGAAGGAACATTTGGGCCAAT
GATCTTGCTG
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