CF834993
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: AS1_ARATH (Transcription factor AS1 OS=Arabidopsis thaliana GN=AS1 PE=1 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 1.351e-65 Identity = 118/145 (81.38%), Postives = 130/145 (89.66%), Query Frame = 3 Query: 204 MKERQRWRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKDSIRIVDPIDEHKYDQILETFAEKLVNNHSFVM 638 MKERQRW EEDALLRAYV+Q+GP+EW VS+RMN PLNRDAKSCLERWKNYLKPGIKKGSLT+EEQ LVI LQ KHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE+K+S + V+PIDE KYD+ILE+FAEKLV S V+ Sbjct: 1 MKERQRWSGEEDALLRAYVRQFGPREWHLVSERMNKPLNRDAKSCLERWKNYLKPGIKKGSLTEEEQRLVIRLQEKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREEKESNKRVEPIDESKYDRILESFAEKLVKERSNVV 145
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: RS2_ORYSJ (Protein rough sheath 2 homolog OS=Oryza sativa subsp. japonica GN=RS2 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 2.915e-60 Identity = 112/150 (74.67%), Postives = 126/150 (84.00%), Query Frame = 3 Query: 204 MKERQRWRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE--QKDSIRIVDPIDEH-------KYDQILETFAEKLVNNH 626 M+ERQRWR EEDA+L AYV+QYGP+EWS VSQRMN PL+RDAKSCLERWKNYL+PGIKKGSLTD+EQ LVI LQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE +D R+ P+D +YD +LE FA+KLVN+H Sbjct: 6 MRERQRWRPEEDAILLAYVRQYGPREWSLVSQRMNRPLHRDAKSCLERWKNYLRPGIKKGSLTDDEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDRDRRRLPPPLDGDERGCAGGRYDWLLEDFADKLVNDH 155
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: RS2_MAIZE (Protein rough sheath 2 OS=Zea mays GN=RS2 PE=1 SV=1) HSP 1 Score: 227.254 bits (578), Expect = 5.497e-59 Identity = 110/141 (78.01%), Postives = 121/141 (85.82%), Query Frame = 3 Query: 204 MKERQRWRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKDSIR---IVDPIDEHKYDQILETFAEKLV 617 MKERQRWR EEDA+LRAYV+QYGP+EW VSQRMN L+RDAKSCLERWKNYL+PGIKKGSLT+EEQ LVI LQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRE +DS R P + +Y+ +LE FAEKLV Sbjct: 1 MKERQRWRPEEDAVLRAYVRQYGPREWHLVSQRMNVALDRDAKSCLERWKNYLRPGIKKGSLTEEEQRLVIRLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQRELRDSRRPPPEPSPDERGRYEWLLENFAEKLV 141
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: MYB59_ARATH (Transcription factor MYB59 OS=Arabidopsis thaliana GN=MYB59 PE=2 SV=2) HSP 1 Score: 102.834 bits (255), Expect = 1.564e-21 Identity = 48/116 (41.38%), Postives = 70/116 (60.34%), Query Frame = 3 Query: 192 LLLEMKERQRWRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQK 539 L+ E + W +ED LL +V +G + W FV++ LNR KSC RW NYL PG+K+G +T +E+ LV+ L AK GN+W KIA ++PGRT + +W K+ +E+K Sbjct: 3 LVQEEYRKGPWTEQEDILLVNFVHLFGDRRWDFVAKVSG--LNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK 116
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: MYB48_ARATH (Transcription factor MYB48 OS=Arabidopsis thaliana GN=MYB48 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.483e-21 Identity = 45/106 (42.45%), Postives = 66/106 (62.26%), Query Frame = 3 Query: 222 WRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQK 539 W +ED LL +V +G + W F+++ LNR KSC RW NYL PG+K+G +T +E+ LV+ L AK GN+W KIA ++PGRT + +W K+ +E+K Sbjct: 12 WTEQEDILLVNFVHLFGDRRWDFIAKVSG--LNRTGKSCRLRWVNYLHPGLKRGKMTPQEERLVLELHAKWGNRWSKIARKLPGRTDNEIKNYWRTHMRKKAQEKK 115
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: MY104_ARATH (Transcription factor MYB104 OS=Arabidopsis thaliana GN=MYB104 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 3.851e-20 Identity = 48/106 (45.28%), Postives = 65/106 (61.32%), Query Frame = 3 Query: 195 LLEMKE---RQRWRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWW 503 LL MK+ + +W+ EED +L+ YV QYG + W+ V +R P N SC RW N+LKP +KKG TDEE+ V+ L A GNKW ++A E PGRT + +W Sbjct: 9 LLAMKKTFTKSKWKPEEDRILKDYVIQYGDRTWTHVPKRTGLPHN--PASCRFRWMNHLKPSLKKGPFTDEEEKRVLQLHAVLGNKWSQMAREFPGRTDNEIKNFW 112
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: MYB82_ARATH (Transcription factor MYB82 OS=Arabidopsis thaliana GN=MYB82 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 5.030e-20 Identity = 43/112 (38.39%), Postives = 68/112 (60.71%), Query Frame = 3 Query: 210 ERQRWRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQKDS 545 +R W+ EED +L++YV+ +G W+ +S+R L R KSC RWKNYL+P IK+GS++ +EQ L+I + GN+W IA +PGRT + +W K+ ++ + Sbjct: 13 KRGLWKPEEDMILKSYVETHGEGNWADISRRSG--LKRGGKSCRLRWKNYLRPNIKRGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQN 122
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.569e-20 Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 3 Query: 222 WRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQR 530 W + EDA+L YVK++G W+ V + NT L R KSC RW N+L+P +KKG+ T EE+ L+I L +K GNKW ++AA +PGRT + +W ++ QR Sbjct: 45 WTSAEDAILVDYVKKHGEGNWNAVQK--NTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQR 145
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.569e-20 Identity = 46/103 (44.66%), Postives = 66/103 (64.08%), Query Frame = 3 Query: 222 WRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQR 530 W + EDA+L YVK++G W+ V + NT L R KSC RW N+L+P +KKG+ T EE+ L+I L +K GNKW ++AA +PGRT + +W ++ QR Sbjct: 45 WTSAEDAILVDYVKKHGEGNWNAVQK--NTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQR 145
BLAST of CF834993 vs. ExPASy Swiss-Prot
Match: MYBA1_ORYSJ (Myb-related protein MYBAS1 OS=Oryza sativa subsp. japonica GN=MYBAS1 PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.464e-19 Identity = 44/118 (37.29%), Postives = 70/118 (59.32%), Query Frame = 3 Query: 195 LLEMKERQR---WRTEEDALLRAYVKQYGPKEWSFVSQRMNTPLNRDAKSCLERWKNYLKPGIKKGSLTDEEQHLVIHLQAKHGNKWKKIAAEVPGRTAKRLGKWWEVFKEKQQREQK 539 ++ ++E R W +ED L V+ +G + W FV++ LNR KSC RW NYL PG+K G ++ +E+HL+I L A+ GN+W +IA +PGRT + +W K+ +E++ Sbjct: 1 MVTVREEMRKGPWTEQEDLQLVCTVRLFGDRRWDFVAKVSG--LNRTGKSCRLRWVNYLHPGLKHGRMSPKEEHLIIELHARWGNRWSRIARRLPGRTDNEIKNYWRTHMRKKAQERR 116 The following BLAST results are available for this feature:
BLAST of CF834993 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 76
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Sequences
The
following sequences are available for this feature:
EST sequence >CF834993 ID=CF834993; Name=CF834993; organism=Citrus sinensis; type=EST; length=647bpback to top |