CF834711

Overview
NameCF834711
Unique NameCF834711
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length693
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1217 contig Csv1_Contig1217:281..973. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX2_ORYSJ (L-ascorbate peroxidase 2, cytosolic OS=Oryza sativa subsp. japonica GN=APX2 PE=1 SV=1)

HSP 1 Score: 258.07 bits (658), Expect = 3.290e-68
Identity = 128/171 (74.85%), Postives = 138/171 (80.70%), Query Frame = -2
Query:  228 RLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAE 680
            RLL+P K+Q P +SYAD YQLAGVV VEVTGGP++PFHPGR DK EPP EGRLPDA QG+DHLRQVF AQMGLSDKDIVALSGGHTLGRCHKER                    EL++GEK+GLLQLPSDKAL+ DP FRPLVEKYAADEDAFF DYAEAHLKLSELGFAE
Sbjct:   80 RLLDPIKDQLPILSYADFYQLAGVVAVEVTGGPEVPFHPGRQDKPEPPPEGRLPDATQGSDHLRQVFSAQMGLSDKDIVALSGGHTLGRCHKERSGFEGAWTSNPLIFDNSYFTELVSGEKEGLLQLPSDKALMADPAFRPLVEKYAADEDAFFADYAEAHLKLSELGFAE 250          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX1_PEA (L-ascorbate peroxidase, cytosolic OS=Pisum sativum GN=APX1 PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 6.204e-67
Identity = 127/172 (73.84%), Postives = 136/172 (79.07%), Query Frame = -2
Query:  225 RLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 680
            RLLEP KEQFP +SYAD YQLAGVV VE+TGGP++PFHPGR+DK EPP EGRLPDA +G+DHLR VFG  MGLSD+DIVALSGGHT+G  HKER                    ELLTGEKDGLLQLPSDKALL D VFRPLVEKYAADED FF DYAEAHLKLSELGFAEA
Sbjct:   79 RLLEPIKEQFPIVSYADFYQLAGVVAVEITGGPEVPFHPGREDKPEPPPEGRLPDATKGSDHLRDVFGKAMGLSDQDIVALSGGHTIGAAHKERSGFEGPWTSNPLIFDNSYFTELLTGEKDGLLQLPSDKALLTDSVFRPLVEKYAADEDVFFADYAEAHLKLSELGFAEA 250          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX1_ARATH (L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis thaliana GN=APX1 PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 6.204e-67
Identity = 127/172 (73.84%), Postives = 139/172 (80.81%), Query Frame = -2
Query:  225 RLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 680
            RLL+P +EQFPTIS+AD +QLAGVV VEVTGGPDIPFHPGR+DK +PP EGRLPDA +G DHLR VF  QMGLSDKDIVALSG HTLGRCHK+R                    ELL+GEK+GLLQL SDKALLDDPVFRPLVEKYAADEDAFF DYAEAH+KLSELGFA+A
Sbjct:   79 RLLDPIREQFPTISFADFHQLAGVVAVEVTGGPDIPFHPGREDKPQPPPEGRLPDATKGCDHLRDVFAKQMGLSDKDIVALSGAHTLGRCHKDRSGFEGAWTSNPLIFDNSYFKELLSGEKEGLLQLVSDKALLDDPVFRPLVEKYAADEDAFFADYAEAHMKLSELGFADA 250          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX1_ORYSJ (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. japonica GN=APX1 PE=1 SV=1)

HSP 1 Score: 253.062 bits (645), Expect = 1.058e-66
Identity = 126/172 (73.26%), Postives = 138/172 (80.23%), Query Frame = -2
Query:  225 RLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 680
            R+LEP KE+ PTISYAD YQLAGVV VEV+GGP +PFHPGR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKER                    ELL+G+K+GLLQLPSDKALL DP FRPLVEKYAADE AFF DY EAHLKLSELGFA+A
Sbjct:   79 RMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFRPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX1_ORYSI (L-ascorbate peroxidase 1, cytosolic OS=Oryza sativa subsp. indica GN=APX1 PE=2 SV=1)

HSP 1 Score: 249.98 bits (637), Expect = 8.958e-66
Identity = 125/172 (72.67%), Postives = 137/172 (79.65%), Query Frame = -2
Query:  225 RLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAEA 680
            R+LEP KE+ PTISYAD YQLAGVV VEV+GGP +PFHPGR+DK  PP EGRLPDA +G+DHLRQVFGAQMGLSD+DIVALSGGHTLGRCHKER                    ELL+G+K+GLLQLPSDKALL DP F PLVEKYAADE AFF DY EAHLKLSELGFA+A
Sbjct:   79 RMLEPIKEEIPTISYADFYQLAGVVAVEVSGGPAVPFHPGREDKPAPPPEGRLPDATKGSDHLRQVFGAQMGLSDQDIVALSGGHTLGRCHKERSGFEGPWTRNPLQFDNSYFTELLSGDKEGLLQLPSDKALLSDPAFCPLVEKYAADEKAFFEDYKEAHLKLSELGFADA 250          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX2_ARATH (L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis thaliana GN=APX2 PE=2 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 9.271e-63
Identity = 121/171 (70.76%), Postives = 134/171 (78.36%), Query Frame = -2
Query:  228 RLLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGFAE 680
            RLL+P KE FP +SYAD YQLAGVV VE+TGGP+IPFHPGR DK EPP EGRLP A +G DHLR VFG +MGL+DKDIVALSGGHTLGRCHKER                    E+L+GEK+GLLQLP+DKALLDDP+F P VEKYAADEDAFF DY EAHLKLSELGFA+
Sbjct:   80 RLLDPIKELFPILSYADFYQLAGVVAVEITGGPEIPFHPGRLDKVEPPPEGRLPQATKGVDHLRDVFG-RMGLNDKDIVALSGGHTLGRCHKERSGFEGAWTPNPLIFDNSYFKEILSGEKEGLLQLPTDKALLDDPLFLPFVEKYAADEDAFFEDYTEAHLKLSELGFAD 249          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX3_ARATH (L-ascorbate peroxidase 3, peroxisomal OS=Arabidopsis thaliana GN=APX3 PE=1 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 4.040e-50
Identity = 109/168 (64.88%), Postives = 118/168 (70.24%), Query Frame = -2
Query:  234 LLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 677
            L E  K + P I+YADLYQLAGVV VEVTGGPDI F PGR D    P+EGRLPDAKQG  HLR VF  +MGLSDKDIVALSGGHTLGR H ER                    ELL GE +GLL+LP+DK LL+DP FR LVE YA DEDAFF DYAE+H KLSELGF
Sbjct:   78 LCEGVKAKHPKITYADLYQLAGVVAVEVTGGPDIVFVPGRKDSNVCPKEGRLPDAKQGFQHLRDVF-YRMGLSDKDIVALSGGHTLGRAHPERSGFDGPWTQEPLKFDNSYFVELLKGESEGLLKLPTDKTLLEDPEFRRLVELYAKDEDAFFRDYAESHKKLSELGF 244          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX4_ORYSJ (Probable L-ascorbate peroxidase 4 OS=Oryza sativa subsp. japonica GN=APX4 PE=2 SV=1)

HSP 1 Score: 195.282 bits (495), Expect = 2.619e-49
Identity = 105/168 (62.50%), Postives = 119/168 (70.83%), Query Frame = -2
Query:  234 LLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 677
            LLEP K + P I+YADLYQLAGVV VEVTGGP + F PGR D +  P+EGRLPDAK+G  HLR +F  +MGLSDKDIVALSGGHTLGR H ER                    ELL GE +GLL+LP+DKALL+DP FR  V+ YA DED FF DYAE+H KLSELGF
Sbjct:   78 LLEPIKAKSPKITYADLYQLAGVVAVEVTGGPTVEFIPGRRDSSVCPREGRLPDAKKGALHLRDIF-YRMGLSDKDIVALSGGHTLGRAHPERSGFEGAWTQEPLKFDNSYFLELLKGESEGLLKLPTDKALLEDPSFRRYVDLYARDEDTFFKDYAESHKKLSELGF 244          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX3_ORYSJ (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. japonica GN=APX3 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.619e-49
Identity = 103/168 (61.31%), Postives = 120/168 (71.43%), Query Frame = -2
Query:  234 LLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 677
            LLEP K++ P I+YADLYQLAGVV VEVTGGP I + PGR D ++ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ER                    ELL    +GLL+LP+DKAL++DP FR  VE YA DEDAFF DYAE+H KLSELGF
Sbjct:   79 LLEPMKQKHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
BLAST of CF834711 vs. ExPASy Swiss-Prot
Match: APX3_ORYSI (Probable L-ascorbate peroxidase 3 OS=Oryza sativa subsp. indica GN=APX3 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 7.619e-49
Identity = 103/168 (61.31%), Postives = 120/168 (71.43%), Query Frame = -2
Query:  234 LLEPFKEQFPTISYADLYQLAGVVGVEVTGGPDIPFHPGRDDKAEPPQEGRLPDAKQGNDHLRQVFGAQMGLSDKDIVALSGGHTLGRCHKER--------------------ELLTGEKDGLLQLPSDKALLDDPVFRPLVEKYAADEDAFFTDYAEAHLKLSELGF 677
            LLEP K++ P I+YADLYQLAGVV VEVTGGP I + PGR D ++ P+EGRLPDAK+G  HLR+VF  +MGLSDKDIVALSGGHTLG+   ER                    ELL    +GLL+LP+DKAL++DP FR  VE YA DEDAFF DYAE+H KLSELGF
Sbjct:   79 LLEPMKQRHPKITYADLYQLAGVVAVEVTGGPTIDYVPGRRDSSDSPEEGRLPDAKKGAAHLREVF-YRMGLSDKDIVALSGGHTLGKARPERSGFDGAWTKDPLKFDNSYFIELLKENSEGLLKLPTDKALVEDPTFRRYVELYAKDEDAFFRDYAESHKKLSELGF 245          
The following BLAST results are available for this feature:
BLAST of CF834711 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
APX2_ORYSJ3.290e-6874.85L-ascorbate peroxidase 2, cytosolic OS=Oryza sativ... [more]
APX1_PEA6.204e-6773.84L-ascorbate peroxidase, cytosolic OS=Pisum sativum... [more]
APX1_ARATH6.204e-6773.84L-ascorbate peroxidase 1, cytosolic OS=Arabidopsis... [more]
APX1_ORYSJ1.058e-6673.26L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX1_ORYSI8.958e-6672.67L-ascorbate peroxidase 1, cytosolic OS=Oryza sativ... [more]
APX2_ARATH9.271e-6370.76L-ascorbate peroxidase 2, cytosolic OS=Arabidopsis... [more]
APX3_ARATH4.040e-5064.88L-ascorbate peroxidase 3, peroxisomal OS=Arabidops... [more]
APX4_ORYSJ2.619e-4962.50Probable L-ascorbate peroxidase 4 OS=Oryza sativa ... [more]
APX3_ORYSJ7.619e-4961.31Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]
APX3_ORYSI7.619e-4961.31Probable L-ascorbate peroxidase 3 OS=Oryza sativa ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06A01_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834711 ID=CF834711; Name=CF834711; organism=Citrus sinensis; type=EST; length=693bp
TTTTTTTTAGTCTGAAAAAAGTTGATATTATTAGTTCTAAAGGATGATAG
TAACCATAGTATTCGACCCAACTTTTCACAATCCACCATGTGCAACAAAA
CAAAACCACAAAATTCAACCAACAACATCTTGAAATTCGAATTTTCTGAG
AATTCAAAAAACATAAAATAGAGGCACACTGTTGTTGGCATCATTCCAAC
CATTTATTTACTCAGGTAACTTTAGGCTTCGGCAAATCCTAGCTCAGAGA
GCTTGAGATGAGCCTCAGCATAATCAGTGAAGAAAGCGTCCTCATCCGCA
GCATATTTCTCAACAAGAGGGCGGAAAACAGGGTCATCCAGAAGGGCCTT
GTCAGATGGCAATTGCAGAAGACCATCCTTCTCACCAGTCAAGAGCTCCC
TCTCCTTGTGGCACCTTCCCAGGGTGTGGCCACCAGAGAGAGCAACAATA
TCCTTGTCGCTGAGGCCCATCTGAGCACCGAAGACTTGCCTCAAGTGATC
ATTACCCTGTTTAGCATCAGGAAGCCGGCCTTCTTGAGGTGGCTCAGCCT
TGTCATCTCTTCCAGGGTGGAAGGGGATATCGGGCCCACCGGTAACCTCA
ACGCCAACAACACCAGCAAGCTGATAAAGGTCAGCGTANGAGATGGTAGG
GAACTGCTCCTTGAACGGCTCCAAAAGCCTACGGCAATATCGA
back to top