CF834734
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834734 vs. ExPASy Swiss-Prot
Match: CT030_CHICK (UPF0414 transmembrane protein C20orf30 homolog OS=Gallus gallus GN=RCJMB04_6c24 PE=2 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.349e-12 Identity = 37/77 (48.05%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 208 PIKEIVLAVSLLVFGTFGIICGTIMAYNRV---GGDRAHGVFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFNNIP 429 P K I LAV L + GTF II G ++ + G DRA V ++G ++F+PGFY+ RIAYYA KGY+G+S+++IP Sbjct: 42 PYKAIALAVVLFMIGTFLIIIGALLLAGYISKGGTDRAIPVL--IIGILVFLPGFYHLRIAYYASKGYRGYSYDDIP 116
BLAST of CF834734 vs. ExPASy Swiss-Prot
Match: CT030_RAT (UPF0414 transmembrane protein C20orf30 homolog OS=Rattus norvegicus PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.375e-12 Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 208 PIKEIVLAVSLLVFGTFGIICGTIMAYNRV---GGDRAHGVFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFNNIP 429 P K I LA L + GTF II G+++ + G DRA V ++G ++F+PGFY+ RIAYYA KGY+G+S+++IP Sbjct: 42 PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRIAYYASKGYRGYSYDDIP 116
BLAST of CF834734 vs. ExPASy Swiss-Prot
Match: CT030_MOUSE (UPF0414 transmembrane protein C20orf30 homolog OS=Mus musculus PE=1 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 4.375e-12 Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 1 Query: 208 PIKEIVLAVSLLVFGTFGIICGTIMAYNRV---GGDRAHGVFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFNNIP 429 P K I LA L + GTF II G+++ + G DRA V ++G ++F+PGFY+ RIAYYA KGY+G+S+++IP Sbjct: 42 PYKAIALATVLFLIGTFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRIAYYASKGYRGYSYDDIP 116
BLAST of CF834734 vs. ExPASy Swiss-Prot
Match: CT030_PONAB (UPF0414 transmembrane protein C20orf30 homolog OS=Pongo abelii PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 9.746e-12 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 208 PIKEIVLAVSLLVFGTFGIICGTIMAYNRV---GGDRAHGVFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFNNIP 429 P K I LA L + G F II G+++ + G DRA V ++G ++F+PGFY+ RIAYYA KGY+G+S+++IP Sbjct: 42 PYKAIALATGLFLIGAFLIIIGSLLLSGYISKGGADRAIPVL--IIGILVFLPGFYHLRIAYYASKGYRGYSYDDIP 116
BLAST of CF834734 vs. ExPASy Swiss-Prot
Match: CT030_HUMAN (UPF0414 transmembrane protein C20orf30 OS=Homo sapiens GN=C20orf30 PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 208 PIKEIVLAVSLLVFGTFGIICGTIMAYNRV---GGDRAHGVFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFNNIP 429 P K I LA L + G F II G+++ + G DRA V ++G ++F+PGFY+ RIAYYA KGY+G+S+++IP Sbjct: 42 PYKAIALATVLFLIGAFLIIIGSLLLSGYISKGGADRAVPVL--IIGILVFLPGFYHLRIAYYASKGYRGYSYDDIP 116
BLAST of CF834734 vs. ExPASy Swiss-Prot
Match: CT030_BOVIN (UPF0414 transmembrane protein C20orf30 homolog OS=Bos taurus PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 1.662e-11 Identity = 35/77 (45.45%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 208 PIKEIVLAVSLLVFGTFGIICGTIMAYNRV---GGDRAHGVFFAVLGAILFIPGFYYTRIAYYAYKGYKGFSFNNIP 429 P K I LA L + G F II G+++ + G DRA V ++G ++F+PGFY+ RIAYYA KGY+G+S+++IP Sbjct: 42 PYKAIALATVLFLIGAFLIIIGSLLLAGYISKGGADRAVPVL--IIGILVFLPGFYHLRIAYYASKGYRGYSYDDIP 116 The following BLAST results are available for this feature:
BLAST of CF834734 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834734 ID=CF834734; Name=CF834734; organism=Citrus sinensis; type=EST; length=602bpback to top |