CF834950
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL261_ARATH (60S ribosomal protein L26-1 OS=Arabidopsis thaliana GN=RPL26A PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 1.724e-23 Identity = 57/83 (68.67%), Postives = 61/83 (73.49%), Query Frame = -1 Query: 84 KDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVITXXXXXXXXXXXXXXKAKGRACR*QGEG 332 KDDEVQ+VRGTYKGREGKVVQVYRRKWVIHIERI EKVNG+TV VGI PSKVVIT KAKGRA + +G Sbjct: 51 KDDEVQIVRGTYKGREGKVVQVYRRKWVIHIERITREKVNGTTVNVGIQPSKVVITKLRLDKDRKSLLERKAKGRAAADKEKG 133
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL262_ARATH (60S ribosomal protein L26-2 OS=Arabidopsis thaliana GN=RPL26B PE=2 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.753e-21 Identity = 53/83 (63.86%), Postives = 59/83 (71.08%), Query Frame = -1 Query: 84 KDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVITXXXXXXXXXXXXXXKAKGRACR*QGEG 332 KDDEVQVVRGT+KGREGKV+QVYRRKWVIHIERI EKVNGSTV VG+N S V+IT KA GRA + +G Sbjct: 51 KDDEVQVVRGTFKGREGKVMQVYRRKWVIHIERITREKVNGSTVNVGVNASNVMITKLRLDKDRKSLLERKANGRAAADKEKG 133
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL26_BRARA (60S ribosomal protein L26 OS=Brassica rapa GN=RPL26 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 5.191e-20 Identity = 50/83 (60.24%), Postives = 58/83 (69.88%), Query Frame = -1 Query: 84 KDDEVQVVRGTYKGREGKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVITXXXXXXXXXXXXXXKAKGRACR*QGEG 332 KDDE Q+VRGTYKGREGK+ QVYRRK VIHIER+ EKVNG+TV VG+ P+KVVIT KAKGRA + +G Sbjct: 51 KDDEXQIVRGTYKGREGKLXQVYRRKXVIHIERLTREKVNGTTVNVGVQPTKVVITKLRLDKDRKSLLERKAKGRAAADKDKG 133
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL26_MOUSE (60S ribosomal protein L26 OS=Mus musculus GN=Rpl26 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.372e-17 Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = -1 Query: 165 KDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVIT 332 KDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER++ EK NG+TV VGI+PSKVVIT Sbjct: 51 KDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL26_MACFA (60S ribosomal protein L26 OS=Macaca fascicularis GN=RPL26 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.372e-17 Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = -1 Query: 165 KDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVIT 332 KDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER++ EK NG+TV VGI+PSKVVIT Sbjct: 51 KDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL26_HUMAN (60S ribosomal protein L26 OS=Homo sapiens GN=RPL26 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.372e-17 Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = -1 Query: 165 KDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVIT 332 KDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER++ EK NG+TV VGI+PSKVVIT Sbjct: 51 KDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL26_CHICK (60S ribosomal protein L26 (Fragment) OS=Gallus gallus GN=RPL26 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.372e-17 Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = -1 Query: 165 KDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVIT 332 KDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER++ EK NG+TV VGI+PSKVVIT Sbjct: 34 KDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 90
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL26_BOVIN (60S ribosomal protein L26 OS=Bos taurus GN=RPL26 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.372e-17 Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = -1 Query: 165 KDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVIT 332 KDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER++ EK NG+TV VGI+PSKVVIT Sbjct: 51 KDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL26_AILME (60S ribosomal protein L26 OS=Ailuropoda melanoleuca GN=RPL26 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.372e-17 Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = -1 Query: 165 KDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVIT 332 KDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER++ EK NG+TV VGI+PSKVVIT Sbjct: 51 KDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107
BLAST of CF834950 vs. ExPASy Swiss-Prot
Match: RL26L_HUMAN (60S ribosomal protein L26-like 1 OS=Homo sapiens GN=RPL26L1 PE=1 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.372e-17 Identity = 43/57 (75.44%), Postives = 52/57 (91.23%), Query Frame = -1 Query: 165 KDDEVQVVRGTYKGRE-GKVVQVYRRKWVIHIERIKSEKVNGSTVKVGINPSKVVIT 332 KDDEVQVVRG YKG++ GKVVQVYR+K+VI+IER++ EK NG+TV VGI+PSKVVIT Sbjct: 51 KDDEVQVVRGHYKGQQIGKVVQVYRKKYVIYIERVQREKANGTTVHVGIHPSKVVIT 107 The following BLAST results are available for this feature:
BLAST of CF834950 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834950 ID=CF834950; Name=CF834950; organism=Citrus sinensis; type=EST; length=332bpback to top |