CF834741

Overview
NameCF834741
Unique NameCF834741
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length638
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6651 contig Csv1_Contig6651:475..1112. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834741 vs. ExPASy Swiss-Prot
Match: PPA1_SOLLC (Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1 PE=2 SV=1)

HSP 1 Score: 158.303 bits (399), Expect = 3.045e-38
Identity = 74/158 (46.84%), Postives = 103/158 (65.19%), Query Frame = -1
Query:  165 QSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAXXXXXXXXXXXXXXXLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRTFKLPDPM 638
            +S+ L  DG+++W+FD+DET LSNLPYY+ + +G++ ++   F++WV  G A               LG K+  LTGR E  R+VT  NL +AGF  W KLIL+GS   G+TA  YKS  R  +  +G+RI+GN GDQWSDLLG++   R+FKLP+PM
Sbjct:   94 KSVDLGDDGRDVWIFDVDETLLSNLPYYSDHRYGLEVFDDVEFDKWVENGTAPALGSSLKLYQEVLKLGFKVFLLTGRSERHRSVTVENLMNAGFHDWHKLILRGSDDHGKTATTYKSERRNAMVEEGFRIVGNSGDQWSDLLGSSMSYRSFKLPNPM 251          
BLAST of CF834741 vs. ExPASy Swiss-Prot
Match: VSPB_SOYBN (Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE=2 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 4.396e-37
Identity = 81/149 (54.36%), Postives = 102/149 (68.46%), Query Frame = -1
Query:  165 NIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAXXXXXXXXXXXXXXXLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG-NRTFKLPDPM 608
            +I++F ID T LSN+PYY K+G+GV+ +N TL++EWVN G A               LG KIVFL+GR  D+  VTEANLK AGF TWE+LILK        A+ YKS+ R+ L  +GYRI+G IGDQWSDLLG + G +RTFKLP+PM
Sbjct:  102 DIFIFGIDNTVLSNIPYYEKHGYGVEEFNETLYDEWVNKGDAPALPETLKNYNKLLSLGFKIVFLSGRYLDKMAVTEANLKKAGFHTWEQLILKDPHLITPNALSYKSAMRENLLRQGYRIVGIIGDQWSDLLGDHRGESRTFKLPNPM 250          
BLAST of CF834741 vs. ExPASy Swiss-Prot
Match: VSPA_SOYBN (Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 5.742e-37
Identity = 81/151 (53.64%), Postives = 104/151 (68.87%), Query Frame = -1
Query:  165 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAXXXXXXXXXXXXXXXLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKG-SSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG-NRTFKLPDPM 611
            K+ +VF ID T LSN+PYY K+G+GV+ +N TL++EWVN G A               LG KI+FL+GR  D++ VTEANLK AG+ TWEKLILK     S   AV YK++ R+KL  +GY I+G IGDQWSDLLG + G +RTFKLP+P+
Sbjct:  100 KDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLPNPL 250          
BLAST of CF834741 vs. ExPASy Swiss-Prot
Match: S25K_SOYBN (Stem 31 kDa glycoprotein (Fragment) OS=Glycine max GN=VSP25 PE=2 SV=2)

HSP 1 Score: 153.295 bits (386), Expect = 9.794e-37
Identity = 81/150 (54.00%), Postives = 103/150 (68.67%), Query Frame = -1
Query:  168 KNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKAXXXXXXXXXXXXXXXLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKG-SSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAG-NRTFKLPDP 611
            K+ +VF ID T LSN+PYY K+G+GV+ +N TL++EWVN G A               LG KI+FL+GR  D++ VTEANLK AG+ TWEKLILK     S   AV YK++ R+KL  +GY I+G IGDQWSDLLG + G +RTFKLP+P
Sbjct:   97 KDTFVFSIDGTVLSNIPYYKKHGYGVEKFNSTLYDEWVNKGNAPALPETLKNYNKLVSLGFKIIFLSGRTLDKQAVTEANLKKAGYHTWEKLILKDPQDPSTPNAVSYKTAAREKLIRQGYNIVGIIGDQWSDLLGGHRGESRTFKLPNP 246          
BLAST of CF834741 vs. ExPASy Swiss-Prot
Match: VSP2_ARATH (Vegetative storage protein 2 OS=Arabidopsis thaliana GN=VSP2 PE=1 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 1.567e-26
Identity = 68/159 (42.77%), Postives = 93/159 (58.49%), Query Frame = -1
Query:  165 QSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTG-KAXXXXXXXXXXXXXXXLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRTFKLPDPM 638
            + L L  D  N+W+FD+D+T LS++PYYAK G+G +  +P  +  W+ TG                  LGI+ + L+ R +  +NVT  NL+ AG   W+ LILK +  S    VVYKS  RK L  KGY I+GNIGDQW+DL+    G R FKLP+P+
Sbjct:  104 KGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTEKTDPGAYWLWLGTGASTPGLPEALHLYQNIIELGIEPIILSDRWKLWKNVTLDNLEAAGVTYWKHLILKPNG-SNLRQVVYKSKVRKSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPL 260          
BLAST of CF834741 vs. ExPASy Swiss-Prot
Match: VSP1_ARATH (Vegetative storage protein 1 OS=Arabidopsis thaliana GN=VSP1 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.733e-25
Identity = 65/159 (40.88%), Postives = 91/159 (57.23%), Query Frame = -1
Query:  165 QSLKLAGDGKNIWVFDIDETSLSNLPYYAKNGFGVKPYNPTLFNEWVNTGKA-XXXXXXXXXXXXXXXLGIKIVFLTGRPEDQRNVTEANLKHAGFDTWEKLILKGSSHSGETAVVYKSSERKKLEMKGYRIIGNIGDQWSDLLGTNAGNRTFKLPDPM 638
            + L L  D  N+W+FD+D+T LS++PYYAK G+G +   P  +  W+ +G++                LGI+ + ++ R +    VT  NLK  G   W+ LILK +  S  T VVYKS  R  L  KGY I+GNIGDQW+DL+    G R FKLP+P+
Sbjct:  109 KGLALKNDTVNVWIFDLDDTLLSSIPYYAKYGYGTENTAPGAYWSWLESGESTPGLPETLHLYENLLELGIEPIIISDRWKKLSEVTVENLKAVGVTKWKHLILKPNG-SKLTQVVYKSKVRNSLVKKGYNIVGNIGDQWADLVEDTPG-RVFKLPNPL 265          
The following BLAST results are available for this feature:
BLAST of CF834741 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
PPA1_SOLLC3.045e-3846.84Acid phosphatase 1 OS=Solanum lycopersicum GN=APS1... [more]
VSPB_SOYBN4.396e-3754.36Stem 31 kDa glycoprotein OS=Glycine max GN=VSPB PE... [more]
VSPA_SOYBN5.742e-3753.64Stem 28 kDa glycoprotein OS=Glycine max GN=VSPA PE... [more]
S25K_SOYBN9.794e-3754.00Stem 31 kDa glycoprotein (Fragment) OS=Glycine max... [more]
VSP2_ARATH1.567e-2642.77Vegetative storage protein 2 OS=Arabidopsis thalia... [more]
VSP1_ARATH1.733e-2540.88Vegetative storage protein 1 OS=Arabidopsis thalia... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06A18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834741 ID=CF834741; Name=CF834741; organism=Citrus sinensis; type=EST; length=638bp
TTTTTTTTTTTTTATTGAAATTCCTAATTATATTAATTAGCTAATCATTT
AAGATGGATCAGACAGNTTGAAAGTTAAAGCAAATTCGTTGAACAAATGA
AGGCCCTTCGATTATTTATTCAAAATCCCAAGTAAACATTATTTATTAAT
TAGCCAATGCCCTACATTGGGTCAGGCAGCTTGAACGTCCGATTGCCGGC
GTTGGTGCCCAGGAGATCGCTCCATTGATCACCTATGTTTCCAATAATTC
TGTACCCTTTCATCTCAAGCTTCTTTCTTTCACTTGATTTGTACACCACT
GCTGTTTCTCCTGAGTGAGATGATCCCTTGAGGATGAGCTTCTCCCAGGT
GTCGAATCCAGCATGCTTTAAATTAGCTTCTGTAACATTTCTCTGATCTT
CTGGTCTTCCCGTGAGGAATACAATCTTAATTCCAAGCAATAATAATTTT
TTGTAAAGCTTAAGGCTCTCTGGCAGCGGTGGTGCTTTTCCGGTGTTCAC
CCATTCATTAAACAAAGTAGGGTTGTATGGCTTCACCCCGAATCCATTCT
TAGCATAATATGGCAAATTAGATAGCGAGGTTTCATCTATGTCGAAAACC
CAAATGTTCTTGCCGTCGCCAGCAAGCTTGAGGCTCTG
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