CF835125

Overview
NameCF835125
Unique NameCF835125
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length389
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig906 contig Csv1_Contig906:755..1143. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835125 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSJ (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. japonica GN=Os09g0529100 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.839e-18
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 3
Query:    3 PPERFTFTFPVINSSAYLAMVVCGAGKSRAVQTALGNNQ-NSDLLPVQMALAEE-EFTWFLDKDATSKL 203
            PPER TFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA+ ++ EFTWF DK A S L
Sbjct:  253 PPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321          
BLAST of CF835125 vs. ExPASy Swiss-Prot
Match: 6PGL4_ORYSI (Probable 6-phosphogluconolactonase 4, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_031067 PE=3 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 2.839e-18
Identity = 48/69 (69.57%), Postives = 56/69 (81.16%), Query Frame = 3
Query:    3 PPERFTFTFPVINSSAYLAMVVCGAGKSRAVQTALGNNQ-NSDLLPVQMALAEE-EFTWFLDKDATSKL 203
            PPER TFTFPVINSSAY+AMVV GAGK+ AVQ AL + Q +SDLLPV+MA+ ++ EFTWF DK A S L
Sbjct:  253 PPERITFTFPVINSSAYVAMVVTGAGKAGAVQKALSDKQTSSDLLPVEMAVLQDGEFTWFTDKPAVSML 321          
BLAST of CF835125 vs. ExPASy Swiss-Prot
Match: 6PGL5_ARATH (Probable 6-phosphogluconolactonase 5, chloroplastic OS=Arabidopsis thaliana GN=EMB2024 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 3.248e-14
Identity = 38/67 (56.72%), Postives = 49/67 (73.13%), Query Frame = 3
Query:    3 PPERFTFTFPVINSSAYLAMVVCGAGKSRAVQTALGNNQNSDLLPVQMALAEEEFTWFLDKDATSKL 203
            P ER TFTFPVINSSA++A+VVCG+GK+ AV+ AL   +  ++ P     AE+E  WFLDK A+SKL
Sbjct:  261 PSERITFTFPVINSSAHVALVVCGSGKAEAVEAAL--KKTGNVPPAGSVSAEDELVWFLDKPASSKL 325          
BLAST of CF835125 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSJ (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os08g0547100 PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 5.540e-14
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 3
Query:    3 PPERFTFTFPVINSSAYLAMVVCGAGKSRAVQTALGNNQ-NSDLLPVQMALAEE-EFTWFLDKDATSKL 203
            PPER TFTFP++NSSA++A+VV GAGK+ AV  A  + Q +SDLLPV+M   +E   TWF DK A S L
Sbjct:  256 PPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324          
BLAST of CF835125 vs. ExPASy Swiss-Prot
Match: 6PGL3_ORYSI (Probable 6-phosphogluconolactonase 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_30141 PE=3 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 5.540e-14
Identity = 40/69 (57.97%), Postives = 50/69 (72.46%), Query Frame = 3
Query:    3 PPERFTFTFPVINSSAYLAMVVCGAGKSRAVQTALGNNQ-NSDLLPVQMALAEE-EFTWFLDKDATSKL 203
            PPER TFTFP++NSSA++A+VV GAGK+ AV  A  + Q +SDLLPV+M   +E   TWF DK A S L
Sbjct:  256 PPERITFTFPLVNSSAHIALVVTGAGKAGAVHKAFSDKQSSSDLLPVEMVSQQEGVLTWFTDKPAVSML 324          
The following BLAST results are available for this feature:
BLAST of CF835125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
6PGL4_ORYSJ2.839e-1869.57Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL4_ORYSI2.839e-1869.57Probable 6-phosphogluconolactonase 4, chloroplasti... [more]
6PGL5_ARATH3.248e-1456.72Probable 6-phosphogluconolactonase 5, chloroplasti... [more]
6PGL3_ORYSJ5.540e-1457.97Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
6PGL3_ORYSI5.540e-1457.97Probable 6-phosphogluconolactonase 3, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06L11_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835125 ID=CF835125; Name=CF835125; organism=Citrus sinensis; type=EST; length=389bp
CACCTCCAGAGCGATTCACTTTCACCTTCCCTGTAATCAACTCATCTGCA
TACCTTGCAATGGTGGTGTGTGGTGCTGGAAAATCAAGAGCAGTTCAAAC
TGCATTGGGTAATAATCAAAACTCTGATTTGCTGCCAGTTCAAATGGCAT
TGGCTGAAGAAGAATTCACTTGGTTTCTTGACAAAGACGCGACTTCAAAG
CTGTAAGAGTCAGAACAATTTGCTGTATGCATGAATCCCTGTTATCTGCT
ATGATAATTGGTTTGATCTGTGTGGTTTGACTACTAGTACTGCTGGATTT
TGTTAGTAATGAGAACAGAGTGAACTTGTTAATGCAAGTGAAAAAGATTT
GAATAAATATAGTTTGATATTTTAAAAAAAAAAAAAAAA
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