CF834822

Overview
NameCF834822
Unique NameCF834822
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length318
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6120 contig Csv1_Contig6120:1296..1613. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C98A3_ARATH (Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CYP98A3 PE=1 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.869e-30
Identity = 59/88 (67.05%), Postives = 67/88 (76.14%), Query Frame = -2
Query:   54 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAP 317
            VKI GY++ KGS VHVNVWA+ RDPA WKN           ED+DMKGHD+ LLPFG+GRR+CPG QLGINLVTSM+ HLLHHF W P
Sbjct:  376 VKIGGYDIPKGSNVHVNVWAVARDPAVWKNPFEFRPERFLEEDVDMKGHDFRLLPFGAGRRVCPGAQLGINLVTSMMSHLLHHFVWTP 463          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C98A2_SOYBN (Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 4.164e-30
Identity = 58/88 (65.91%), Postives = 66/88 (75.00%), Query Frame = -2
Query:   54 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWAP 317
            VK+ GY++ KGS VHVNVWA+ RDPA WK+           ED+DMKGHD+ LLPFGSGRR+CPG QLGINL  SMLGHLLHHF W P
Sbjct:  377 VKVGGYDIPKGSNVHVNVWAVARDPAVWKDPLEFRPERFLEEDVDMKGHDFRLLPFGSGRRVCPGAQLGINLAASMLGHLLHHFCWTP 464          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C98A1_SORBI (Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 6.880e-25
Identity = 51/87 (58.62%), Postives = 63/87 (72.41%), Query Frame = -2
Query:   57 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWWA 317
            VKI GY++ KG+ V VNVWA+ RDP  W N           E+ID+KG D+ +LPFG+GRR+CPG QLGINLV SM+GHLLHHF W+
Sbjct:  379 VKIGGYDIPKGANVMVNVWAVARDPKVWSNPLEYRPERFLEENIDIKGSDFRVLPFGAGRRVCPGAQLGINLVASMIGHLLHHFEWS 465          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71BA_ARATH (Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=CYP71B10 PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.028e-20
Identity = 46/85 (54.12%), Postives = 56/85 (65.88%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            KI+GY +Q  + +HVNVWAIGRDP  WK+            DID+KG DY LLPFGSGRRICP + +GI  V   L +LL+HF W
Sbjct:  382 KINGYTIQPKTRLHVNVWAIGRDPEIWKDPEEFLPERFMDCDIDVKGQDYELLPFGSGRRICPAVYMGITTVEFGLANLLYHFDW 466          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 9.623e-19
Identity = 41/86 (47.67%), Postives = 56/86 (65.12%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            V++SGY +  G++V VN WAIGRDP  W +             +D++GHD+ L+PFG+GRRICPGI L   +V  MLG LL++F W
Sbjct:  370 VELSGYTIPAGTLVFVNAWAIGRDPTVWDDSLEFKPQRFLESRLDVRGHDFDLIPFGAGRRICPGIPLATRMVPIMLGSLLNNFDW 455          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 3.657e-18
Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            V++ G+ V K + V VNVWAIGRDP+ W+N           +DID+KG DY L PFG GRRICPG+ L +  V+ ML  LL+ F W
Sbjct:  388 VEVLGFMVPKDTQVLVNVWAIGRDPSVWENPSQFEPERFMGKDIDVKGRDYELTPFGGGRRICPGLPLAVKTVSLMLASLLYSFDW 473          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71BO_ARATH (Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=CYP71B24 PE=2 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 8.146e-18
Identity = 42/86 (48.84%), Postives = 53/86 (61.63%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            +KI GYN+   +++ VNVW+IGRDP  WKN             ID KG+ + +LPFGSGRRICPGI   I  V   L +LL+HF W
Sbjct:  380 IKIQGYNIPSKTILLVNVWSIGRDPKHWKNPEEFNPERFIDCPIDYKGNSFEMLPFGSGRRICPGIAFAIATVELGLLNLLYHFDW 465          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 1.064e-17
Identity = 42/86 (48.84%), Postives = 54/86 (62.79%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            V++ G+ V K + V VNVWAIGRDP  W+N           +DID++G DY L PFG+GRRICPG+ L +  V  ML  LL+ F W
Sbjct:  389 VEVLGFMVPKDTQVFVNVWAIGRDPNVWENSSRFKPERFLGKDIDLRGRDYELTPFGAGRRICPGLPLAVKTVPLMLASLLYSFDW 474          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71B9_ARATH (Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CYP71B9 PE=2 SV=3)

HSP 1 Score: 87.8113 bits (216), Expect = 1.815e-17
Identity = 39/85 (45.88%), Postives = 56/85 (65.88%), Query Frame = -2
Query:   60 KISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 314
            +I+GY +Q  ++++VNVWAIGRDP  WK+            +ID KG ++ LLPFGSGRRICPG+ +G  +V   L ++L+ F W
Sbjct:  379 EINGYKIQPKTLLYVNVWAIGRDPDSWKDADMFYPERFMDNNIDAKGQNFELLPFGSGRRICPGMYMGTTMVEFGLANMLYQFDW 463          
BLAST of CF834822 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 2.370e-17
Identity = 43/86 (50.00%), Postives = 55/86 (63.95%), Query Frame = -2
Query:   60 VKISGYNVQKGSVVHVNVWAIGRDPADWKNXXXXXXXXXXXEDIDMKGHDY*LLPFGSGRRICPGIQLGINLVTSMLGHLLHHFWW 317
            VKI GYN+ K + +HVN+WAI R+P  WK+             ID KG ++ LLPFGSGRRICPGI +G+ LV   L +LL+ F W
Sbjct:  374 VKIGGYNIPKKTWIHVNIWAIHRNPNVWKDPEAFIPERFMDSQIDYKGLNFELLPFGSGRRICPGIGMGMALVHLTLINLLYRFDW 459          
The following BLAST results are available for this feature:
BLAST of CF834822 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
C98A3_ARATH1.869e-3067.05Cytochrome P450 98A3 OS=Arabidopsis thaliana GN=CY... [more]
C98A2_SOYBN4.164e-3065.91Cytochrome P450 98A2 OS=Glycine max GN=CYP98A2 PE=... [more]
C98A1_SORBI6.880e-2558.62Cytochrome P450 98A1 OS=Sorghum bicolor GN=CYP98A1... [more]
C71BA_ARATH1.028e-2054.12Cytochrome P450 71B10 OS=Arabidopsis thaliana GN=C... [more]
C76B1_HELTU9.623e-1947.677-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C4_ARATH3.657e-1850.00Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C71BO_ARATH8.146e-1848.84Cytochrome P450 71B24 OS=Arabidopsis thaliana GN=C... [more]
C76C2_ARATH1.064e-1748.84Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C71B9_ARATH1.815e-1745.88Cytochrome P450 71B9 OS=Arabidopsis thaliana GN=CY... [more]
C71BC_ARATH2.370e-1750.00Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06C23_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834822 ID=CF834822; Name=CF834822; organism=Citrus sinensis; type=EST; length=318bp
CACACGAGTTCCCGGAGCATATCAATATTCCTCAGGCTTCACTTCCTTTA
CCTCGGTGCCCACCAAAAATGGTGCAAAAGATGACCCAACATCGAGGTCA
CTAAATTTATGCCAAGTTGTATGCCGGGACAAATTCTTCTCCCCGAACCA
AATGGTAACAATCAATAATCGTGTCCTTTCATGTCAATGTCCTCCTCTAA
TAACCTCTCAGGCCTAAATTCCAACGGGTTTTTCCAATCAGCAGGGTCTC
TGCCTATGGCCCAAACGTTTACATGTACCACTGATCCTTTCTGAACGTTG
TAGCCGCTGATTTTTACA
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