CF834842

Overview
NameCF834842
Unique NameCF834842
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length715
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7607 contig Csv1_Contig7607:108..822. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KIN10_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana GN=KIN10 PE=1 SV=2)

HSP 1 Score: 422.165 bits (1084), Expect = 1.390e-117
Identity = 199/233 (85.41%), Postives = 213/233 (91.42%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLLDNRFRVSSGYLGAEFQETMESGFNRLHPIEPAVSPVAHRAPGFMDYQGMGLRGQLPYERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCRW 715
            VWSCGVILYAL CGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRML+VDPMKR+TIPEIRQHPWFQAHLPRYLAVPPPDT+QQAKKIDEEIL+EV+ MGFD+N L+ESLRNR QN+ TV YYL+LDNRFR SSGYLGAEFQETME G  R+HP E   SPV+HR PG M+YQG+GLR Q P ERKWALGLQSRAHPREIMTEVLKALQ+LNV WKKIGHYNMKCRW
Sbjct:  223 VWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRVTIPEIRQHPWFQAHLPRYLAVPPPDTVQQAKKIDEEILQEVINMGFDRNHLIESLRNRTQNDGTVTYYLILDNRFRASSGYLGAEFQETME-GTPRMHPAESVASPVSHRLPGLMEYQGVGLRSQYPVERKWALGLQSRAHPREIMTEVLKALQDLNVCWKKIGHYNMKCRW 454          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: KIN11_ARATH (SNF1-related protein kinase catalytic subunit alpha KIN11 OS=Arabidopsis thaliana GN=KIN11 PE=1 SV=1)

HSP 1 Score: 382.104 bits (980), Expect = 1.594e-105
Identity = 183/233 (78.54%), Postives = 201/233 (86.27%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLLDNRFRVSSGYLGAEFQETMESGFNRLHPIEPAVSPVAHRAPGFMDYQGMGLRGQLPYERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCRW 715
            VWSCGVILYAL CGTLPFDDENIPNLFKKIKGGIYTLPSHLS  ARDLIPRMLIVDP+KRITIPEIRQH WFQ HLPRYLAV PPDT++QAKKI+EEI++EVV MGFD+NQ++ESLRNR QN+ATV YYLLLDNRFRV SGYL +EFQET +SG N +   E   SPV H  P  +D+ G+G R Q+P +RKWALGLQS AHPREIM EVLKALQELNV WKKIGHYNMKCRW
Sbjct:  201 VWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSEARDLIPRMLIVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDRNQVLESLRNRTQNDATVTYYLLLDNRFRVPSGYLESEFQETTDSGSNPMRTPEAGASPVGHWIPAHVDHYGLGARSQVPVDRKWALGLQSHAHPREIMNEVLKALQELNVCWKKIGHYNMKCRW 433          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: RKIN1_SECCE (Carbon catabolite-derepressing protein kinase OS=Secale cereale GN=RKIN1 PE=2 SV=1)

HSP 1 Score: 305.449 bits (781), Expect = 1.896e-82
Identity = 161/235 (68.51%), Postives = 177/235 (75.32%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVVKMGFDQNQLVESLRNRLQNEATVAYYLLLDNRFRVSSGYLGAEFQETMESGFNRLHPIEPAVSPVAHRAPGFMDYQGMGLRGQLPYERKWALGL-QSRAHPREIMTEVLKALQELNVGWKKIGH-YNMKCRW 715
            VWSCGVILYAL CG +PFDD+NIPNLFKKIKGG Y LP +LS   RDLI RMLIVDPMKRITI EIR+H WFQ  LPRYLAVPPPD MQQAK IDE+ L++VVK+G+D++ + ESL NRLQNE TVAYYLLLDNRFR +SGYLGA +Q+ MES          A        PG  D QG GLR     ERKWALGL QSRA PR IM EVLKAL+ELNV WKK G  YNMKCRW
Sbjct:  198 VWSCGVILYALLCGAVPFDDDNIPNLFKKIKGGTYILPIYLSDLVRDLISRMLIVDPMKRITIGEIRKHSWFQNRLPRYLAVPPPDMMQQAKMIDEDTLRDVVKLGYDKDHVCESLCNRLQNEETVAYYLLLDNRFRATSGYLGAHYQQPMES----------ASPSTRSYLPGSNDSQGSGLRPYYRVERKWALGLQQSRAPPRAIMIEVLKALKELNVCWKKNGDCYNMKCRW 422          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: AAPK2_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Pongo abelii GN=PRKAA2 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 3.386e-39
Identity = 95/248 (38.31%), Postives = 143/248 (57.66%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVV-KMGFDQNQLVESL-RNRLQNEATVAYYLLLDNR---FRVSSGYLGAEFQETMESGFNRLHPIEPAVSPVAHRAPGF----------MDYQGMGLRGQLPYER-KWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCR 712
            +WSCGVILYAL CGTLPFDDE++P LFKKI+GG++ +P +L+     L+  ML VDP+KR TI +IR+H WF+  LP YL   P D    A  ID+E +KEV  K    +++++ SL     Q++  VAY+L++DNR    + S  YL +          + +H I P + P   R P            +D         L  ++ KW LG++S++ P +IM EV +A+++L+  WK +  Y+++ R
Sbjct:  197 IWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLF--PEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAVAYHLIIDNRRIMNQASEFYLASSPPSGSFMDDSAMH-IPPGLKPHPERMPPLIADSPKARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVVNAYHLRVR 441          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: AAPK2_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Homo sapiens GN=PRKAA2 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 3.386e-39
Identity = 95/248 (38.31%), Postives = 143/248 (57.66%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVV-KMGFDQNQLVESL-RNRLQNEATVAYYLLLDNR---FRVSSGYLGAEFQETMESGFNRLHPIEPAVSPVAHRAPGF----------MDYQGMGLRGQLPYER-KWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCR 712
            +WSCGVILYAL CGTLPFDDE++P LFKKI+GG++ +P +L+     L+  ML VDP+KR TI +IR+H WF+  LP YL   P D    A  ID+E +KEV  K    +++++ SL     Q++  VAY+L++DNR    + S  YL +          + +H I P + P   R P            +D         L  ++ KW LG++S++ P +IM EV +A+++L+  WK +  Y+++ R
Sbjct:  197 IWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLF--PEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAVAYHLIIDNRRIMNQASEFYLASSPPSGSFMDDSAMH-IPPGLKPHPERMPPLIADSPKARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVVNAYHLRVR 441          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: AAPK2_PIG (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Sus scrofa GN=PRKAA2 PE=2 SV=2)

HSP 1 Score: 160.999 bits (406), Expect = 5.776e-39
Identity = 95/248 (38.31%), Postives = 143/248 (57.66%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVV-KMGFDQNQLVESL-RNRLQNEATVAYYLLLDNR---FRVSSGYLGAEFQETMESGFNRLHPIEPAVSPVAHRAPGF----------MDYQGMGLRGQLPYER-KWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCR 712
            +WSCGVILYAL CGTLPFDDE++P LFKKI+GG++ +P +L+     L+  ML VDP+KR TI +IR+H WF+  LP YL   P D    A  ID+E +KEV  K    +++++ SL     Q++  VAY+L++DNR    + S  YL +          + +H I P + P   R P            +D         L  ++ KW LG++S++ P +IM EV +A+++L+  WK +  Y+++ R
Sbjct:  197 IWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLF--PEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAVAYHLVIDNRRIMNQASEFYLASSPPTGSFMDDSAMH-IPPGLKPHPERMPPLIADSPKARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVVNAYHLRVR 441          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: AAPK2_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-2 OS=Rattus norvegicus GN=Prkaa2 PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 9.852e-39
Identity = 96/253 (37.94%), Postives = 144/253 (56.92%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVV-KMGFDQNQLVESL-RNRLQNEATVAYYLLLDNR--------FRVSSGYLGAEFQETMESGFNRLHPIEPAVSPVAHRAPGF----------MDYQGMGLRGQLPYER-KWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCR 712
            +WSCGVILYAL CGTLPFDDE++P LFKKI+GG++ +P +L+     L+  ML VDP+KR TI +IR+H WF+  LP YL   P D    A  ID+E +KEV  K    +++++ SL     Q++  VAY+L++DNR        F ++S      F + M      +H I P + P   R P            +D         L  ++ KW LG++S++ P +IM EV +A+++L+  WK +  Y+++ R
Sbjct:  197 IWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIPEYLNRSIATLLMHMLQVDPLKRATIKDIREHEWFKQDLPSYLF--PEDPSYDANVIDDEAVKEVCEKFECTESEVMNSLYSGDPQDQLAVAYHLIIDNRRIMNQASEFYLASSPPTGSFMDDM-----AMH-IPPGLKPHPERMPPLIADSPKARCPLDALNTTKPKSLAVKKAKWHLGIRSQSKPYDIMAEVYRAMKQLDFEWKVVNAYHLRVR 441          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: AAPK1_RAT (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Rattus norvegicus GN=Prkaa1 PE=1 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.890e-38
Identity = 95/241 (39.42%), Postives = 139/241 (57.68%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVV-KMGFDQNQLVESLRNR-LQNEATVAYYLLLDNRFRVSSG---YLGAEFQETM--ESGFNRLHPIE-PAVSPVAHRAPGFMD-YQGMGLRGQLPYERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCR 712
            +WS GVILYAL CGTLPFDD+++P LFKKI  GI+  P +L+P    L+  ML VDPMKR TI +IR+H WF+  LP+YL   P D    +  ID+E LKEV  K    + +++  L NR  Q+   VAY+L++DNR  ++     YL     ++   +    R HP   P +     RA   +D       + Q   + KW LG++S++ P +IM EV +A+++L+  WK +  Y ++ R
Sbjct:  208 IWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLF--PEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVR 446          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: AAPK1_PONAB (5'-AMP-activated protein kinase catalytic subunit alpha-1 (Fragment) OS=Pongo abelii GN=PRKAA1 PE=2 SV=2)

HSP 1 Score: 157.918 bits (398), Expect = 4.890e-38
Identity = 95/241 (39.42%), Postives = 139/241 (57.68%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVV-KMGFDQNQLVESLRNR-LQNEATVAYYLLLDNRFRVSSG---YLGAEFQETM--ESGFNRLHPIE-PAVSPVAHRAPGFMD-YQGMGLRGQLPYERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCR 712
            +WS GVILYAL CGTLPFDD+++P LFKKI  GI+  P +L+P    L+  ML VDPMKR TI +IR+H WF+  LP+YL   P D    +  ID+E LKEV  K    + +++  L NR  Q+   VAY+L++DNR  ++     YL     ++   +    R HP   P +     RA   +D       + Q   + KW LG++S++ P +IM EV +A+++L+  WK +  Y ++ R
Sbjct:  203 IWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLF--PEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVR 441          
BLAST of CF834842 vs. ExPASy Swiss-Prot
Match: AAPK1_HUMAN (5'-AMP-activated protein kinase catalytic subunit alpha-1 OS=Homo sapiens GN=PRKAA1 PE=1 SV=4)

HSP 1 Score: 157.918 bits (398), Expect = 4.890e-38
Identity = 95/241 (39.42%), Postives = 139/241 (57.68%), Query Frame = 2
Query:   17 VWSCGVILYALPCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLIVDPMKRITIPEIRQHPWFQAHLPRYLAVPPPDTMQQAKKIDEEILKEVV-KMGFDQNQLVESLRNR-LQNEATVAYYLLLDNRFRVSSG---YLGAEFQETM--ESGFNRLHPIE-PAVSPVAHRAPGFMD-YQGMGLRGQLPYERKWALGLQSRAHPREIMTEVLKALQELNVGWKKIGHYNMKCR 712
            +WS GVILYAL CGTLPFDD+++P LFKKI  GI+  P +L+P    L+  ML VDPMKR TI +IR+H WF+  LP+YL   P D    +  ID+E LKEV  K    + +++  L NR  Q+   VAY+L++DNR  ++     YL     ++   +    R HP   P +     RA   +D       + Q   + KW LG++S++ P +IM EV +A+++L+  WK +  Y ++ R
Sbjct:  208 IWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQDLPKYLF--PEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLYNRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETPRARHTLDELNPQKSKHQGVRKAKWHLGIRSQSRPNDIMAEVCRAIKQLDYEWKVVNPYYLRVR 446          
The following BLAST results are available for this feature:
BLAST of CF834842 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 185
Match NameE-valueIdentityDescription
KIN10_ARATH1.390e-11785.41SNF1-related protein kinase catalytic subunit alph... [more]
KIN11_ARATH1.594e-10578.54SNF1-related protein kinase catalytic subunit alph... [more]
RKIN1_SECCE1.896e-8268.51Carbon catabolite-derepressing protein kinase OS=S... [more]
AAPK2_PONAB3.386e-3938.315'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_HUMAN3.386e-3938.315'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_PIG5.776e-3938.315'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK2_RAT9.852e-3937.945'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_RAT4.890e-3839.425'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_PONAB4.890e-3839.425'-AMP-activated protein kinase catalytic subunit ... [more]
AAPK1_HUMAN4.890e-3839.425'-AMP-activated protein kinase catalytic subunit ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06D12_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06D12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF834842 ID=CF834842; Name=CF834842; organism=Citrus sinensis; type=EST; length=715bp
CTGGGCCTGACTTTATGTGTGGAGTTGTGGTGTTATATTGTATGCTCTTC
CCTGTGGCACTCTTCCTTTTGATGATGAAAACATTCCCAACCTTTTTAAG
AAAATTAAGGGTGGGATATACACTCTGCCCAGTCATTTGTCTCCGGGTGC
AAGAGATTTGATCCCAAGGATGCTTATAGTTGATCCAATGAAACGAATCA
CCATTCCTGAGATACGTCAGCACCCATGGTTCCAAGCCCATCTTCCGCGT
TATTTAGCTGTGCCCCCTCCAGATACGATGCAACAAGCAAAAAAGATTGA
TGAGGAGATTCTTAAGGAAGTGGTTAAGATGGGATTTGACCAGAACCAAC
TGGTTGAATCTCTTCGCAATAGGTTACAAAACGAGGCTACTGTTGCATAC
TATTTGCTGTTGGACAACCGATTCCGTGTTTCCAGTGGCTACCTTGGAGC
CGAGTTTCAGGAAACTATGGAATCTGGTTTCAACCGTTTGCATCCCATTG
AACCTGCTGTATCACCTGTTGCACACCGTGCTCCAGGATTCATGGATTAT
CAAGGAATGGGTTTAAGAGGACAGTTGCCATATGAAAGGAAATGGGCTCT
TGGACTACAGTCTCGAGCCCATCCACGTGAAATAATGACAGAAGTTCTGA
AAGCTTTGCAAGAACTGAATGTGGGTTGGAAGAAGATTGGGCACTATAAC
ATGAAGTGCAGATGG
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