CF835011

Overview
NameCF835011
Unique NameCF835011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length776
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
CF835011_ssr475 microsatellite CF835011_ssr475:475..486. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: SERK2_ARATH (Somatic embryogenesis receptor kinase 2 OS=Arabidopsis thaliana GN=SERK2 PE=1 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.451e-102
Identity = 185/210 (88.10%), Postives = 193/210 (91.90%), Query Frame = -2
Query:  146 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 775
            YL DH DPKIIHRDVKAANILLDEEFEAVVGDFGLA+LMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV           LVDPDLQ+NY EAEVEQLIQVALLCTQ SPM+RPKMSEVVRMLEGDGLAE+WDEWQKVEVLRQEVEL+ HP SDWI+DST+NLHA+ELSGPR
Sbjct:  419 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLARLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQSNYTEAEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAEKWDEWQKVEVLRQEVELSSHPTSDWILDSTDNLHAMELSGPR 628          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: SERK1_ARATH (Somatic embryogenesis receptor kinase 1 OS=Arabidopsis thaliana GN=SERK1 PE=1 SV=2)

HSP 1 Score: 369.777 bits (948), Expect = 9.402e-102
Identity = 182/210 (86.67%), Postives = 193/210 (91.90%), Query Frame = -2
Query:  146 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 775
            YL DH DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWV           LVDPDLQ NY E E+EQ+IQVALLCTQGSPM+RPKMSEVVRMLEGDGLAE+WDEWQKVE+LR+E++L+P+PNSDWI+DST NLHAVELSGPR
Sbjct:  416 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEMLVDPDLQTNYEERELEQVIQVALLCTQGSPMERPKMSEVVRMLEGDGLAEKWDEWQKVEILREEIDLSPNPNSDWILDSTYNLHAVELSGPR 625          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: BAK1_ARATH (BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana GN=BAK1 PE=1 SV=2)

HSP 1 Score: 320.857 bits (821), Expect = 5.009e-87
Identity = 167/213 (78.40%), Postives = 175/213 (82.16%), Query Frame = -2
Query:  146 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPH--PNSDWIV-DSTENLHAVELSGPR 775
            YL DH DPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQRAFDLARLANDDDVMLLDWV           LVD DLQ NY + EVEQLIQVALLCTQ SPM+RPKMSEVVRMLEGDGLAERW+EWQK E+ RQ+     H    S WI+ DST  +     SGPR
Sbjct:  403 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERWEEWQKEEMFRQDFNYPTHHPAVSGWIIGDSTSQIENEYPSGPR 615          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: SERK4_ARATH (Somatic embryogenesis receptor kinase 4 OS=Arabidopsis thaliana GN=SERK4 PE=1 SV=2)

HSP 1 Score: 300.827 bits (769), Expect = 5.364e-81
Identity = 154/213 (72.30%), Postives = 173/213 (81.22%), Query Frame = -2
Query:  146 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQE--VELAPHPNSDWIVDSTENLHAVEL-SGPR 775
            YL DH D KIIHRDVKAANILLDEEFEAVVGDFGLAKLM+Y D+HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQ+AFDLARLANDDD+MLLDWV           LVD +L+  YVE EVEQLIQ+ALLCTQ S M+RPKMSEVVRMLEGDGLAERW+EWQK E+   +   +  PH  +DW++  + +L   +  SGPR
Sbjct:  408 YLHDHCDQKIIHRDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGDGLAERWEEWQKEEMPIHDFNYQAYPHAGTDWLIPYSNSLIENDYPSGPR 620          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: SERK5_ARATH (Somatic embryogenesis receptor kinase 5 OS=Arabidopsis thaliana GN=SERK5 PE=1 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 3.477e-80
Identity = 153/213 (71.83%), Postives = 172/213 (80.75%), Query Frame = -2
Query:  146 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQE--VELAPHPNSDWIVDSTENLHAVEL-SGPR 775
            YL DH D KIIH DVKAANILLDEEFEAVVGDFGLAKLM+Y D+HVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYG+MLLELITGQ+AFDLARLANDDD+MLLDWV           LVD +L+  YVE EVEQLIQ+ALLCTQ S M+RPKMSEVVRMLEGDGLAERW+EWQK E+   +   +  PH  +DW++  + +L   +  SGPR
Sbjct:  389 YLHDHCDQKIIHLDVKAANILLDEEFEAVVGDFGLAKLMNYNDSHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQKAFDLARLANDDDIMLLDWVKEVLKEKKLESLVDAELEGKYVETEVEQLIQMALLCTQSSAMERPKMSEVVRMLEGDGLAERWEEWQKEEMPIHDFNYQAYPHAGTDWLIPYSNSLIENDYPSGPR 601          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5129_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS=Arabidopsis thaliana GN=At5g10290 PE=1 SV=1)

HSP 1 Score: 275.789 bits (704), Expect = 1.848e-73
Identity = 140/210 (66.67%), Postives = 162/210 (77.14%), Query Frame = -2
Query:  146 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWDEWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 775
            YL +H +PKIIHRDVKAAN+LLDE+FEAVVGDFGLAKL+D + T+VTT VRGT+GHIAPEYLSTGKSSE+TDVFGYGIMLLEL+TGQRA D +RL  +DDV+LLD V           +VD +L   Y++ EVE +IQVALLCTQGSP DRP MSEVVRMLEG+GLAERW+EWQ VEV R+          DW  DS  N  A+ELSG R
Sbjct:  404 YLHEHCNPKIIHRDVKAANVLLDEDFEAVVGDFGLAKLVDVRRTNVTTQVRGTMGHIAPEYLSTGKSSERTDVFGYGIMLLELVTGQRAIDFSRLEEEDDVLLLDHVKKLEREKRLGAIVDKNLDGEYIKEEVEMMIQVALLCTQGSPEDRPVMSEVVRMLEGEGLAERWEEWQNVEVTRRHEFERLQRRFDWGEDSMHNQDAIELSGGR 613          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y2239_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana GN=At2g23950 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 1.203e-56
Identity = 113/170 (66.47%), Postives = 132/170 (77.65%), Query Frame = -2
Query:  266 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERW 775
            YL +  DPKIIHRDVKAANILLDE FEAVVGDFGLAKL++++D+HVTTAVRGT+GHIAPEYLSTG+SSEKTDVFG+GI+LLELITG RA +  +  +    M L+WV           LVD +L   Y   EV +++QVALLCTQ  P  RPKMSEVV+MLEGDGLAERW
Sbjct:  409 YLHEQCDPKIIHRDVKAANILLDEYFEAVVGDFGLAKLLNHEDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGMRALEFGKSVSQKGAM-LEWVRKLHKEMKVEELVDRELGTTYDRIEVGEMLQVALLCTQFLPAHRPKMSEVVQMLEGDGLAERW 577          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y5457_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana GN=At5g45780 PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 7.070e-49
Identity = 109/213 (51.17%), Postives = 144/213 (67.61%), Query Frame = -2
Query:  146 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGDGLAERWD---EWQKVEVLRQEVELAPHPNSDWIVDSTENLHAVELSGPR 775
            YL +  +PKIIHRDVKAANILLDE FEA+VGDFGLAKL+D +D+HVTTAVRGTIGHIAPEYLSTG+SSEKTDVFG+G+++LELITG +  D          M+L WV           +VD DL+  + +  +E+++++ALLCTQ  P  RP+MS+V+++LE  GL E+ +   E +   V R       H    +I++      A+ELSGPR
Sbjct:  413 YLHEQCNPKIIHRDVKAANILLDESFEAIVGDFGLAKLLDQRDSHVTTAVRGTIGHIAPEYLSTGQSSEKTDVFGFGVLILELITGHKMIDQGN-GQVRKGMILSWVRTLKAEKRFAEMVDRDLKGEFDDLVLEEVVELALLCTQPHPNLRPRMSQVLKVLE--GLVEQCEGGYEARAPSVSRNYSN--GHEEQSFIIE------AIELSGPR 614          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y2296_ARATH (Probable receptor-like protein kinase At2g42960 OS=Arabidopsis thaliana GN=At2g42960 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 5.811e-35
Identity = 71/164 (43.29%), Postives = 110/164 (67.07%), Query Frame = -2
Query:  284 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEGD 775
            YL +  +PK++HRD+KA+NIL+D+EF A + DFGLAKL+D  ++H+TT V GT G++APEY +TG  +EK+D++ +G++LLE ITG+   D  R AN  +V L++W+           +VDP L+    ++ +++ + V+L C       RP+MS+V RMLE D
Sbjct:  296 YLHEAIEPKVVHRDIKASNILIDDEFNAKLSDFGLAKLLDSGESHITTRVMGTFGYVAPEYANTGLLNEKSDIYSFGVLLLEAITGRDPVDYGRPAN--EVNLVEWLKMMVGTRRAEEVVDPRLEPRPSKSALKRALLVSLRCVDPEAEKRPRMSQVARMLESD 457          
BLAST of CF835011 vs. ExPASy Swiss-Prot
Match: Y1765_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g07650 OS=Arabidopsis thaliana GN=At1g07650 PE=1 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.164e-33
Identity = 70/163 (42.94%), Postives = 104/163 (63.80%), Query Frame = -2
Query:  287 YLQDHGDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGIMLLELITGQRAFDLARLANDDDVMLLDWVXXXXXXXXXXXLVDPDLQNNYVEAEVEQLIQVALLCTQGSPMDRPKMSEVVRMLEG 775
            +L +    KI+HRD+KA+N+LLD++  A + DFGLAKL D  +TH++T + GTIG++APEY   G  +EK DV+ +G++ LE+++G+   +      +D V LLDW            LVDP L ++Y E E   ++ VAL+CT  SP  RP MS+VV ++EG
Sbjct:  792 FLHEESRIKIVHRDIKASNVLLDKDLNAKISDFGLAKLNDDGNTHISTRIAGTIGYMAPEYAMRGYLTEKADVYSFGVVALEIVSGKSNTNFR--PTEDFVYLLDWAYVLQERGSLLELVDPTLASDYSEEEAMLMLNVALMCTNASPTLRPTMSQVVSLIEG 952          
The following BLAST results are available for this feature:
BLAST of CF835011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 244
Match NameE-valueIdentityDescription
SERK2_ARATH1.451e-10288.10Somatic embryogenesis receptor kinase 2 OS=Arabido... [more]
SERK1_ARATH9.402e-10286.67Somatic embryogenesis receptor kinase 1 OS=Arabido... [more]
BAK1_ARATH5.009e-8778.40BRASSINOSTEROID INSENSITIVE 1-associated receptor ... [more]
SERK4_ARATH5.364e-8172.30Somatic embryogenesis receptor kinase 4 OS=Arabido... [more]
SERK5_ARATH3.477e-8071.83Somatic embryogenesis receptor kinase 5 OS=Arabido... [more]
Y5129_ARATH1.848e-7366.67Probable LRR receptor-like serine/threonine-protei... [more]
Y2239_ARATH1.203e-5666.47Probable LRR receptor-like serine/threonine-protei... [more]
Y5457_ARATH7.070e-4951.17Probable LRR receptor-like serine/threonine-protei... [more]
Y2296_ARATH5.811e-3543.29Probable receptor-like protein kinase At2g42960 OS... [more]
Y1765_ARATH4.164e-3342.94Probable LRR receptor-like serine/threonine-protei... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06I10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06I10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835011 ID=CF835011; Name=CF835011; organism=Citrus sinensis; type=EST; length=776bp
CAATGCTGAAGGGCTTACTGAAATCCTTATATCCTCGTTAAATTTAAAAA
AAAAAAATCCAAGAACCCTTATGATTAAAAAAAGGAATAAAAAAAAGTAG
TAAAATTTTCCTCTTTACTTATAGCTAATAGGAGTGACAGGGTCACCTTG
GACCAGATAACTCAACGGCATGAAGATTTTCTGTTGAGTCAACTATCCAA
TCTGAATTAGGATGAGGGGCTAATTCTACTTCTTGGCGGAGAACTTCCAC
CTTTTGCCACTCATCCCACCGCTCTGCCAAGCCATCACCTTCAAGCATTC
TAACAACTTCCGACATCTTGGGCCGGTCCATAGGGGAGCCTTGAGTGCAG
AGCAACGCAACCTGGATAAGTTGCTCCACCTCAGCTTCCACATAATTGTT
CTGGAGATCAGGGTCAACTAGCATTTCTAACTTCTTTTCCTTCAGAAGTC
CTTTCACCCAATCAAGCAGCATGACATCATCATCATTTGCCAGACGAGCA
AGATCAAAGGCTCTCTGTCCAGTGATTAGCTCTAGAAGCATAATCCCATA
ACCAAAGACATCAGTTTTCTCTGAAGATTTTCCAGTAGAAAGGTATTCTG
GAGCTATATGCCCAATGGTGCCACGGACTGCCGTAGTGACATGGGTATCC
TTGTAGTCCATAAGTTTAGCCAACCCAAAGTCCCCAACAACAGCTTCAAA
CTCCTCATCCAACAAAATGTTAGCCGCTTTCACATCACGGTGAATGATCT
TTGGATCACCATGATCCTGCAAATAC
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