CF835041

Overview
NameCF835041
Unique NameCF835041
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length670
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPH_CATRO (Peptidyl-prolyl cis-trans isomerase OS=Catharanthus roseus GN=PCKR1 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.093e-57
Identity = 108/131 (82.44%), Postives = 112/131 (85.50%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG G SGKPLHYK SSFHRVIPGFMCQ           GESIYG+KFADENF+KKHTGPGILSM NAGP TNGSQFF+CTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRT K VV+ DCGQLS
Sbjct:   42 GEKGTGRSGKPLHYKDSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFADENFIKKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTAKKVVVEDCGQLS 172          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPH_SOLLC (Peptidyl-prolyl cis-trans isomerase OS=Solanum lycopersicum GN=CYP PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.060e-56
Identity = 104/130 (80.00%), Postives = 111/130 (85.38%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GEKG+G  GKPLHYKGS+FHRVIPGFMCQ           GESIYG+KF DENFVKKHTGPGILSM NAGPGTNGSQFF+CTAKTEWL+GKHVVFGQVVEGMDV+K  E VGSSSGR +KPVVIADCGQL
Sbjct:   42 GEKGVGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGILSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPVVIADCGQL 171          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPH_LUPLU (Peptidyl-prolyl cis-trans isomerase OS=Lupinus luteus PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.628e-55
Identity = 98/131 (74.81%), Postives = 111/131 (84.73%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG+G SGKPLHYKGS+FHRVIP FMCQ            ESIYG+KFADENF+K+HTGPGILSM NAG GTNGSQFF+CT KTEWLDGKHVVFG+V+EGM+VV+ IEKVGS SG+T++PV IADCGQLS
Sbjct:   42 GEKGVGRSGKPLHYKGSTFHRVIPNFMCQGGDFTAGNGTGAESIYGAKFADENFIKRHTGPGILSMANAGAGTNGSQFFICTEKTEWLDGKHVVFGKVIEGMNVVRDIEKVGSGSGKTSRPVTIADCGQLS 172          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 8.657e-55
Identity = 103/131 (78.63%), Postives = 111/131 (84.73%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG+G+  KPLHYKGSSFHRVIPGFMCQ           GESIYG+KF DENF+KKHTGPG+LSM NAGPGTNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+AIEKVGS SG+T KPV IADCGQLS
Sbjct:   21 GEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQLS 150          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CP18C_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Arabidopsis thaliana GN=CYP18-3 PE=1 SV=1)

HSP 1 Score: 212.231 bits (539), Expect = 1.929e-54
Identity = 100/131 (76.34%), Postives = 109/131 (83.21%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG+G +GKPLH+KGS FHRVIP FMCQ           GESIYGSKF DENF +KHTGPGILSM NAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVVKAIEKVGSSSG+  KPVV+ADCGQLS
Sbjct:   42 GEKGVGGTGKPLHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTKPVVVADCGQLS 172          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CP19B_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Arabidopsis thaliana GN=CYP19-2 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.519e-54
Identity = 99/131 (75.57%), Postives = 110/131 (83.97%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG+G SGKPLH+KGSSFHRVIP FMCQ           GESIYG+KF DENF +KHTGPGILSM NAG  TNGSQFF+CT KT+WLDGKHVVFGQVVEG+DVVKAIEK+GSSSG+  KPVVIADCG++S
Sbjct:   43 GEKGVGRSGKPLHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGANTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTKPVVIADCGEIS 173          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CP19A_ARATH (Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Arabidopsis thaliana GN=CYP19-1 PE=1 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.519e-54
Identity = 101/131 (77.10%), Postives = 109/131 (83.21%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GE+GIG  GKPLHYKGSSFHRVIP FMCQ           GESIYGSKF DENF+KKHTGPGILSM NAG  TNGSQFF+CT KT WLDGKHVVFGQVVEG++VV+ IEKVGS SGRT+KPVVIADCGQ+S
Sbjct:   43 GERGIGKQGKPLHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGANTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGRTSKPVVIADCGQIS 173          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPH_BRANA (Peptidyl-prolyl cis-trans isomerase OS=Brassica napus GN=CYP PE=2 SV=2)

HSP 1 Score: 205.682 bits (522), Expect = 1.805e-52
Identity = 100/130 (76.92%), Postives = 105/130 (80.77%), Query Frame = -3
Query:  264 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 653
            GE+GIG SGKPLHYKGS+FHRVIP FMCQ           GESIYG KF DENFVKKHTGPGILSM NAG  TNGSQFF+CT KT WLDGKHVVFGQVVEGMDVV+ IEKVGS SGRT+K VV  DCGQL
Sbjct:   42 GERGIGKSGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSMRNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTCDCGQL 171          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CP18D_ARATH (Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Arabidopsis thaliana GN=CYP18-4 PE=1 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 4.021e-52
Identity = 97/131 (74.05%), Postives = 107/131 (81.68%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG+G  GKPLH+KGS FHRVIPGFMCQ           GESIYG+KF DENF+KKHTG GILSM N+GP TNGSQFF+CT KT WLDGKHVVFGQVV+G+DVVKAIEKVGS SG+T+K V I DCGQLS
Sbjct:   42 GEKGMGKLGKPLHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGPNTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGKTSKVVTITDCGQLS 172          
BLAST of CF835041 vs. ExPASy Swiss-Prot
Match: CYPH_MAIZE (Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN=CYP PE=2 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 6.420e-50
Identity = 94/131 (71.76%), Postives = 103/131 (78.63%), Query Frame = -3
Query:  261 GEKGIGNSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXGESIYGSKFADENFVKKHTGPGILSMGNAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCGQLS 653
            GEKG+G SGKPLHYKGS+FHRVIP FMCQ           GESIYG KF DE FV+K   PG+LSM NAGP TNGSQFF+CT  T WLDGKHVVFGQVVEGMDVVKAIEKVG+ +G T+K V +ADCGQLS
Sbjct:   42 GEKGVGKSGKPLHYKGSTFHRVIPEFMCQGGDFTRGNGTGGESIYGEKFPDEKFVRKQPAPGVLSMANAGPNTNGSQFFICTVATPWLDGKHVVFGQVVEGMDVVKAIEKVGTRNGSTSKVVKVADCGQLS 172          
The following BLAST results are available for this feature:
BLAST of CF835041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 205
Match NameE-valueIdentityDescription
CYPH_CATRO1.093e-5782.44Peptidyl-prolyl cis-trans isomerase OS=Catharanthu... [more]
CYPH_SOLLC2.060e-5680.00Peptidyl-prolyl cis-trans isomerase OS=Solanum lyc... [more]
CYPH_LUPLU6.628e-5574.81Peptidyl-prolyl cis-trans isomerase OS=Lupinus lut... [more]
CYPH_ALLCE8.657e-5578.63Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
CP18C_ARATH1.929e-5476.34Peptidyl-prolyl cis-trans isomerase CYP18-3 OS=Ara... [more]
CP19B_ARATH2.519e-5475.57Peptidyl-prolyl cis-trans isomerase CYP19-2 OS=Ara... [more]
CP19A_ARATH2.519e-5477.10Peptidyl-prolyl cis-trans isomerase CYP19-1 OS=Ara... [more]
CYPH_BRANA1.805e-5276.92Peptidyl-prolyl cis-trans isomerase OS=Brassica na... [more]
CP18D_ARATH4.021e-5274.05Peptidyl-prolyl cis-trans isomerase CYP18-4 OS=Ara... [more]
CYPH_MAIZE6.420e-5071.76Peptidyl-prolyl cis-trans isomerase OS=Zea mays GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06J06_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06J06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835041 ID=CF835041; Name=CF835041; organism=Citrus sinensis; type=EST; length=670bp
TTTTTTTTTTTTTTTTTACAAGACACAGCCCTATCTTATTTAAAACCGTG
TTAGCTCATAGAAAGACATAAAAAACAGGTTCATCAAGAACCACCACCCG
GAGACCCCGATCCAACCCGAACAAGTAACATAGCAGGGAAAATTAGATAA
AGATTAAAAGTCCTACAGACACGGCCACATAATAATAGATAACATAATCA
CCATCACGATCGCGATCAGACGGCTCGTGATGATGGCGATCATTATCATG
ATCAAATCTAAGACAATTGACCGCAATCAGCGATCACGACGGGCTTGTTG
GTCCTTCCGGAGCTGGACCCCACTTTCTCGATGGCCTTGACGACGTCCAT
TCCTTCGACGACTTGACCGAACACAACGTGCTTCCCATCGAGCCACTCGG
TCTTGGCCGTACAGACGAAGAACTGAGATCCGTTGGTTCCGGGTCCGGCA
TTCCCCATGGAGAGGATTCCGGGGCCGGTGTGCTTCTTCACGAAGTTCTC
ATCGGCGAATTTTGAGCCGTAGATTGATTCGCCTCCGGTTCCGTTTCCGG
CGGTGAAGTCTCCCCCCTGGCACATGAATCCGGGGATCACACGGTGGAAG
GACGAGCCCTTGTAGTGGAGTGGCTTGCCGGAATTGCCGATGCCTTTCTC
GCCCGGTGCAGAGGGCGCGG
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