CF834924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL27_PEA (60S ribosomal protein L27 OS=Pisum sativum GN=RPL27 PE=2 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.170e-36 Identity = 74/81 (91.36%), Postives = 79/81 (97.53%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 MVKFLKPNKAVILLQGRYAG+KAVIVK+FDDGTRE+ YGHCLVAGIKK+P KVI+KDSAKKTAKKSRVKAFVKLVNYQHLM Sbjct: 1 MVKFLKPNKAVILLQGRYAGKKAVIVKTFDDGTREKPYGHCLVAGIKKFPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL273_ARATH (60S ribosomal protein L27-3 OS=Arabidopsis thaliana GN=RPL27C PE=2 SV=2) HSP 1 Score: 148.288 bits (373), Expect = 4.093e-35 Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 MVKFLK NKAVILLQGRYAG+KAVI+KSFDDG R+R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLM Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGNRDRPYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL272_ARATH (60S ribosomal protein L27-2 OS=Arabidopsis thaliana GN=RPL27B PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 5.346e-35 Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 MVKFLK NKAVILLQGRYAG+KAVI+KSFDDGT +R YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F+KLVNYQHLM Sbjct: 1 MVKFLKQNKAVILLQGRYAGKKAVIIKSFDDGTSDRRYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFIKLVNYQHLM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL27_SOLTU (60S ribosomal protein L27 OS=Solanum tuberosum GN=RPL27 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.456e-32 Identity = 66/81 (81.48%), Postives = 74/81 (91.36%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 M KFLKPNKAVILLQG+YAGRKAVIV++FD+GTR+R YGHCLVAGI +YP KVIRKDSAKK KKSRVKAF+KLVNY H+M Sbjct: 1 MEKFLKPNKAVILLQGKYAGRKAVIVRAFDEGTRDRPYGHCLVAGISRYPKKVIRKDSAKKAGKKSRVKAFIKLVNYNHIM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL271_ARATH (60S ribosomal protein L27-1 OS=Arabidopsis thaliana GN=RPL27A PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.243e-32 Identity = 66/81 (81.48%), Postives = 73/81 (90.12%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 MVK +KP KAVILLQGRY G+KAVIVKSFDDGT E+ YGHCLVAG+KKYP KVIRKDSAKKTAKKSRVK F K++NYQH+M Sbjct: 1 MVKCMKPGKAVILLQGRYTGKKAVIVKSFDDGTVEKKYGHCLVAGLKKYPSKVIRKDSAKKTAKKSRVKCFFKVINYQHVM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL27_PYRST (60S ribosomal protein L27 OS=Pyrobotrys stellata GN=RPL27 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.007e-23 Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 MVKFLK K V++L GR+AG+KAVIV++FDDGT R YGH LV G++K P KV ++ S KK AKKS +K F+K VNY HLM Sbjct: 1 MVKFLKSGKVVVVLSGRFAGKKAVIVRNFDDGTSSRPYGHALVVGLQKEPRKVTKRQSQKKQAKKSTLKTFIKTVNYNHLM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL27_HIPCM (60S ribosomal protein L27 OS=Hippocampus comes GN=rpl27 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.784e-22 Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 M KF+KP K V++L GRYAGRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++KAFVK+ NY HLM Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTAPMGKKKIAKRSKIKAFVKVYNYNHLM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL27_DANRE (60S ribosomal protein L27 OS=Danio rerio GN=rpl27 PE=2 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 1.784e-22 Identity = 51/81 (62.96%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 M KF+KP K V++L GRYAGRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++KAFVK+ NY HLM Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVAGIDRYPRKVTATMGKKKIAKRSKIKAFVKVFNYNHLM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL27_ICTPU (60S ribosomal protein L27 OS=Ictalurus punctatus GN=rpl27 PE=2 SV=3) HSP 1 Score: 105.531 bits (262), Expect = 3.043e-22 Identity = 50/81 (61.73%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 M KF+KP K V++L GRYAGRKAVIVK+ DDGT +R Y H LV+GI +YP KV KK AK+S++KAFVK+ NY HLM Sbjct: 1 MGKFMKPGKVVMVLAGRYAGRKAVIVKNIDDGTADRPYSHALVSGIDRYPRKVTATMGKKKVAKRSKIKAFVKVFNYNHLM 81
BLAST of CF834924 vs. ExPASy Swiss-Prot
Match: RL27_RAT (60S ribosomal protein L27 OS=Rattus norvegicus GN=Rpl27 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.778e-22 Identity = 49/81 (60.49%), Postives = 61/81 (75.31%), Query Frame = 2 Query: 494 MVKFLKPNKAVILLQGRYAGRKAVIVKSFDDGTRERAYGHCLVAGIKKYPGKVIRKDSAKKTAKKSRVKAFVKLVNYQHLM 736 M KF+KP K V++L GRY+GRKAVIVK+ DDGT +R Y H LVAGI +YP KV KK AK+S++K+FVK+ NY HLM Sbjct: 1 MGKFMKPGKVVLVLAGRYSGRKAVIVKNIDDGTSDRPYSHALVAGIDRYPRKVTAAMGKKKIAKRSKIKSFVKVYNYNHLM 81 The following BLAST results are available for this feature:
BLAST of CF834924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834924 ID=CF834924; Name=CF834924; organism=Citrus sinensis; type=EST; length=736bpback to top |