CF835127
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXLB1_ARATH (Expansin-like B1 OS=Arabidopsis thaliana GN=EXLB1 PE=2 SV=2) HSP 1 Score: 285.034 bits (728), Expect = 2.716e-76 Identity = 134/230 (58.26%), Postives = 163/230 (70.87%), Query Frame = 2 Query: 32 LSVMLLLPALCYSHYTSTYSRATYYGSPDSLGTPTGACGFGEYGRTVNDANVAGVS-RLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 + V++LLP LC S SRATYYGSPD P G CG+GE+GR +N+ V+GVS RLW NGTGCGACYQVRCK+P C TDFILSP+AYGRMA P +LYS+GVVNVE++R+PC Y GYNL +K+HE S PHYLAI +LYV G ND+LAVE+WQED +EW MRR FGAV D+ +PP G ++LRF V GSAG+ W+ + NAIP+DW AG Sbjct: 12 VQVIVLLPLLCLSD-DFVNSRATYYGSPDCKANPRGHCGYGEFGRDINNGEVSGVSWRLWNNGTGCGACYQVRCKIPPHCSEEGVYVVATDSGEGDGTDFILSPKAYGRMARPGTENQLYSFGVVNVEYQRIPCRYAGYNLVYKIHEKSYNPHYLAILVLYVGGVNDILAVEVWQEDCKEWRRMRRVFGAVHDLQNPPRGTLTLRFLVYGSAGINWIQSPNAIPADWTAG 240
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXLB1_ORYSJ (Expansin-like B1 OS=Oryza sativa subsp. japonica GN=EXLB1 PE=2 SV=2) HSP 1 Score: 166.392 bits (420), Expect = 1.408e-40 Identity = 91/234 (38.89%), Postives = 128/234 (54.70%), Query Frame = 2 Query: 29 LLSVMLLLPALCYSHYTSTYSRATYYGSPDSLGTPTGACGFGEYGRTVNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALP-DKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSA---GLTWVVANNAIPSDWKAG 718 +LS++L L + + T SRA YY + D GT GAC +G +G T+N+ +V+ + L+++G GCGACYQVRC P C TDFILS A+ RMA D L + GVV +E+RRV C Y N+ FK+ E+S +P+YL I Y G D++AV++ + + R GAV+ SPP G +S+R S A G TW+V N +P +W AG Sbjct: 12 ILSLILFL-SKATADANFTVSRAAYYPNSDIKGTENGACEYGAFGATLNNGDVSASASLYRDGVGCGACYQVRCTNPYYCSPNGVTIVITDSGASDGTDFILSQHAFTRMAQSTDAGTALLTLGVVGIEYRRVSCTYPNKNIVFKITESSNFPNYLEFEIWYQQGNQDIIAVQLCETVNLTCQLLSRTHGAVWAAVSPPSGPLSIRMLFSSGAPRGGDTWLVPTNIVPQNWTAG 244
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXLA2_ARATH (Expansin-like A2 OS=Arabidopsis thaliana GN=EXLA2 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.508e-34 Identity = 84/235 (35.74%), Postives = 128/235 (54.47%), Query Frame = 2 Query: 26 YLLSVMLLLPALCYSHYTSTYS-RATYYGSPDSLGTPTGACGFGEYGRTVNDANVAG-VSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPDKSAE--LYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 +LLSV+LL + + +S +A Y+ S +L + GAC +G ++A + ++K+G+GCGAC+QVRCK P LC +TD +LS RA+ MA P A+ L G+V++E+RRVPC Y + +V E+S+ P+YLAI +LY GQ +V+A+ I Q W M R+ GAV+ P GA+ RF V+ V + +P++W+AG Sbjct: 7 FLLSVVLLFSSSAAACDRCLHSSKAAYFSSASALSS--GACAYGSMATGFFAGHIAAALPSIYKDGSGCGACFQVRCKNPTLCSSKGTTVIVTDLNKTNQTDLVLSSRAFRAMAKPVVGADRDLLKQGIVDIEYRRVPCDYGNKKMNVRVEESSKNPNYLAIKLLYQGGQTEVVAIYIAQVGSSHWSYMTRSHGAVWVTDKVPNGALQFRFVVTAGYDGKMVWSQRVLPANWEAG 239
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXLA3_ARATH (Expansin-like A3 OS=Arabidopsis thaliana GN=EXLA3 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 9.774e-34 Identity = 76/213 (35.68%), Postives = 118/213 (55.40%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPTGACGFGEYGRTVNDANVAG-VSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPDKSAELY--SYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 S+A+Y+ S +L + GAC +G + ++A + ++K+G GCGAC+QVRCK P+LC +TD +LS RA+ MA P + Y G+V+VE++RVPC Y NL +V E S+ P+YLAI +LY GQ +V+ ++I +W M R+ GAV+ P GA+ +F V+G V + +P++W +G Sbjct: 28 SKASYFSSASALSS--GACAYGPMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCNSKGTIVMVTDLNTSNQTDLVLSSRAFRAMAKPVVGVDKYLLKQGIVDVEYQRVPCNYGKRNLNVRVEEASKKPNYLAIKLLYQGGQTEVVGIDIAPVGSSQWSYMSRSHGAVWATDKVPTGALQFKFTVTGGYDGKTVWSKRVLPANWNSG 238
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXLA1_ARATH (Expansin-like A1 OS=Arabidopsis thaliana GN=EXLA1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.276e-33 Identity = 78/214 (36.45%), Postives = 120/214 (56.07%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPTGACGFGEYGRTVNDANVAG-VSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPDKSAE--LYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQ-EDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVANNAIPSDWKAG 718 S+A Y+ S +L + GAC +G + ++A + ++K+G GCGAC+QVRCK P+LC +TD +LS RA+ MA P A+ L G+V++E++RVPC Y N+ +V E S+ P+YL I +LY GQ +V++++I Q W M R+ GAV+ P GAI RF V+G + + + +PS+W+AG Sbjct: 28 SKAAYFSSASALSS--GACAYGSMATSFFAGHIAAAIPSIYKDGAGCGACFQVRCKNPKLCSTKGTIVMITDLNKSNQTDLVLSSRAFRAMAKPIVGADKDLLKQGIVDIEYQRVPCDYGNKNMNVRVEEASKKPNYLEIKLLYQGGQTEVVSIDIAQVGSSPNWGYMTRSHGAVWVTDKVPTGAIQFRFVVTGGYDGKMIWSQSVLPSNWEAG 239
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXLA1_ORYSJ (Expansin-like A1 OS=Oryza sativa subsp. japonica GN=EXLA1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.274e-33 Identity = 79/213 (37.09%), Postives = 110/213 (51.64%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPTGACGFGEYGRTVNDAN--VAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVAN-NAIPSDWKAG 718 SRA YY S SL G+CG+G T N A L++ G GCGACYQVRCK +LC +T +LS A+ MA P +A L V+VE++RVPC Y+ +L +V E SR P+ L I+ LY GQ D++AV++ Q W M R G + +++ P G + +R V+G WV A+ +P W+AG Sbjct: 43 SRAAYYTS--SLTLTAGSCGYGTAAATFNGGGFLAAAGPALYRGGVGCGACYQVRCKDKKLCSNAGARVVVTDRARTNRTGLVLSSPAFAAMARPGMAASLTELAAVDVEYKRVPCEYRHRSLSVRVDERSRGPNELTISFLYQGGQTDIVAVDVAQVGSSSWKFMTREHGPSWSMANAPPGPLQMRLVVTGGYDGKWVWADREVLPRRWRAG 253
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXLA2_ORYSJ (Expansin-like A2 OS=Oryza sativa subsp. japonica GN=EXLA2 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 8.562e-30 Identity = 74/204 (36.27%), Postives = 105/204 (51.47%), Query Frame = 2 Query: 119 SLGTPTGACGFGEYGRTVNDANVAGVS-RLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXX-KTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYK-GYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVAN-NAIPSDWKAG 718 S+ G+CG+G + N ++A S L++ G GCGAC+QVRCK +LC +TD +LS AY MA P +A+L + V+VE++RVPC Y G NL +V E SR P L+I LY GQ D++AV++ W M R +G + + P G + R V+G WV A+ +P W AG Sbjct: 46 SIALNAGSCGYGSLAASFNGGHLAAASPALFRGGVGCGACFQVRCKDGKLCSTAGAKVVVTDEARSTNRTDLVLSAAAYAAMARPGMAAQLRTRRAVDVEYKRVPCEYAAGRNLSIRVEEKSRPPRELSIRFLYQGGQTDIVAVDVATVGSSNWKFMTRDYGPAWSTAQAPAGPLQFRVVVTGGYDGKWVWADGEVLPRRWTAG 249
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXLA3_ORYSJ (Expansin-like A3 OS=Oryza sativa subsp. japonica GN=EXLA3 PE=2 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.367e-27 Identity = 66/198 (33.33%), Postives = 98/198 (49.49%), Query Frame = 2 Query: 137 GACGFGEYGRTVNDAN---VAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKTDFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPPEGAISLRFQVSGSAGLTWVVAN-NAIPSDWKAG 718 G CG+G + AG R + G GCG C+Q+RC+ ++C TDF+L A+ +A P + +L ++VE+RR+PC YK NL V E S+ P+ L I LY GQ D+LAV++ Q +W M R +G V+ I P G + R V+G WV A+ +P++W+ G Sbjct: 53 GGCGYGAMAMEMELNGGFLAAGGPRQHRGGLGCGRCFQMRCRNAEVCSNAGVRVVLTDFHRSNSTDFLLGGPAFAGLAKPGMAHKLKKLDALSVEYRRIPCDYKDKNLSILVEEQSKRPNNLVIKFLYQGGQTDILAVDVAQVGSSDWRFMTRVYGPVWSIDRAPNGPLQFRAVVTGGYDGKWVWADREVLPANWQPG 250
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXPB1_ORYSJ (Expansin-B1 OS=Oryza sativa subsp. japonica GN=EXPB1a PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.511e-26 Identity = 71/217 (32.72%), Postives = 114/217 (52.53%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGRT-VNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKT--DFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYNLQFKVH-ENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPP--EGAISLRFQVSGSAGLTWVVANNAIPSDWKA 715 ++AT+YG+P G GACG+ + + N G ++K+G GCG+C++++C P+ C F LS A+G MA K EL G+++ +FRRV C Y + + H E + P+YLA+ + YVAG DV+ VEI ++ +EW A++ ++GA++ I +P +G S+R G ++A +AIP WKA Sbjct: 44 AKATWYGAPKGAGPKDNGGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEIKCSKPEACSDKPALIHVTDMNDEPIAAYHFDLSGLAFGAMAKDGKDEELRKAGIIDTQFRRVKCKYPA-DTKITFHIEKASNPNYLALLVKYVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEGGEK---IIAEDAIPDGWKA 256
BLAST of CF835127 vs. ExPASy Swiss-Prot
Match: EXB10_ORYSJ (Expansin-B10 OS=Oryza sativa subsp. japonica GN=EXPB10 PE=2 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 4.397e-26 Identity = 72/217 (33.18%), Postives = 110/217 (50.69%), Query Frame = 2 Query: 89 SRATYYGSPDSLGTPT--GACGFGEYGRT-VNDANVAGVSRLWKNGTGCGACYQVRCKVPQLCXXXXXXXXXXXXXXXXKT--DFILSPRAYGRMALPDKSAELYSYGVVNVEFRRVPCWYKGYN-LQFKVHENSRYPHYLAIAILYVAGQNDVLAVEIWQEDYQEWVAMRRAFGAVFDISSPP--EGAISLRFQVSGSAGLTWVVANNAIPSDWKA 715 +R T+YG P G GACG+ + + N G ++K+G GCG+C++V+C P+ C F LS A+G MA K EL G+++++FRRV C Y G + F V + S P+Y A+ + YV G DV+ VE+ ++ +EW + ++GA++ I +P +G SLR L VAN+ IP +WKA Sbjct: 44 ARGTWYGKPKGAGPDDNGGACGYKDIDKAPFLGMNSCGNDPIFKDGKGCGSCFEVKCSKPEACSDKPVIIHITDMNTEPIAAYHFDLSGHAFGAMAKEGKDEELRKAGIIDMQFRRVRCKYPGETKVTFHVEKGSN-PNYFAVLVKYVGGDGDVVKVELKEKGSEEWKPLNESWGAIWRIDTPKPLKGPFSLRVTTESDQKL---VANDVIPDNWKA 256 The following BLAST results are available for this feature:
BLAST of CF835127 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 74
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Sequences
The
following sequences are available for this feature:
EST sequence >CF835127 ID=CF835127; Name=CF835127; organism=Citrus sinensis; type=EST; length=725bpback to top |