CF834813
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834813 vs. ExPASy Swiss-Prot
Match: GI1L3_ARATH (Probable gibberellin receptor GID1L3 OS=Arabidopsis thaliana GN=GID1L3 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.046e-18 Identity = 58/185 (31.35%), Postives = 86/185 (46.49%), Query Frame = 2 Query: 155 KIPPSDDPTTGVRSKDVVISPEPPVSARIFIPYEA---------QNPNQNKL-PLLFYLRGGGFCRQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEHSWAALNWVASHVTGNGPEPWLNDHADFG-KVLIGGASAGGNIAHTLAFRVGSIGLPCV*LAGVIMVHPFFGGTSPEE 676 K+P + +P GV S DV+I + + +R++ P +A QNP ++ P++ + GG F SA Y C A+VVSV Y P+ P Y+ WA L WV S WL D ++ + G S+GGNI H +A R + + G I+++P FGGT E Sbjct: 52 KVPANANPVNGVFSFDVIIDRQTNLLSRVYRPADAGTSPSITDLQNPVDGEIVPVIVFFHGGSFAHSSANSAIYDTLCRRLVGLCGAVVVSVNYRRAPENRYPCAYDDGWAVLKWVNS-------SSWLRSKKDSKVRIFLAGDSSGGNIVHNVAVRAVESRID---VLGNILLNPMFGGTERTE 226
BLAST of CF834813 vs. ExPASy Swiss-Prot
Match: GI1L1_ARATH (Probable gibberellin receptor GID1L1 OS=Arabidopsis thaliana GN=GID1L1 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.973e-18 Identity = 57/187 (30.48%), Postives = 81/187 (43.32%), Query Frame = 2 Query: 155 KIPPSDDPTTGVRSKDVVISPEPPVSARIFIPYEAQNPNQNKL------------PLLFYLRGGGFCRQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEHSWAALNWVASHVTGNGPEPWLNDHADFG-KVLIGGASAGGNIAHTLAFRVGSIGLPCV*LAGVIMVHPFFGGTSPEE 676 K+ + +P GV S DV+I + +R++ P A + P++ + GG F SA Y C +VVSV Y P+ P P Y+ W ALNWV S WL D + + G S+GGNIAH +A R G G+ + G I+++P FGG E Sbjct: 52 KVTANANPVDGVFSFDVLIDRRINLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLCKCVVVSVNYRRAPENPYPCAYDDGWIALNWVNS-------RSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGESGID---VLGNILLNPMFGGNERTE 228
BLAST of CF834813 vs. ExPASy Swiss-Prot
Match: GI1L2_ARATH (Probable gibberellin receptor GID1L2 OS=Arabidopsis thaliana GN=GID1L2 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.180e-16 Identity = 61/183 (33.33%), Postives = 83/183 (45.36%), Query Frame = 2 Query: 155 KIPPSDDPTTGVRSKDVVISPEPPVSARIFIPYEAQNPNQNK-------------LPLLFYLRGGGFCRQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEHSWAALNWVASHVTGNGPEPWLNDHADFG-KVLIGGASAGGNIAHTLAFRVGSIGLPCV*LAGVIMVHPFFGG 661 K+P + P GV S D V S ++ RI+ P + ++ +P+L + GG F SA Y FC +VVSV+Y P+ P Y+ W ALNWV S V WL D V + G S+GGNIAH +A R + G V + G I++HP FGG Sbjct: 52 KVPANSFPLDGVFSFDHVDSTTNLLT-RIYQPASLLHQTRHGTLELTKPLSTTEIVPVLIFFHGGSFTHSSANSAIYDTFCRRLVTICGVVVVSVDYRRSPEHRYPCAYDDGWNALNWVKSRV-------WLQSGKDSNVYVYLAGDSSGGNIAHNVAVRATNEG---VKVLGNILLHPMFGG 223
BLAST of CF834813 vs. ExPASy Swiss-Prot
Match: GID1_ORYSJ (Gibberellin receptor GID1 OS=Oryza sativa subsp. japonica GN=GID1 PE=1 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 8.284e-16 Identity = 55/194 (28.35%), Postives = 82/194 (42.27%), Query Frame = 2 Query: 155 KIPPSDDPTTGVRSKDVVISPEPPVSARIF-------------------IPYEAQNPNQNKLPLLFYLRGGGFCRQSAFGPRYHNFCSVFSAQANAIVVSVEYGNFPDRPIPACYEHSWAALNWVASHVTGNGPEPWLNDHADF-GKVLIGGASAGGNIAHTLAFRVGSIGLPCV*LAGVIMVHPFFGGTSPEE 676 ++P + P GV S D +I + RI+ + + P P++ + GG F SA Y + C F + +VVSV Y P+ P Y+ W AL WV S +P++ D +V + G S+GGNIAH +A R G V + G I+++ FGGT E Sbjct: 52 RVPANARPLEGVSSFDHIIDQSVGLEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSLCRRFVKLSKGVVVSVNYRRAPEHRYPCAYDDGWTALKWVMS-------QPFMRSGGDAQARVFLSGDSSGGNIAHHVAVRAADEG---VKVCGNILLNAMFGGTERTE 235 The following BLAST results are available for this feature:
BLAST of CF834813 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF834813 ID=CF834813; Name=CF834813; organism=Citrus sinensis; type=EST; length=684bpback to top |