CF834725

Overview
NameCF834725
Unique NameCF834725
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13137 contig Csv1_Contig13137:48..721. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_MESCR (V-type proton ATPase 16 kDa proteolipid subunit OS=Mesembryanthemum crystallinum GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.607e-56
Identity = 120/164 (73.17%), Postives = 122/164 (74.39%), Query Frame = 1
Query:  106 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            ST+F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 STVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_BETVU (V-type proton ATPase 16 kDa proteolipid subunit OS=Beta vulgaris GN=VMAC1 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.607e-56
Identity = 120/164 (73.17%), Postives = 122/164 (74.39%), Query Frame = 1
Query:  106 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            ST+F+GDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 STVFNGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_KALDA (V-type proton ATPase 16 kDa proteolipid subunit OS=Kalanchoe daigremontiana PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.098e-56
Identity = 123/166 (74.10%), Postives = 123/166 (74.10%), Query Frame = 1
Query:  100 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            MSST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    1 MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL4_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c4 OS=Arabidopsis thaliana GN=VHA-C4 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 4.674e-56
Identity = 120/166 (72.29%), Postives = 123/166 (74.10%), Query Frame = 1
Query:  100 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            M+S+ FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    1 MASSGFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 166          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_GOSHI (V-type proton ATPase 16 kDa proteolipid subunit OS=Gossypium hirsutum GN=CVA16-2 PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 6.105e-56
Identity = 122/166 (73.49%), Postives = 123/166 (74.10%), Query Frame = 1
Query:  100 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            MSST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    1 MSST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_ORYSJ (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. japonica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.973e-56
Identity = 119/164 (72.56%), Postives = 121/164 (73.78%), Query Frame = 1
Query:  106 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_ORYSI (V-type proton ATPase 16 kDa proteolipid subunit OS=Oryza sativa subsp. indica GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.973e-56
Identity = 119/164 (72.56%), Postives = 121/164 (73.78%), Query Frame = 1
Query:  106 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK YYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAASALIFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYYLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_PHAAU (V-type proton ATPase 16 kDa proteolipid subunit OS=Phaseolus aureus PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.041e-55
Identity = 119/161 (73.91%), Postives = 119/161 (73.91%), Query Frame = 1
Query:  115 FSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    4 FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 164          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL2_ARATH (V-type proton ATPase 16 kDa proteolipid subunit c2 OS=Arabidopsis thaliana GN=VHA-C2 PE=2 SV=1)

HSP 1 Score: 216.083 bits (549), Expect = 1.360e-55
Identity = 121/166 (72.89%), Postives = 123/166 (74.10%), Query Frame = 1
Query:  100 MSSTLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            M+ST FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRA+
Sbjct:    1 MAST-FSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYAHLSSGLACGLAGLSAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAE 165          
BLAST of CF834725 vs. ExPASy Swiss-Prot
Match: VATL_AVESA (V-type proton ATPase 16 kDa proteolipid subunit OS=Avena sativa GN=VATP-P1 PE=2 SV=1)

HSP 1 Score: 215.312 bits (547), Expect = 2.320e-55
Identity = 118/164 (71.95%), Postives = 121/164 (73.78%), Query Frame = 1
Query:  106 STLFSGDETAPXXXXXXXXXXXXXSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKSYYLFDGYXXXXXXXXXXXXXXXXXMAIGIVGDAGVRANAQQPKLFVGMXXXXXXXXXXXXYGLIVGIILSSRAGQSRAD 597
            S++FSGDETAP             SCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAK Y+LFDGY                 MAIGIVGDAGVRANAQQPKLFVGM            YGLIVGIILSSRAGQSRAD
Sbjct:    2 SSVFSGDETAPFFGFLGAAAALVFSCMGAAYGTAKSGVGVASMGVMRPELVMKSIVPVVMAGVLGIYGLIIAVIISTGINPKAKPYFLFDGYAHLSSGLACGLAGLAAGMAIGIVGDAGVRANAQQPKLFVGMILILIFAEALALYGLIVGIILSSRAGQSRAD 165          
The following BLAST results are available for this feature:
BLAST of CF834725 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 44
Match NameE-valueIdentityDescription
VATL_MESCR1.607e-5673.17V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_BETVU1.607e-5673.17V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_KALDA2.098e-5674.10V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL4_ARATH4.674e-5672.29V-type proton ATPase 16 kDa proteolipid subunit c4... [more]
VATL_GOSHI6.105e-5673.49V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSJ7.973e-5672.56V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_ORYSI7.973e-5672.56V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL_PHAAU1.041e-5573.91V-type proton ATPase 16 kDa proteolipid subunit OS... [more]
VATL2_ARATH1.360e-5572.89V-type proton ATPase 16 kDa proteolipid subunit c2... [more]
VATL_AVESA2.320e-5571.95V-type proton ATPase 16 kDa proteolipid subunit OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834725 ID=CF834725; Name=CF834725; organism=Citrus sinensis; type=EST; length=674bp
TTTAGAACTCTTTAGTCTCCTCTTGAGAGAAAGAGCACAGAACGAATAAC
GAAAACAAAACACACGCTCAAGTCTCAGATCCAGTCCGCATCTCCCAAGA
TGTCTTCAACATTATTCAGTGGCGATGAAACCGCTCCTTTCTTCGGCTTT
CTCGGCGCCGCTGCCGCCCTAGTCTTTTCCTGTATGGGAGCTGCGTACGG
AACGGCGAAGAGTGGCGTCGGTGTGGCGTCGATGGGAGTGATGAGGCCGG
AGCTTGTGATGAAATCGATCGTGCCCGTTGTTATGGCGGGAGTTTTGGGT
ATTTACGGTTTGATTATTGCTGTTATTATTAGTACCGGAATTAACCCTAA
GGCCAAATCTTATTACCTTTTCGATGGCTACGCGCATCTCTCTTCTGGCC
TCGCTTGTGGCCTTGCTGGTCTCTCCGCTGGTATGGCAATTGGGATCGTC
GGTGATGCTGGTGTCAGAGCCAATGCTCAACAGCCGAAGCTTTTCGTTGG
GATGATCCTCATTCTGATCTTTGCTGAAGCGCTGGCACTTTATGGACTTA
TTGTTGGTATCATTCTTTCTTCTCGTGCTGGTCAGTCAAGAGCAGACTAG
AAGAGGATGCTTTGCTTGGTGTTTATTTGGCCTGTTGTGTTCCATTAAGA
AGAATTCAGTTCATATTGCCTGTG
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