CF834750

Overview
NameCF834750
Unique NameCF834750
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1894 contig Csv1_Contig1894:616..1291. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER3_ARATH (Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 SV=1)

HSP 1 Score: 191.815 bits (486), Expect = 2.796e-48
Identity = 92/133 (69.17%), Postives = 113/133 (84.96%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IGVSHC+S ++RLYNFTG G QDPALDSEYAANLK+RKC + NDN T++EMDPGSRKTFDLSYY L+LKRRGLF SD++LTTN  TLS + ++L GS+ +FF+EFAKS+EKMGR  VKTGS G +R++C+  N
Sbjct:  193 IGVSHCSSFTNRLYNFTGRGGQDPALDSEYAANLKSRKCPSLNDNKTIVEMDPGSRKTFDLSYYQLVLKRRGLFQSDSALTTNPTTLSNINRILTGSVGSFFSEFAKSMEKMGRINVKTGSAGVVRRQCSVAN 325          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER39_ARATH (Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=1 SV=1)

HSP 1 Score: 189.119 bits (479), Expect = 1.812e-47
Identity = 93/133 (69.92%), Postives = 110/133 (82.71%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IGVSHC+S S+RL+NFTGVGDQDP+LDSEYA NLK+R+C +  DNTT +EMDPGSR TFDLSYY L+LKRRGLF SDA+LT N   L+ VK+   GS + FFAEF+ S+EKMGR  VKTGS+GEIR+ CAFVN
Sbjct:  194 IGVSHCSSFSNRLFNFTGVGDQDPSLDSEYADNLKSRRCLSIADNTTKVEMDPGSRNTFDLSYYRLVLKRRGLFESDAALTMNPAALAQVKRFAGGSEQEFFAEFSNSMEKMGRIGVKTGSDGEIRRTCAFVN 326          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER30_ARATH (Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=1 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.436e-44
Identity = 86/130 (66.15%), Postives = 108/130 (83.08%), Query Frame = -1
Query:  290 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCA 679
            IGVSHC+S+++RLYNF+    QDP+LDS+YAANLKA KC++ NDN+T+LEMDPGS ++FDLSYY L+LKRRGLF SD++LTTNS TL ++  L+ GS + FF  FAKS+EKMGR KVKTGS G IR RC+
Sbjct:  196 IGVSHCSSMNTRLYNFSTTVKQDPSLDSQYAANLKANKCKSLNDNSTILEMDPGSSRSFDLSYYRLVLKRRGLFQSDSALTTNSATLKVINDLVNGSEKKFFKAFAKSMEKMGRVKVKTGSAGVIRTRCS 325          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER27_ARATH (Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 2.298e-34
Identity = 77/133 (57.89%), Postives = 93/133 (69.92%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG+ HC  +++RLYNFTG GD DP+LDSEYAA L+ +KC+ P D TT LEMDPGS KTFDLSY+ L+ KRRGLF SDA+L  NS T + V Q ++     FF +F  S+ KMGR  V TG  GEIRK C   N
Sbjct:  191 IGMGHCPLLTNRLYNFTGKGDSDPSLDSEYAAKLR-KKCK-PTDTTTALEMDPGSFKTFDLSYFTLVAKRRGLFQSDAALLDNSKTRAYVLQQIRTHGSMFFNDFGVSMVKMGRTGVLTGKAGEIRKTCRSAN 321          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER56_ARATH (Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.809e-32
Identity = 73/133 (54.89%), Postives = 88/133 (66.17%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG  HC  +++RLYNFTG GD DP LD+EYA  L+  KC+ P D TT LEMDPGS KTFD SY+ L+ +RRGLF SDA+L  N  T S V + L      FF +F  S+ KMGR  V TG  GE+RK+C  VN
Sbjct:  199 IGNGHCPQITNRLYNFTGKGDSDPNLDTEYAVKLRG-KCK-PTDTTTALEMDPGSFKTFDESYFKLVSQRRGLFQSDAALLDNQETKSYVLKSLNSDGSTFFKDFGVSMVKMGRIGVLTGQVGEVRKKCRMVN 329          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER1_ORYSJ (Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PRX74 PE=2 SV=2)

HSP 1 Score: 137.887 bits (346), Expect = 4.792e-32
Identity = 75/137 (54.74%), Postives = 94/137 (68.61%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVG---DQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSL-ENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG SHC S + RLYNFTG+    D DP L+ +Y A L++ KC +  DNTTL+EMDPGS KTFDL Y+  + KRRGLF SD  L TN FT + V++   G   + FFA+FA S+ KMG  +V TGS+GEIRK+C  VN
Sbjct:  191 IGTSHCFSFTDRLYNFTGLDNAHDIDPTLELQYMARLRS-KCTSLQDNTTLVEMDPGSFKTFDLGYFKNVAKRRGLFHSDGELLTNGFTRAYVQRHAGGGYKDEFFADFAASMVKMGGVEVLTGSQGEIRKKCNVVN 326          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER1_ARATH (Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 4.344e-25
Identity = 62/135 (45.93%), Postives = 86/135 (63.70%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLV--KQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG+S C  V+SRLYNFTG GD DP+++  Y   LK RKC  P D  T L MDPGS  TFD  Y+ ++ +++GLF SD++L  +  T + V  + +L     +F  +F+ S+ K+G  ++ TG  GEIRKRCAF N
Sbjct:  193 IGISSCALVNSRLYNFTGKGDSDPSMNPSYVRELK-RKC-PPTDFRTSLNMDPGSALTFDTHYFKVVAQKKGLFTSDSTLLDDIETKNYVQTQAILPPVFSSFNKDFSDSMVKLGFVQILTGKNGEIRKRCAFPN 325          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER5_VITVI (Peroxidase 5 OS=Vitis vinifera GN=GSVIVT00037159001 PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 2.467e-20
Identity = 58/134 (43.28%), Postives = 82/134 (61.19%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTL-LEMDPGSRKTFDLSYYNLLLKRRGLFVSDASLTTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG SHC+S S+RLYNF G   QDP LD +YAA+LK  +C   + NT L + M+P S    D+ YY  +L+ RGLF SD +L T++ T + V+Q   G+   +  +FA ++ KMG+  V  G  G+IR  C  +N
Sbjct:  230 IGRSHCSSFSNRLYNFNGTSGQDPTLDPQYAASLKT-QCPQGSTNTNLVVPMNPSSPSITDVGYYVDVLRNRGLFTSDQTLLTDTTTATQVRQ-NAGNPFLWKNKFASAMVKMGQLGVLIGEAGQIRANCRVIN 361          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER15_ARATH (Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.076e-19
Identity = 58/134 (43.28%), Postives = 75/134 (55.97%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL-TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG S CTS   RLYN +G G  D  L+  YAANL+ R C     +  L E+D  S   FD SY+  L++  GL  SD  L ++N  +  LVK+  +   E FF +FA+S+ KMG     TGS GEIRK C  +N
Sbjct:  205 IGFSRCTSFRQRLYNQSGNGSPDRTLEQSYAANLRQR-CPRSGGDQNLSELDINSAGRFDNSYFKNLIENMGLLNSDEVLFSSNEQSRELVKKYAEDQ-EEFFEQFAESMIKMGNISPLTGSSGEIRKNCRKIN 336          
BLAST of CF834750 vs. ExPASy Swiss-Prot
Match: PER14_ARATH (Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.354e-18
Identity = 58/134 (43.28%), Postives = 77/134 (57.46%), Query Frame = -1
Query:  281 IGVSHCTSVSSRLYNFTGVGDQDPALDSEYAANLKARKCRTPNDNTTLLEMDPGSRKTFDLSYYNLLLKRRGLFVSDASL-TTNSFTLSLVKQLLQGSLENFFAEFAKSVEKMGRNKVKTGSEGEIRKRCAFVN 679
            IG S CTS   RLYN +G G  D  L+  YAA L+ R  R+  D   L E+D  S   FD SY+  L++  GL  SD  L ++N  +  LVK+  +   E FF +FA+S+ KMG+    TGS GEIRK+C  +N
Sbjct:  204 IGFSRCTSFRQRLYNQSGSGSPDTTLEKSYAAILRQRCPRSGGDQN-LSELDINSAGRFDNSYFKNLIENMGLLNSDQVLFSSNEQSRELVKKYAEDQ-EEFFEQFAESMIKMGKISPLTGSSGEIRKKCRKIN 335          
The following BLAST results are available for this feature:
BLAST of CF834750 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PER3_ARATH2.796e-4869.17Peroxidase 3 OS=Arabidopsis thaliana GN=PER3 PE=1 ... [more]
PER39_ARATH1.812e-4769.92Peroxidase 39 OS=Arabidopsis thaliana GN=PER39 PE=... [more]
PER30_ARATH1.436e-4466.15Peroxidase 30 OS=Arabidopsis thaliana GN=PER30 PE=... [more]
PER27_ARATH2.298e-3457.89Peroxidase 27 OS=Arabidopsis thaliana GN=PER27 PE=... [more]
PER56_ARATH2.809e-3254.89Peroxidase 56 OS=Arabidopsis thaliana GN=PER56 PE=... [more]
PER1_ORYSJ4.792e-3254.74Peroxidase 1 OS=Oryza sativa subsp. japonica GN=PR... [more]
PER1_ARATH4.344e-2545.93Peroxidase 1/2 OS=Arabidopsis thaliana GN=PER1 PE=... [more]
PER5_VITVI2.467e-2043.28Peroxidase 5 OS=Vitis vinifera GN=GSVIVT0003715900... [more]
PER15_ARATH6.076e-1943.28Peroxidase 15 OS=Arabidopsis thaliana GN=PER15 PE=... [more]
PER14_ARATH1.354e-1843.28Peroxidase 14 OS=Arabidopsis thaliana GN=PER14 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06A23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06A23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834750 ID=CF834750; Name=CF834750; organism=Citrus sinensis; type=EST; length=679bp
TTTTTTTTTTTTTTGTCTCAATTTCAATTGCTTTTATTACAAGACCCCTA
ATCTTCTTGAAAAAGTAAAAGAGATACGGTGGGGCTCCATTATTCGAACA
GTATGCAAAGAAGCCCAAATCTCGCCGTTCGGCTAGGAGATCATTGACCT
TCTCACAGTAAAAGCAAAACTTGGTCATTCATTTTTGTTCGTCGGCCCAA
ATAAGAAAATAAAATCAAGGAGAAAAAGAAAATGGAATGAAAAAGTAGAA
AAAAGACCGAAATGCCTCCAAGCTTAGCTAATTGACAAAAGCGCAACGCT
TCCTGATCTCACCTTCTGATCCAGTCTTAACCTTATTCCTTCCCATTTTC
TCCACAGACTTGGCAAATTCAGCAAAGAAATTTTCCAATGATCCCTGAAG
AAGTTGCTTAACCAAAGACAAAGTGAAAGAGTTTGTAGTCAAAGAAGCAT
CAGATACAAAGAGACCCCTTCTCTTAAGCAAAAGATTGTAGTAGCTAAGA
TCAAATGTCTTGCGGCTACCAGGGTCCATTTCAAGTAATGTAGTGTTATC
ATTTGGAGTTCTGCACTTTCTTGCCTTGAGATTTGCTGCATATTCACTGT
CAAGAGCAGGGTCTTGGTCACCCACTCCTGTGAAATTGTACAGCCGGCTT
GAAACTGAAGTGCAGTGGGAGACCCCGAT
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