CF835040
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_TOBAC (Isocitrate dehydrogenase [NADP] OS=Nicotiana tabacum PE=2 SV=1) HSP 1 Score: 356.295 bits (913), Expect = 7.846e-98 Identity = 170/187 (90.91%), Postives = 180/187 (96.26%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARL 563 + +D+FQEVYEANWKS +E AGIWYEHRLIDDM AYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAW+RGLAHRA LDNN RLLDFTEKLEAACIG VESGKMTKDLALIIHGSK++R+HYLNTEEFIDAVAD+L+ARL Sbjct: 224 RFKDIFQEVYEANWKSKYEEAGIWYEHRLIDDMAAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLALIIHGSKLSRDHYLNTEEFIDAVADELKARL 410
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_SOYBN (Isocitrate dehydrogenase [NADP] OS=Glycine max GN=IDH1 PE=2 SV=2) HSP 1 Score: 355.14 bits (910), Expect = 1.748e-97 Identity = 170/188 (90.43%), Postives = 183/188 (97.34%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLS 566 + +D+FQEVYEA+WKS FEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD+NA+LLDFTEKLEAACIG VE+GKMTKDLALI+HGSK++REHYLNTEEFIDAVA +L ARLS Sbjct: 225 RFKDIFQEVYEASWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEAACIGVVEAGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELSARLS 412
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_SOLTU (Isocitrate dehydrogenase [NADP] OS=Solanum tuberosum GN=ICDH-1 PE=2 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 2.982e-97 Identity = 172/188 (91.49%), Postives = 181/188 (96.28%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLAL-IIHGSKMTREHYLNTEEFIDAVADDLRARL 563 + +D+FQEVYEANWKS +E AGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAW+RGLAHRA LDNN RLLDFTEKLEAACIG VESGKMTKDLAL IIHGSK++REHYLNTEEFIDAVAD+L+ARL Sbjct: 224 RFKDIFQEVYEANWKSKYEEAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWTRGLAHRATLDNNERLLDFTEKLEAACIGAVESGKMTKDLALIIIHGSKLSREHYLNTEEFIDAVADELKARL 411
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHP_MEDSA (Isocitrate dehydrogenase [NADP], chloroplastic (Fragment) OS=Medicago sativa PE=2 SV=1) HSP 1 Score: 351.288 bits (900), Expect = 2.524e-96 Identity = 167/188 (88.83%), Postives = 181/188 (96.28%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHGSKMTREHYLNTEEFIDAVADDLRARLS 566 + +D+FQEVYEA WKS +EAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRH+RVHQKGGETSTNSIASIFAW+RGLAHRAKLD+NA LLDFTEKLEAACIG VESGKMTKDLALI+HGSK++REHYLNTEEFIDAVA +L+ ++S Sbjct: 245 RFKDIFQEVYEAGWKSKYEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNATLLDFTEKLEAACIGVVESGKMTKDLALILHGSKLSREHYLNTEEFIDAVAAELKTKIS 432
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_MICOH (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus ochrogaster GN=IDH1 PE=3 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.299e-73 Identity = 130/189 (68.78%), Postives = 157/189 (83.07%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 566 + +D+FQE+Y+ +KS FEA IWYEHRLIDDMVA A+KSEGG++WACKNYDGDVQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRHYR+HQKG ETSTN IASIFAWSRGLAHRA+LDNN L F + LE CI T+E+G MTKDLA I G + R YLNT EF+D + ++L+A+L+ Sbjct: 222 RFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKLA 410
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_MICME (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Microtus mexicanus GN=IDH1 PE=2 SV=1) HSP 1 Score: 275.018 bits (702), Expect = 2.299e-73 Identity = 130/189 (68.78%), Postives = 157/189 (83.07%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 566 + +D+FQE+Y+ +KS FEA IWYEHRLIDDMVA A+KSEGG++WACKNYDGDVQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRHYR+HQKG ETSTN IASIFAWSRGLAHRA+LDNN L F + LE CI T+E+G MTKDLA I G + R YLNT EF+D + ++L+A+L+ Sbjct: 222 RFKDIFQEIYDKQYKSQFEAQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMHQKGQETSTNPIASIFAWSRGLAHRARLDNNTELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKLA 410
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_RAT (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Rattus norvegicus GN=Idh1 PE=1 SV=1) HSP 1 Score: 273.478 bits (698), Expect = 6.689e-73 Identity = 130/189 (68.78%), Postives = 156/189 (82.54%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 566 + +D+FQE+Y+ +KS FEA IWYEHRLIDDMVA A+KSEGG++WACKNYDGDVQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAWSRGLAHRAKLDNN L F LE CI T+E+G MTKDLA I G + R YLNT EF+D + ++L+A+L+ Sbjct: 222 RFKDIFQEIYDKQYKSKFEAQKIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFANALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKLA 410
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_SHEEP (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Ovis aries GN=IDH1 PE=2 SV=1) HSP 1 Score: 271.166 bits (692), Expect = 3.320e-72 Identity = 129/189 (68.25%), Postives = 156/189 (82.54%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 566 + +D+FQE+Y+ +KS FEA IWYEHRLIDDMVA A+KSEGG++WACKNYDGDVQSD +AQG+GSLG+MTSVLVCPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAW+RGLAHRAKLDNN L F + LE CI T+E+G MTKDLA I G + R YLNT EF+D + ++L+ +L+ Sbjct: 222 RFKDIFQEIYDKQYKSQFEAQNIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWTRGLAHRAKLDNNKELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLQLKLA 410
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_MOUSE (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Mus musculus GN=Idh1 PE=1 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.261e-71 Identity = 129/189 (68.25%), Postives = 156/189 (82.54%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 566 + +D+FQE+Y+ +KS FEA I YEHRLIDDMVA A+KSEGG++WACKNYDGDVQSD +AQG+GSLG+MTSVL+CPDGKT+EAEAAHGTVTRHYR++QKG ETSTN IASIFAWSRGLAHRAKLDNN L F + LE CI T+E+G MTKDLA I G + R YLNT EF+D + ++L+A+L+ Sbjct: 222 RFKDIFQEIYDKKYKSQFEAQNICYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLICPDGKTVEAEAAHGTVTRHYRMYQKGQETSTNPIASIFAWSRGLAHRAKLDNNTELSFFAKALEDVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLKAKLA 410
BLAST of CF835040 vs. ExPASy Swiss-Prot
Match: IDHC_BOVIN (Isocitrate dehydrogenase [NADP] cytoplasmic OS=Bos taurus GN=IDH1 PE=2 SV=1) HSP 1 Score: 268.855 bits (686), Expect = 1.648e-71 Identity = 128/189 (67.72%), Postives = 155/189 (82.01%), Query Frame = 3 Query: 3 KIQDLFQEVYEANWKSPFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHYRVHQKGGETSTNSIASIFAWSRGLAHRAKLDNNARLLDFTEKLEAACIGTVESGKMTKDLALIIHG-SKMTREHYLNTEEFIDAVADDLRARLS 566 + +D+FQE+Y+ +KS FEA IWYEHRLIDDMVA A+KSEGG++WACKNYDGDVQSD +AQG+GSLG+MTSVLVCPDGKT+EAEAAHGTVTRHYR++QKG ET TN IASIFAW+RGLAHRAKLDNN L F + LE CI T+E+G MTKDLA I G + R YLNT EF+D + ++L+ +L+ Sbjct: 222 RFKDIFQEIYDKQYKSEFEAQNIWYEHRLIDDMVAQAMKSEGGFIWACKNYDGDVQSDSVAQGYGSLGMMTSVLVCPDGKTVEAEAAHGTVTRHYRMYQKGQETLTNPIASIFAWTRGLAHRAKLDNNKELSFFAKALEEVCIETIEAGFMTKDLAACIKGLPNVQRSDYLNTFEFMDKLGENLQLKLA 410 The following BLAST results are available for this feature:
BLAST of CF835040 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 30
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835040 ID=CF835040; Name=CF835040; organism=Citrus sinensis; type=EST; length=648bpback to top |