CF834697

Overview
NameCF834697
Unique NameCF834697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length738
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10176 contig Csv1_Contig10176:37..774. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834697 vs. ExPASy Swiss-Prot
Match: MIRA_RICDU (Miraculin OS=Richadella dulcifica PE=1 SV=3)

HSP 1 Score: 99.7525 bits (247), Expect = 1.669e-20
Identity = 69/194 (35.57%), Postives = 99/194 (51.03%), Query Frame = 2
Query:   47 ATQPLLGISSNS-EPVLYIIGNKGKSTLEYKLIPVLHGAGGFSTHLGT--NGQ--CPLDVIQLSSPNERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCN--EEPLWKVDSYDDP----LIVTGGSEGHPRAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLLGD 589
            A  PLL  + ++  PVL I G K ++   Y ++PVL   GG  T   T  NG   CP  V+Q     +    L   P +N K  +V+VSTD+N+ F    +  PC      +W++D YD+      +  GG +G+P  ET+ +WFKIE+   F   G Y +V CP+VC SC  +C  +G+      RR L L D
Sbjct:   21 AANPLLSAADSAPNPVLDIDGEKLRTGTNYYIVPVLRDHGGGLTVSATTPNGTFVCPPRVVQTRKEVDHDRPLAFFP-ENPKEDVVRVSTDLNINFS---AFMPCRWTSSTVWRLDKYDESTGQYFVTIGGVKGNPGPETISSWFKIEE---FCGSGFYKLVFCPTVCGSCKVKCGDVGIYIDQKGRRRLALSD 207          
BLAST of CF834697 vs. ExPASy Swiss-Prot
Match: ASP_THECC (21 kDa seed protein OS=Theobroma cacao GN=ASP PE=2 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 1.082e-19
Identity = 63/179 (35.20%), Postives = 95/179 (53.07%), Query Frame = 2
Query:   80 SEPVLYIIGNKGKSTLEYKLIPVLHGAGGFSTHLG--TNGQCPLDVIQLSSPNERGDNLRLLPYDNYK-IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPRAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLLGDHE 595
            + PVL   G++ ++ ++Y ++  + GAGG    LG  T   CP  V+Q  S  + G  +     D+   +V+VSTDVN+ F V +  + C+   +W++D+YD+      + T G +G P   TL +WFKIEKAG       Y    CPSVC SC   C+ IG  + D  +  L L D+E
Sbjct:   28 NSPVLDTDGDELQTGVQYYVLSSISGAGGGGLALGRATGQSCPEIVVQRRSDLDNGTPVIFSNADSKDDVVRVSTDVNIEF-VPIRDRLCSTSTVWRLDNYDNSAGKWWVTTDGVKGEPGPNTLCSWFKIEKAGVLG----YKFRFCPSVCDSCTTLCSDIGRHSDDDGQIRLALSDNE 201          
BLAST of CF834697 vs. ExPASy Swiss-Prot
Match: SPI2_SOLTU (Serine protease inhibitor 2 OS=Solanum tuberosum PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.305e-12
Identity = 57/194 (29.38%), Postives = 98/194 (50.52%), Query Frame = 2
Query:   68 ISSNSEPVLYIIGNKGKSTLEYKLIPVLHGAGGFSTHLG----TNGQCPLDVIQLSSP-NERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL----IVTGGSEGHPRAETLLNWFKIEKAGNFSYGGVYNIVHCPSVCLSCPRRCNKIGVSTKDGVRRLLLLGDHEPALNVLF 616
            + S++ PVL + G +  S L Y++I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD  L    + TGG+ G   +    +WFKI K+    Y    N+++CP    S  + C+K+GV  ++G RRL L+  +E  L+VLF
Sbjct:    1 LPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLGY----NLLYCPVTSSSDDQFCSKVGVVHQNGKRRLALV--NENPLDVLF 183          
BLAST of CF834697 vs. ExPASy Swiss-Prot
Match: SPI7_SOLTU (Serine protease inhibitor 7 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.850e-11
Identity = 56/194 (28.87%), Postives = 98/194 (50.52%), Query Frame = 2
Query:   62 LGISSNSEPVLYIIGNKGKSTLEYKLIPVLHGAGGFSTHLG----TNGQCPLDVIQLSSP-NERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPRAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNKIGVSTKDGVRRLLLLGDH 592
            + + S++ PVL + G +  S L Y++I    GA G   +LG    ++  C   + + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD      L+ TGG+ G   +    +WFKI K+  F     YN+++CP +  +SCP     + C K+GV  ++G RRL L+ D+
Sbjct:   27 INLPSDATPVLDVAGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGIFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQFG----YNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211          
BLAST of CF834697 vs. ExPASy Swiss-Prot
Match: LSPI_CARPA (Latex serine proteinase inhibitor OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.122e-11
Identity = 59/191 (30.89%), Postives = 94/191 (49.21%), Query Frame = 2
Query:   47 ATQPLLGISSNSEPVLYIIGNKGKSTLEYKLIPVLHGAGGFSTHL---GTNGQCPLDVIQLSSPNERGDNLRLLPYDNYK--IVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYDDPL---IVTGGSEGHPRAETLLNWFKIEKAG-NFSYGGVYNIVHCPSVCLSCPRRCNKIGV-STKDGVRRLLLLGD 589
            A +P++ I  + +PVLY +        +Y ++  + GAGG    +   G   +CPL V+Q   P + G+ +      N K  IV  S D+N++F + ++   CNE   WKVD +   +   +  GG +G+   E+  + FKI+KAG  FS    Y    CPS   +    CN + +   K  +RRL+L  D
Sbjct:    2 APKPIVDI--DGKPVLYGV--------DYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ--DPFDNGEPIIFSAIKNVKDNIVFESVDLNVKFNITIN---CNETTAWKVDRFPGVIGWTVTLGGEKGYHGFESTHSMFKIKKAGLPFS----YKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILTND 173          
BLAST of CF834697 vs. ExPASy Swiss-Prot
Match: SPI1_SOLTU (Serine protease inhibitor 1 OS=Solanum tuberosum PE=1 SV=2)

HSP 1 Score: 68.1662 bits (165), Expect = 5.383e-11
Identity = 57/198 (28.79%), Postives = 99/198 (50.00%), Query Frame = 2
Query:   50 TQPLLGISSNSEPVLYIIGNKGKSTLEYKLIPVLHGAGGFSTHLG----TNGQCPLDVIQLSSP-NERGDNLRLLPYDNY--KIVKVSTDVNLRFPVKVSVKPCNEEPLWKVDSYD----DPLIVTGGSEGHPRAETLLNWFKIEKAGNFSYGGVYNIVHCP-SVCLSCP-----RRCNKIGVSTKDGVRRLLLLGDH 592
            +Q  + + S++ PVL + G +  S L Y++I    GA G   +LG    ++  C   V + +S     G  +R +   ++  + +  +  +N++F +  S K C    +WKV  YD      L+ TGG+ G   +    +WFKI K+        YN+++CP +  +SCP     + C K+GV  ++G RRL L+ D+
Sbjct:   23 SQNPINLPSDATPVLDVTGKELDSRLSYRIISTFWGALGGDVYLGKSPNSDAPCANGVFRYNSDVGPSGTPVRFIGSSSHFGQGIFENELLNIQFAISTS-KLCVSYTIWKVGDYDASLGTMLLETGGTIGQADS----SWFKIVKSSQLG----YNLLYCPVTSTMSCPFSSDDQFCLKVGVVHQNGKRRLALVKDN 211          
The following BLAST results are available for this feature:
BLAST of CF834697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
MIRA_RICDU1.669e-2035.57Miraculin OS=Richadella dulcifica PE=1 SV=3[more]
ASP_THECC1.082e-1935.2021 kDa seed protein OS=Theobroma cacao GN=ASP PE=2... [more]
SPI2_SOLTU8.305e-1229.38Serine protease inhibitor 2 OS=Solanum tuberosum P... [more]
SPI7_SOLTU1.850e-1128.87Serine protease inhibitor 7 OS=Solanum tuberosum P... [more]
LSPI_CARPA4.122e-1130.89Latex serine proteinase inhibitor OS=Carica papaya... [more]
SPI1_SOLTU5.383e-1128.79Serine protease inhibitor 1 OS=Solanum tuberosum P... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_05P17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa05P17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834697 ID=CF834697; Name=CF834697; organism=Citrus sinensis; type=EST; length=738bp
GAAGACTTCATCGATAACAACACTCTCCTTCCTTATCCTTACCTTGGCCA
CGCAGCCTCTATTGGGCATCTCATCAAACTCTGAACCTGTCTTATATATC
ATTGGCAACAAGGGCAAATCCACCCTCGAGTATAAACTTATCCCAGTCCT
ACATGGCGCCGGTGGATTCAGCACACACCTAGGCACAAATGGACAGTGTC
CCTTGGACGTTATCCAATTAAGTTCTCCTAACGAAAGGGGAGATAATTTA
AGATTACTTCCGTACGACAATTACAAAATTGTCAAGGTATCCACTGATGT
CAACCTGAGATTCCCCGTAAAAGTTTCTGTTAAGCCCTGTAATGAAGAAC
CATTGTGGAAAGTTGATAGCTATGACGATCCATTAATTGTAACCGGCGGA
AGTGAGGGCCACCCAAGAGCTGAAACGTTGCTAAATTGGTTTAAGATTGA
GAAAGCTGGAAATTTTTCATATGGTGGTGTATACAATATTGTCCATTGTC
CGAGTGTCTGTCTATCTTGTCCTAGACGCTGCAACAAAATTGGCGTTTCA
ACTAAGGATGGCGTTCGACGTCTGCTTCTACTTGGTGATCATGAACCGGC
TTTGAATGTTCTGTTTTTTCCATCAGAGGAAAGCTCAAGGCTACTTCAAG
CTGCTAACGCAATATCAAGGTTTTTTGAAGCTGCTGAAGCAATATCAATG
ACCGCGTAATGAATGAACTTAGCTGTATCATTCTAAAT
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