CF834778

Overview
NameCF834778
Unique NameCF834778
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length607
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig516 contig Csv1_Contig516:208..814. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2C_ARATH (Hydroxyacylglutathione hydrolase cytoplasmic OS=Arabidopsis thaliana GN=GLX2-2 PE=1 SV=2)

HSP 1 Score: 287.345 bits (734), Expect = 3.928e-77
Identity = 134/193 (69.43%), Postives = 154/193 (79.79%), Query Frame = 3
Query:   12 MKEMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWRG 590
            +K++VP IKVYGG LD VKGCT  V+NGDK ++G  +N+L+LHTPCHTKG ISYYV GKEGE+PAVFTGDTLFVAGCGKFFEG+AEQMYQSLCVTL +LP+PTQVYCGHEYTVKNL FALTVE  N                 LPTIPST+EEELETNPFMRVD PE+QE +G   PI+ +RE+R +KD WRG
Sbjct:   66 IKQLVPDIKVYGGSLDKVKGCTDAVDNGDKLTLGQDINILALHTPCHTKGHISYYVNGKEGENPAVFTGDTLFVAGCGKFFEGTAEQMYQSLCVTLAALPKPTQVYCGHEYTVKNLEFALTVEPNNGKIQQKLAWARQQRQADLPTIPSTLEEELETNPFMRVDKPEIQEKLGCKSPIDTMREVRNKKDQWRG 258          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_DANRE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Danio rerio GN=hagh PE=2 SV=2)

HSP 1 Score: 186.808 bits (473), Expect = 7.224e-47
Identity = 99/191 (51.83%), Postives = 123/191 (64.40%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            +++PG+ VYGG  D V   T +V + + F +G+ +NV  L TPCHT G I Y+VT +   E PAVFTGDTLFVAGCGKFFEG+A++MY++L   LG LP  T+VYCGHEYT+ NL FA  VE  N                G PTIPST+ EE   NPFMRV    + E  G +DPIEA+R IRK KD +R
Sbjct:  111 KLMPGLTVYGGD-DRVGALTQKVTHYNTFKVGS-LNVKCLFTPCHTSGHICYFVTKENSTEAPAVFTGDTLFVAGCGKFFEGTADEMYKALIEVLGRLPPETRVYCGHEYTINNLKFARHVEPNNEVIRTKLAWAKEKYDNGEPTIPSTVAEEFTFNPFMRVREKSVLEHAGTSDPIEAMRSIRKEKDGFR 299          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_MOUSE (Hydroxyacylglutathione hydrolase, mitochondrial OS=Mus musculus GN=Hagh PE=2 SV=2)

HSP 1 Score: 177.563 bits (449), Expect = 4.383e-44
Identity = 91/191 (47.64%), Postives = 120/191 (62.83%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDP-AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT G I Y+V+     +P AVFTGDTLFVAGCGKF+EG+A++MY++L   LG LP  T+VYCGHEYTV NL FA  VE GN                G PT+PST+ EE   NPFMRV    +Q+  G  DP+  +R IR+ KD ++
Sbjct:  117 KLEPGLKVYGGD-DRIGALTHKVTHLSTLQVGS-LSVKCLSTPCHTSGHICYFVSKPGSSEPSAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPPDTKVYCGHEYTVNNLKFARHVEPGNAAIQEKLAWAKEKYAIGEPTVPSTLAEEFTYNPFMRVKEKTVQQHAGETDPVTTMRAIRREKDQFK 305          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_BOVIN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Bos taurus GN=HAGH PE=2 SV=3)

HSP 1 Score: 177.563 bits (449), Expect = 4.383e-44
Identity = 92/191 (48.17%), Postives = 119/191 (62.30%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT G I Y+VT     E PAVFTGDTLFVAGCGKF+EG+A++MY++L   LG LP  T+VYCGHEYT+ NL FA  VE  N                G PT+PSTI EE   NPFMRV    +Q+  G  +P+  +R IRK KD ++
Sbjct:  116 KLEPGLKVYGGD-DRIGALTHKVTHLSTLQVGS-LHVKCLSTPCHTSGHICYFVTKPNSPEPPAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPADTRVYCGHEYTINNLKFARHVEPDNTAVREKLAWAKEKYSIGEPTVPSTIAEEFTYNPFMRVREKTVQQHAGETEPVATMRAIRKEKDQFK 304          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_CHICK (Hydroxyacylglutathione hydrolase, mitochondrial OS=Gallus gallus GN=HAGH PE=2 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 5.724e-44
Identity = 98/187 (52.41%), Postives = 114/187 (60.96%), Query Frame = 3
Query:   30 GIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTG-KEGEDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            G++VYGG    V   T +V +     +G+ +NV  L TPCHT G I YYVT     E PAVFTGDTLFVAGCGKFFEG+ E+MY++L   LGSL   T+VYCGHEYT+ NL FA  VE  NV               G PTIPSTI EE   NPFMRV    +QE  G  DPI  +  IRK KDN+R
Sbjct:  122 GLRVYGGD-SRVGALTQKVSHLTSLKVGS-LNVKCLCTPCHTSGHICYYVTKPNSSEPPAVFTGDTLFVAGCGKFFEGTPEEMYRALIEILGSLDPETRVYCGHEYTINNLKFARHVEPNNVSIQEKLAWAKAKYDSGEPTIPSTIAEEFTYNPFMRVREKTVQEHAGETDPIRTMGAIRKEKDNFR 306          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_XENTR (Hydroxyacylglutathione hydrolase, mitochondrial OS=Xenopus tropicalis GN=hagh PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 9.764e-44
Identity = 96/191 (50.26%), Postives = 117/191 (61.26%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            +MV G+KVYGG    +   T +V +   F +G+ ++V  L+TPCHT G I YYVT     E PAVFTGDTLFVAGCGKFFEG+ E+MY +L   LG LP  T+VYCGHEYT+ NL FA  VE  N                G PTIPST+ EE   NPFMRV    +QE  G  DPI  +  IRK KD+++
Sbjct:  121 KMVSGLKVYGGD-SRIGALTQKVSHLTTFQVGS-LHVKCLYTPCHTSGHICYYVTKPNSTEPPAVFTGDTLFVAGCGKFFEGTPEEMYAALIEVLGRLPPETRVYCGHEYTINNLKFARHVEPCNDAIKQKLAWAKETYNSGEPTIPSTLAEEFTFNPFMRVREKSVQEHAGERDPISTMGAIRKEKDHFK 309          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_CALJA (Hydroxyacylglutathione hydrolase, mitochondrial (Fragment) OS=Callithrix jacchus GN=HAGH PE=2 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 2.175e-43
Identity = 89/191 (46.60%), Postives = 119/191 (62.30%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            ++ PG+KVYGG  D + G TH+  +     +G+ +NV  L TPCHT G I Y+VT   G + PAVFTGDTLFVAGCGKF+EG+A++M ++L   LG  P  T+VYCGHEYT+ NL FA  VE+GN                G P +PST+ EE   NPFMRV    +Q+  G  DP+  +R +R+ KD ++
Sbjct:   88 KLEPGLKVYGGD-DRIGGLTHKGTHLSTLQVGS-LNVKCLSTPCHTSGHICYFVTKPGGSQPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRFPPDTRVYCGHEYTINNLKFARHVESGNAAVQEKLAWAKEKYSIGEPAVPSTLAEEFTYNPFMRVREKTVQQHAGETDPVPTMRAVRREKDQFK 276          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_RAT (Hydroxyacylglutathione hydrolase, mitochondrial OS=Rattus norvegicus GN=Hagh PE=1 SV=2)

HSP 1 Score: 174.481 bits (441), Expect = 3.710e-43
Identity = 90/191 (47.12%), Postives = 119/191 (62.30%), Query Frame = 3
Query:   18 EMVPGIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEGEDP-AVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            ++ PG+KVYGG  D +   TH+V +     +G+ ++V  L TPCHT G I Y+V+     +P AVFTGDTLFVAGCGKF+EG+A++MY++L   LG LP  T+V CGHEYTV NL FA  VE GN                G PT+PST+ EE   NPFMRV    +Q+  G  DP+  +R IR+ KD ++
Sbjct:  117 KLEPGLKVYGGD-DRIGALTHKVTHLSTLEVGS-LSVKCLSTPCHTSGHICYFVSKPGSSEPSAVFTGDTLFVAGCGKFYEGTADEMYKALLEVLGRLPPDTKVICGHEYTVNNLKFARHVEPGNTAVQEKLAWAKEKNAIGEPTVPSTLAEEFTYNPFMRVKEKTVQQHAGETDPVTTMRAIRREKDQFK 305          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_HUMAN (Hydroxyacylglutathione hydrolase, mitochondrial OS=Homo sapiens GN=HAGH PE=1 SV=2)

HSP 1 Score: 174.096 bits (440), Expect = 4.846e-43
Identity = 89/187 (47.59%), Postives = 117/187 (62.57%), Query Frame = 3
Query:   30 GIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            G+KVYGG  D +   TH++ +     +G+ +NV  L TPCHT G I Y+V+   G E PAVFTGDTLFVAGCGKF+EG+A++M ++L   LG LP  T+VYCGHEYT+ NL FA  VE GN                G PT+PST+ EE   NPFMRV    +Q+  G  DP+  +R +R+ KD ++
Sbjct:  120 GLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHTSGHICYFVSKPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIREKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHAGETDPVTTMRAVRREKDQFK 304          
BLAST of CF834778 vs. ExPASy Swiss-Prot
Match: GLO2_MACFA (Hydroxyacylglutathione hydrolase, mitochondrial OS=Macaca fascicularis GN=HAGH PE=2 SV=2)

HSP 1 Score: 172.17 bits (435), Expect = 1.841e-42
Identity = 89/187 (47.59%), Postives = 116/187 (62.03%), Query Frame = 3
Query:   30 GIKVYGGPLDNVKGCTHQVENGDKFSIGAHVNVLSLHTPCHTKGRISYYVTGKEG-EDPAVFTGDTLFVAGCGKFFEGSAEQMYQSLCVTLGSLPQPTQVYCGHEYTVKNLLFALTVEAGNVXXXXXXXXXXXXXXXGLPTIPSTIEEELETNPFMRVDLPELQELVGFNDPIEALREIRKRKDNWR 587
            G+KVYGG  D +   TH++ +     +G+ +NV  L TPCHT G I Y+V+   G E PAVFTGDTLFVAGCGKF+EG+A++M ++L   LG LP  T+VYCGHEYT+ NL FA  VE GN                G PT+PST+ EE   NPFMRV    +Q+     DP+  +R +RK KD ++
Sbjct:  120 GLKVYGGD-DRIGALTHKITHLSTLQVGS-LNVKCLATPCHTSGHICYFVSRPGGSEPPAVFTGDTLFVAGCGKFYEGTADEMCKALLEVLGRLPPDTRVYCGHEYTINNLKFARHVEPGNAAIQEKLAWAKEKYSIGEPTVPSTLAEEFTYNPFMRVREKTVQQHARETDPVTTMRAVRKEKDEFK 304          
The following BLAST results are available for this feature:
BLAST of CF834778 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 275
Match NameE-valueIdentityDescription
GLO2C_ARATH3.928e-7769.43Hydroxyacylglutathione hydrolase cytoplasmic OS=Ar... [more]
GLO2_DANRE7.224e-4751.83Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MOUSE4.383e-4447.64Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_BOVIN4.383e-4448.17Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CHICK5.724e-4452.41Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_XENTR9.764e-4450.26Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_CALJA2.175e-4346.60Hydroxyacylglutathione hydrolase, mitochondrial (F... [more]
GLO2_RAT3.710e-4347.12Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_HUMAN4.846e-4347.59Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]
GLO2_MACFA1.841e-4247.59Hydroxyacylglutathione hydrolase, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06B17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06B17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834778 ID=CF834778; Name=CF834778; organism=Citrus sinensis; type=EST; length=607bp
GGGAACGAACGATGAAGGAGATGGTGCCTGGGATTAAGGTGTATGGTGGC
CCACTTGATAATGTAAAGGGGTGCACTCATCAAGTGGAAAATGGTGATAA
GTTCTCAATTGGAGCTCATGTCAATGTACTGTCTCTTCACACACCTTGCC
ATACCAAAGGTCGCATAAGTTATTATGTGACTGGAAAAGAGGGAGAAGAC
CCAGCTGTTTTCACTGGAGACACACTGTTTGTTGCTGGTTGTGGAAAATT
TTTTGAAGGCTCGGCAGAACAGATGTATCAATCCCTGTGCGTGACATTGG
GCTCATTACCTCAGCCAACTCAAGTTTACTGTGGCCATGAGTACACAGTG
AAGAACCTACTATTTGCTCTTACTGTCGAAGCAGGCAATGTGAAGCTACA
GCAAAAATTGGCGTGGGCTCAGAACCAGCAGCAAGCTGGCTTGCCAACCA
TTCCCTCAACCATTGAGGAAGAGTTGGAGACGAACCCCTTCATGCGTGTT
GATCTACCAGAGCTTCAGGAGTTGGTTGGTTTCAATGATCCCATTGAAGC
TCTCCGGGAGATAAGGAAGCGAAAGGACAATTGGAGAGGCTGATTAAGGA
CCTGCAT
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