CF835126
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835126 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 121.324 bits (303), Expect = 3.836e-27 Identity = 53/88 (60.23%), Postives = 67/88 (76.14%), Query Frame = -1 Query: 344 PHYVAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDIFSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAGVAYESEIQL 607 PHY+AI +LYV G ND+LAVE+WQED +EW MRR FGAV D+ +PP G ++LRF V GSAG+ W+ + NAIP+DW AG Y+S I L Sbjct: 162 PHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAGATYDSNILL 249
BLAST of CF835126 vs. ExPASy Swiss-Prot
Match: EXPB1_ORYSJ (Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 3.854e-11 Identity = 34/91 (37.36%), Postives = 56/91 (61.54%), Query Frame = -1 Query: 341 PHYVAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDIFSPP--EGAISLRFQVSGSAGLTWVVANNAIPSDWKAGVAYESEIQLK 607 P+Y+A+ + YVAG DV+ VEI ++ +EW A++ ++GA++ I +P +G S+R G ++A +AIP WKA Y+S +Q K Sbjct: 180 PNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGGEK---IIAEDAIPDGWKADSVYKSNVQAK 267
BLAST of CF835126 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.033e-11 Identity = 33/95 (34.74%), Postives = 52/95 (54.74%), Query Frame = -1 Query: 341 SRYPHYVAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDIFSPPEGAISLRFQVSGSA---GLTWVVANNAIPSDWKAGVAYESEIQLK 616 S +P+Y+ I Y G D++AV++ + + R GAV+ SPP G +S+R S A G TW+V N +P +W AG Y+S +Q++ Sbjct: 160 SNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAGATYDSGVQVQ 254 The following BLAST results are available for this feature:
BLAST of CF835126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835126 ID=CF835126; Name=CF835126; organism=Citrus sinensis; type=EST; length=616bpback to top |