CF834966
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA9_ARATH (Auxin-responsive protein IAA9 OS=Arabidopsis thaliana GN=IAA9 PE=1 SV=1) HSP 1 Score: 275.404 bits (703), Expect = 2.390e-73 Identity = 131/159 (82.39%), Postives = 149/159 (93.71%), Query Frame = -2 Query: 297 AAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGL--APRAMEKSKIR 767 AAKAQ+VGWPP+RS+RKN+LATT KN+DEVDG+PG GALF+KVSMDGAPYLRKVDLR+YTNYGELSSALEKMF+ FT+GQCGS+ A G++MLSE+KLKDLL+G +YVLTYEDKDGDWMLVGDVPWEMFID CK+LKIMKG DAIGL APRAMEKSK+R Sbjct: 179 AAKAQIVGWPPVRSYRKNTLATTCKNSDEVDGRPGSGALFVKVSMDGAPYLRKVDLRSYTNYGELSSALEKMFTTFTLGQCGSNGAAGKDMLSETKLKDLLNGKDYVLTYEDKDGDWMLVGDVPWEMFIDVCKKLKIMKGCDAIGLAAAPRAMEKSKMR 337
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA8_ARATH (Auxin-responsive protein IAA8 OS=Arabidopsis thaliana GN=IAA8 PE=2 SV=1) HSP 1 Score: 266.159 bits (679), Expect = 1.450e-70 Identity = 127/156 (81.41%), Postives = 144/156 (92.31%), Query Frame = -2 Query: 303 AAKAQVVGWPPIRSFRKNSLAT-TSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSK 767 AAKAQVVGWPPIRS+RKN++A+ TSKN DEVDGKPG G LF+KVSMDGAPYLRKVDLRTYT+Y +LSSALEKMFSCFT+GQCG H A GRE +SE KLKDLLHGSE+VLTYEDKDGDWMLVGDVPWE+F ++C++LKIMKGSD+IGLAP A+EKSK Sbjct: 161 AAKAQVVGWPPIRSYRKNTMASSTSKNTDEVDGKPGLGVLFVKVSMDGAPYLRKVDLRTYTSYQQLSSALEKMFSCFTLGQCGLHGAQGRERMSEIKLKDLLHGSEFVLTYEDKDGDWMLVGDVPWEIFTETCQKLKIMKGSDSIGLAPGAVEKSK 316
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA27_ARATH (Auxin-responsive protein IAA27 OS=Arabidopsis thaliana GN=IAA27 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.964e-59 Identity = 116/167 (69.46%), Postives = 136/167 (81.44%), Query Frame = -2 Query: 294 AAKAQVVGWPPIRSFRKNSLATTSK----NN---DEVDGKPGPG--ALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 767 A+KAQVVGWPPIRSFRKNS+A++ NN +E + K GP L++KVSM+GAPYLRK+DL+TY +Y ELSSALEKMFSCFTIGQ GSH GR+ L+ES+L DLL GSEYV+TYEDKD DWMLVGDVPWEMFI SCK+L+IMK S+AIGLAPR MEK + RN Sbjct: 139 ASKAQVVGWPPIRSFRKNSMASSQSQKPGNNSETEEAEAKSGPEQPCLYVKVSMEGAPYLRKIDLKTYKSYLELSSALEKMFSCFTIGQFGSHGGCGRDGLNESRLTDLLRGSEYVVTYEDKDSDWMLVGDVPWEMFICSCKKLRIMKSSEAIGLAPRVMEKCRSRN 305
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA30_ORYSJ (Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica GN=IAA30 PE=2 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.838e-57 Identity = 116/165 (70.30%), Postives = 131/165 (79.39%), Query Frame = -2 Query: 294 AAKAQVVGWPPIRSFRKNSLATTS-KNNDEVDG---KPGPGAL---FIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 767 A KAQVVGWPP+RS+RKN LA + K D DG K G GA F+KVSMDGAPYLRKVDL+ Y +Y ELS ALEKMFS FTIG CGSH G ++ESK+ DLL+GSEYV TYEDKDGDWMLVGDVPWEMF++SCKRL+IMKGS+AIGLAPRAMEK K R+ Sbjct: 116 APKAQVVGWPPVRSYRKNILAVQADKGKDAADGGGDKSGAGAAAAAFVKVSMDGAPYLRKVDLKMYKSYLELSKALEKMFSSFTIGNCGSHGVNG---MNESKIADLLNGSEYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGSEAIGLAPRAMEKCKNRS 277
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA21_ORYSJ (Auxin-responsive protein IAA21 OS=Oryza sativa subsp. japonica GN=IAA21 PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 2.654e-56 Identity = 108/163 (66.26%), Postives = 128/163 (78.53%), Query Frame = -2 Query: 294 AAKAQVVGWPPIRSFRKNSLATTS-----KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 767 AAKAQVVGWPPIRS+RKN++A + K++ E P G L++KVSMDGAPYLRKVDL+ Y NY ELS ALEKMFSCFT+G S+ GR+ LS+ +L DL +G+E VLTYEDKD DWMLVGDVPW MF DSC+RL+IMKGSDA+GLAPRA +KSK RN Sbjct: 104 AAKAQVVGWPPIRSYRKNTMAMSQPALKGKDDGEAKQAPASGCLYVKVSMDGAPYLRKVDLKMYKNYKELSLALEKMFSCFTVGHGESNGKSGRDGLSDCRLMDLKNGTELVLTYEDKDEDWMLVGDVPWRMFTDSCRRLRIMKGSDAVGLAPRATDKSKNRN 266
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA17_ORYSJ (Auxin-responsive protein IAA17 OS=Oryza sativa subsp. japonica GN=IAA17 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.180e-52 Identity = 107/160 (66.88%), Postives = 126/160 (78.75%), Query Frame = -2 Query: 294 AAKAQVVGWPPIRSFRKNSLATTS--KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 767 AAKAQVVGWPPIRS+RKN++AT + ++ + K G G L++KVSMDGAPYLRKVDL+TY NY +LS+ALEKMF FT G+ G LSES+ KD EYVLTYEDKDGDWMLVGDVPWEMF +SC+RL+IMKGSDAIGLAPRA++KSK RN Sbjct: 112 AAKAQVVGWPPIRSYRKNTMATNQLKSSKEDAEAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDLSTALEKMFIGFTTGKDG---------LSESR-KD----GEYVLTYEDKDGDWMLVGDVPWEMFANSCRRLRIMKGSDAIGLAPRAVDKSKNRN 257
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: AUX28_SOYBN (Auxin-induced protein AUX28 OS=Glycine max GN=AUX28 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 5.180e-52 Identity = 102/159 (64.15%), Postives = 120/159 (75.47%), Query Frame = -2 Query: 294 AKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAI--GLAPRAMEKSKIRN 764 AK QVVGWPP+RSFRKN LA +E + P A F+KVSMDGAPYLRKVDL+ Y +Y ELS +L KMFS FT G C S ++ ++ESKL DLL+ S+YV TYEDKDGDWMLVGDVPWEMF++SCKRL+IMKG +AI GLAPRAM K K R+ Sbjct: 87 AKTQVVGWPPVRSFRKNMLAVQKSVGEESEKNSSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTFGNCESQGM--KDFMNESKLNDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKCKNRS 243
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA3_ORYSJ (Auxin-responsive protein IAA3 OS=Oryza sativa subsp. japonica GN=IAA3 PE=2 SV=1) HSP 1 Score: 202.216 bits (513), Expect = 2.571e-51 Identity = 105/160 (65.62%), Postives = 120/160 (75.00%), Query Frame = -2 Query: 294 AAKAQVVGWPPIRSFRKNSLATTS--KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 767 AAKAQVVGWPPIRS+RKN++AT N ++VD K G G L++KVSMDGAPYLRKVDL+TY NY ++S LEKMF F+ G+ G+ KD EYVLTYEDKDGDWMLVGDVPWEMF DSC+RL+IMKGSDAIGLAPRA EKSK RN Sbjct: 119 AAKAQVVGWPPIRSYRKNTMATNQIKSNKEDVDAKQGQGFLYVKVSMDGAPYLRKVDLKTYKNYKDMSLGLEKMFIGFSTGKEGAENQ-----------KD----GEYVLTYEDKDGDWMLVGDVPWEMFTDSCRRLRIMKGSDAIGLAPRAGEKSKNRN 263
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA16_ARATH (Auxin-responsive protein IAA16 OS=Arabidopsis thaliana GN=IAA16 PE=2 SV=1) HSP 1 Score: 201.83 bits (512), Expect = 3.358e-51 Identity = 102/172 (59.30%), Postives = 127/172 (73.84%), Query Frame = -2 Query: 294 AKAQVVGWPPIRSFRKNSLA-------TTSKNNDEVDGKPGPGA--------LFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKSKIRN 764 AKAQVVGWPP+RSFRKN ++ ++ ND+ G G + ++KVSMDGAPYLRK+DL+ Y Y +LS+AL KMFS FTIG G ++ ++ESKL DLL+GS+YV TYEDKDGDWMLVGDVPWEMF+DSCKR++IMKGS+AIGLAPRA+EK K R+ Sbjct: 67 AKAQVVGWPPVRSFRKNVMSGQKPTTGDATEGNDKTSGSSGATSSASACATVAYVKVSMDGAPYLRKIDLKLYKTYQDLSNALSKMFSSFTIGNYGPQGM--KDFMNESKLIDLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVDSCKRIRIMKGSEAIGLAPRALEKCKNRS 236
BLAST of CF834966 vs. ExPASy Swiss-Prot
Match: IAA19_ORYSJ (Auxin-responsive protein IAA19 OS=Oryza sativa subsp. japonica GN=IAA19 PE=2 SV=1) HSP 1 Score: 200.29 bits (508), Expect = 9.769e-51 Identity = 93/155 (60.00%), Postives = 121/155 (78.06%), Query Frame = -2 Query: 306 AAKAQVVGWPPIRSFRKNSLATTS-KNNDEVDGKPGPGALFIKVSMDGAPYLRKVDLRTYTNYGELSSALEKMFSCFTIGQCGSHEAPGREMLSESKLKDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFIDSCKRLKIMKGSDAIGLAPRAMEKS 767 AAKAQVVGWPP+RS+RKN+LA ++ K E GK G ++KVSMDGAPYLRKVDL+TY++Y +LS ALEKMFSCF G+ SH+ R+ L++ D L EYVLTYEDKD DWMLVGD+PW++F SC++L+IM+GSDA G+APR++E++ Sbjct: 123 AAKAQVVGWPPVRSYRKNTLAASATKTKGEDQGKSEVGCCYVKVSMDGAPYLRKVDLKTYSSYEDLSLALEKMFSCFITGRSSSHKTSKRDRLTDGSRADALKDQEYVLTYEDKDADWMLVGDLPWDLFTTSCRKLRIMRGSDAAGMAPRSLEQT 277 The following BLAST results are available for this feature:
BLAST of CF834966 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 67
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834966 ID=CF834966; Name=CF834966; organism=Citrus sinensis; type=EST; length=768bpback to top |