CF834983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC_HUMAN (Serine hydroxymethyltransferase, cytosolic OS=Homo sapiens GN=SHMT1 PE=1 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 8.611e-19 Identity = 47/89 (52.81%), Postives = 64/89 (71.91%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYG--KLLKDFNKGLVNNK---DMEALKADVEKFASSFDMPG 540 GD SAL P G+R+GTPA+TSRGLLEKDF+++ F HRG+ LTL+IQ + G LK+F + L +K ++AL+ +VE FAS F +PG Sbjct: 391 GDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQAAVQALREEVESFASLFPLPG 479
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC2_DICDI (Serine hydroxymethyltransferase 2 OS=Dictyostelium discoideum GN=shmt2 PE=3 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.125e-18 Identity = 38/85 (44.71%), Postives = 66/85 (77.65%), Query Frame = -3 Query: 289 FGDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYGKLLKDFNKGLVNNKDMEALKADVEKFASSFDMPG 543 +GD++A+APGGVR+G PA+TSRGL E+DF ++ +F R V ++L+IQ + GK + DF + + +N+D++ ++ +V++F++ F MPG Sbjct: 395 YGDTNAIAPGGVRLGAPALTSRGLKEQDFVKVVDFLDRVVKISLDIQSKVGKKMPDFQRAIADNQDLKQIRQEVKEFSTKFGMPG 479
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC_PONAB (Serine hydroxymethyltransferase, cytosolic OS=Pongo abelii GN=SHMT1 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 1.918e-18 Identity = 47/89 (52.81%), Postives = 63/89 (70.79%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYG--KLLKDFNKGLVNNK---DMEALKADVEKFASSFDMPG 540 GD SAL P G+R+GTPA+TSRGLLEKDF+++ F HRG+ LTL+IQ + G LK+F + L +K ++AL+ VE FAS F +PG Sbjct: 391 GDRSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTLQIQSDTGVRATLKEFKERLAGDKYQGAVQALREKVESFASLFPLPG 479
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC_RABIT (Serine hydroxymethyltransferase, cytosolic OS=Oryctolagus cuniculus GN=SHMT1 PE=1 SV=2) HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17 Identity = 44/90 (48.89%), Postives = 63/90 (70.00%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYG--KLLKDFNKGLV----NNKDMEALKADVEKFASSFDMPG 540 GD SAL P G+R+GTPA+TSRGLLEKDF+++ F HRG+ LT++IQ + G LK+F + L + + + AL+ +VE FA+ F +PG Sbjct: 391 GDKSALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIELTVQIQDDTGPRATLKEFKEKLAGDEKHQRAVRALRQEVESFAALFPLPG 480
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC_BOVIN (Serine hydroxymethyltransferase, cytosolic OS=Bos taurus GN=SHMT1 PE=2 SV=3) HSP 1 Score: 88.5817 bits (218), Expect = 2.121e-17 Identity = 45/90 (50.00%), Postives = 64/90 (71.11%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYG--KLLKDFNKGLV----NNKDMEALKADVEKFASSFDMPG 540 GD SAL P G+R+GTPA+TSRGLLE+DF+++ F HRG+ LTL+IQ G LK+F + L +++ + AL+A+VE FA+ F +PG Sbjct: 391 GDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAEEHHRAVAALRAEVESFATLFPLPG 480
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC_MOUSE (Serine hydroxymethyltransferase, cytosolic OS=Mus musculus GN=Shmt1 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.770e-17 Identity = 43/90 (47.78%), Postives = 63/90 (70.00%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYG--KLLKDFNKGLVNNKDMEA----LKADVEKFASSFDMPG 540 GD SAL P G+R+GTPA+TSRGLLE+DF+++ F HRG+ LTL+IQ LK+F + L ++ +++ L+ +VE FAS+F +PG Sbjct: 385 GDKSALRPSGLRLGTPALTSRGLLEEDFQKVAHFIHRGIELTLQIQSHMATKATLKEFKEKLAGDEKIQSAVATLREEVENFASNFSLPG 474
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC_CAEEL (Serine hydroxymethyltransferase OS=Caenorhabditis elegans GN=mel-32 PE=1 SV=2) HSP 1 Score: 88.1965 bits (217), Expect = 2.770e-17 Identity = 43/88 (48.86%), Postives = 58/88 (65.91%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYGKLLKDFNKGLVNN----KDMEALKADVEKFASSFDMPG 540 GD SAL PGG+R+GTPA+TSRG E+DFE++G+F H GV + + E GK LKDF N KD+ L VE+F++ F++PG Sbjct: 416 GDVSALRPGGIRLGTPALTSRGFQEQDFEKVGDFIHEGVQIAKKYNAEAGKTLKDFKSFTETNEPFKKDVADLAKRVEEFSTKFEIPG 503
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC_SHEEP (Serine hydroxymethyltransferase, cytosolic OS=Ovis aries GN=SHMT1 PE=1 SV=3) HSP 1 Score: 87.4261 bits (215), Expect = 4.725e-17 Identity = 45/90 (50.00%), Postives = 62/90 (68.89%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYG--KLLKDFNKGLV----NNKDMEALKADVEKFASSFDMPG 540 GD SAL P G+R+GTPA+TSRGLLE+DF ++ F HRG+ LTL+IQ G LK+F + L + + + AL+A+VE FA+ F +PG Sbjct: 391 GDKSALRPSGLRLGTPALTSRGLLEEDFRKVAHFIHRGIELTLQIQDAVGVKATLKEFMEKLAGAEEHQRAVTALRAEVESFATLFPLPG 480
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYM_ARATH (Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana GN=SHM1 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.060e-17 Identity = 42/99 (42.42%), Postives = 67/99 (67.68%), Query Frame = -3 Query: 259 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKE-YGKLLKDFNKGLVNNKDMEA----LKADVEKFASSFDMPGFKMSEMKYKD 540 GD SA+ PGG+R+GTPA+TSRG +E+DF ++ E+F + VT+ L+++ E G LKDF + ++ +++ L+ +VE+FA F GF+ MKYK+ Sbjct: 419 GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEYFDKAVTIALKVKSEAQGTKLKDFVSAMESSSTIQSEIAKLRHEVEEFAKQFPTIGFEKETMKYKN 517
BLAST of CF834983 vs. ExPASy Swiss-Prot
Match: GLYC1_DICDI (Serine hydroxymethyltransferase 1 OS=Dictyostelium discoideum GN=shmt1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.375e-16 Identity = 41/84 (48.81%), Postives = 62/84 (73.81%), Query Frame = -3 Query: 289 GDSSALAPGGVRIGTPAMTSRGLLEKDFEQIGEFFHRGVTLTLEIQKEYGKLLKDFNKGLVNNKDMEALKADVEKFASSFDMPG 540 GD++A++PGG+RIG+ A+TSRGL E DFE+I +F R V+++LEIQ GK L DF + +K++ L+ +VE+F+S F +PG Sbjct: 373 GDTNAISPGGIRIGSSALTSRGLKEADFEKIADFLDRIVSISLEIQGRVGKKLVDFVVEINKSKELLDLRKEVEEFSSKFTLPG 456 The following BLAST results are available for this feature:
BLAST of CF834983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834983 ID=CF834983; Name=CF834983; organism=Citrus sinensis; type=EST; length=545bpback to top |