CF835128

Overview
NameCF835128
Unique NameCF835128
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length658
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GANAB_DICDI (Neutral alpha-glucosidase AB OS=Dictyostelium discoideum GN=modA PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.692e-63
Identity = 114/219 (52.05%), Postives = 153/219 (69.86%), Query Frame = 2
Query:    2 ERATFFALKPTRGPNVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSYWL 658
            E  T  +LK T G  ++  +PYRL+NLDVFEY +D    LYG +P MISH    +T G FWLNAAE  +D+        +  + PSK+    T W+SE+GI+D F+  GP P  + +QY  +TG  ++P +FS+ YHQC+WNY+ E+DV+QVD+ FDE+ IPYDV+WLDIEHTDGK+YFTWD  +FP P +MQ  + AK R MVTIVDPHIKRD++Y++
Sbjct:  270 EHTTRLSLKSTTGNGINE-QPYRLYNLDVFEYEIDKTMALYGHVPLMISHDTK-KTVGVFWLNAAETFVDI-----EDVTTPVSPSKK----THWISESGIIDVFYLTGPTPSTIFKQYAYLTGTTALPQMFSLGYHQCKWNYKSEDDVKQVDNGFDENHIPYDVIWLDIEHTDGKRYFTWDNNNFPTPADMQNIIGAKHRKMVTIVDPHIKRDNNYYV 477          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GANC_MACFA (Neutral alpha-glucosidase C (Fragment) OS=Macaca fascicularis GN=GANC PE=2 SV=2)

HSP 1 Score: 235.728 bits (600), Expect = 1.584e-61
Identity = 110/214 (51.40%), Postives = 144/214 (67.29%), Query Frame = 2
Query:   44 NVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGIL--------LPSKQK---RIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSY 652
            N    + YRL+NLDV+ Y +    G+YGS+P++++H K GRT G FWLNA+E  +++     N E  +         + +KQK   R    WMSE+GI+D F   GP P DV +QY+ +TG  +MPPLFS+ YHQCRWNY DE+DV+ VD+ FDEHDIPYD +WLDIEHT+GK+YFTWD+  FP+PE MQ  L +K R +V I DPHIK D  Y
Sbjct:   94 NTGDEDAYRLYNLDVYGYQIYDKMGIYGSVPYLLAH-KLGRTIGIFWLNASETLVEI-----NTEPAVEYTLSQMGPVAAKQKVRSRTHVHWMSESGIIDVFLLTGPTPSDVFKQYSHLTGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKKRFPNPERMQELLRSKKRKLVVISDPHIKIDPDY 301          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GANC_MOUSE (Neutral alpha-glucosidase C OS=Mus musculus GN=Ganc PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.019e-61
Identity = 108/214 (50.47%), Postives = 141/214 (65.89%), Query Frame = 2
Query:   44 NVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGI-----------LLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSY 652
            N    + YRL+NLDV+ Y +    G+YGS+P++++H K GRT G FWLNA+E  +++     N E  +             P  + R D  WMSE+GI+D F   GP P DV +QY+ +TG  +MPPLFS+ YHQCRWNY DE+DV+ VD+ FDEHDIPYDV+WLDIEHT+ KKYFTWD+  F +P+ MQ  L +K R +V I DPHIK D  Y
Sbjct:  223 NTRDGDAYRLYNLDVYGYQVHDKMGIYGSVPYLLAH-KQGRTVGIFWLNASETLVEI-----NTEPAVEYTLTQMGPAAAKPKVRCRTDVHWMSESGIIDVFLLTGPTPADVFKQYSYITGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDVMWLDIEHTEDKKYFTWDKKRFANPKRMQELLRSKKRKLVVISDPHIKVDPDY 430          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GANC_HUMAN (Neutral alpha-glucosidase C OS=Homo sapiens GN=GANC PE=2 SV=2)

HSP 1 Score: 233.802 bits (595), Expect = 6.019e-61
Identity = 109/214 (50.93%), Postives = 144/214 (67.29%), Query Frame = 2
Query:   44 NVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGIL--------LPSKQK---RIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSY 652
            N    + YRL+NLDV+ Y +    G+YGS+P++++H K GRT G FWLNA+E  +++     N E  +         + +KQK   R    WMSE+GI+D F   GP P DV +QY+ +TG  +MPPLFS+ YHQCRWNY DE+DV+ VD+ FDEHDIPYD +WLDIEHT+GK+YFTWD+  FP+P+ MQ  L +K R +V I DPHIK D  Y
Sbjct:  239 NTGDGDAYRLYNLDVYGYQIYDKMGIYGSVPYLLAH-KLGRTIGIFWLNASETLVEI-----NTEPAVEYTLTQMGPVAAKQKVRSRTHVHWMSESGIIDVFLLTGPTPSDVFKQYSHLTGTQAMPPLFSLGYHQCRWNYEDEQDVKAVDAGFDEHDIPYDAMWLDIEHTEGKRYFTWDKNRFPNPKRMQELLRSKKRKLVVISDPHIKIDPDY 446          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GANAB_MACFA (Neutral alpha-glucosidase AB OS=Macaca fascicularis GN=GANAB PE=2 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 1.639e-58
Identity = 113/223 (50.67%), Postives = 141/223 (63.23%), Query Frame = 2
Query:    2 ERATFFALKPTRGPNVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGD-GWNAESGILLPSKQ-----KRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSY 652
            E A    LK T G      EPYRL+NLDVF+Y L +P  LYGS+P +++H    R  G FWLNAAE  +D+  +       G ++   Q      + D  WMSE GI+D F  +GP   DV RQY S+TG  ++PPLFS+ YHQ RWNYRDE DV +VD  FDEH++P DV+WLDIEH DGK+YFTWD   FP P  M  +L++K R +V IVDPHIK D  Y
Sbjct:  261 EHADNLRLKVTEG-----GEPYRLYNLDVFQYELYNPMALYGSVPVLLAHNPH-RDLGIFWLNAAETWVDISSNTAGKTLFGKMMDYLQGSGETPQTDVRWMSETGIIDVFLLLGPSISDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVDQGFDEHNLPCDVIWLDIEHADGKRYFTWDPSRFPQPRTMLERLASKRRKLVAIVDPHIKVDSGY 477          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GANAB_HUMAN (Neutral alpha-glucosidase AB OS=Homo sapiens GN=GANAB PE=1 SV=3)

HSP 1 Score: 224.557 bits (571), Expect = 3.652e-58
Identity = 112/223 (50.22%), Postives = 141/223 (63.23%), Query Frame = 2
Query:    2 ERATFFALKPTRGPNVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGD-GWNAESGILLPSKQ-----KRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSY 652
            E A    LK T G      EPYRL+NLDVF+Y L +P  LYGS+P +++H    R  G FWLNAAE  +D+  +       G ++   Q      + D  WMSE GI+D F  +GP   DV RQY S+TG  ++PPLFS+ YHQ RWNYRDE DV +VD  FD+H++P DV+WLDIEH DGK+YFTWD   FP P  M  +L++K R +V IVDPHIK D  Y
Sbjct:  261 EHADNLRLKVTEG-----GEPYRLYNLDVFQYELYNPMALYGSVPVLLAHNPH-RDLGIFWLNAAETWVDISSNTAGKTLFGKMMDYLQGSGETPQTDVRWMSETGIIDVFLLLGPSISDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVDQGFDDHNLPCDVIWLDIEHADGKRYFTWDPSRFPQPRTMLERLASKRRKLVAIVDPHIKVDSGY 477          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GANAB_MOUSE (Neutral alpha-glucosidase AB OS=Mus musculus GN=Ganab PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 6.229e-58
Identity = 113/223 (50.67%), Postives = 142/223 (63.68%), Query Frame = 2
Query:    2 ERATFFALKPTRGPNVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGD-GWNAESGILLPSKQ-----KRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSY 652
            E A    LK T G      EPYRL+NLDVF+Y L++P  LYGS+P +++H    R  G FWLNAAE  +D+  +       G +L   Q      + D  WMSE+GI+D F  +GP   DV RQY S+TG  ++PPLFS+ YHQ RWNYRDE DV +VD  FD+H++P DV+WLDIEH DGK+YFTWD   FP P  M   L++K R +V IVDPHIK D  Y
Sbjct:  261 EHADSLRLKVTEG-----GEPYRLYNLDVFQYELNNPMALYGSVPVLLAHSFH-RDLGIFWLNAAETWVDISSNTAGKTLFGKMLDYLQGSGETPQTDIRWMSESGIIDVFLMLGPSVFDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVDQGFDDHNMPCDVIWLDIEHADGKRYFTWDPTRFPQPLNMLEHLASKRRKLVAIVDPHIKVDSGY 477          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GLU2A_SCHPO (Glucosidase 2 subunit alpha OS=Schizosaccharomyces pombe GN=gls2 PE=2 SV=1)

HSP 1 Score: 223.016 bits (567), Expect = 1.062e-57
Identity = 107/220 (48.64%), Postives = 143/220 (65.00%), Query Frame = 2
Query:    2 ERATFFALKPTRGPNVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKR-IDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSYWL 658
            E  +  +LK T   +  ++EPYRL+N+D+FEY +DSP   YG+IPFM +H K       FW NAA   IDV       ESG   PS   +   T W SE+G +D F F+GP   DV   Y+++ G P +PPLFSI YHQCRWNY  EEDV  VD+KFDE D+PYD +WLDIE+   ++YFTWD+ +FP+P+ M  KL +K R ++ I+DPHIK D +Y++
Sbjct:  251 EHTSSLSLKETNNSDAGYTEPYRLYNVDLFEYEVDSPMSQYGAIPFMQAH-KPNSDVAVFWSNAAATWIDV-----EKESG---PSPHSQSTSTHWYSESGTLDLFIFLGPKASDVYESYSALVGRPLLPPLFSIGYHQCRWNYVSEEDVLNVDAKFDEVDMPYDTIWLDIEYASKRRYFTWDKATFPNPKAMLEKLDSKSRKLIVILDPHIKNDPNYFV 461          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GANAB_PIG (Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANAB PE=1 SV=1)

HSP 1 Score: 220.705 bits (561), Expect = 5.273e-57
Identity = 111/223 (49.78%), Postives = 141/223 (63.23%), Query Frame = 2
Query:    2 ERATFFALKPTRGPNVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGD-GWNAESGILLPSKQ-----KRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRDDSY 652
            E A    LK T G      +PYRL+NLDVF+Y L +P  LYGS+P +++H    R  G FWLNAAE  +D+  +       G +L   Q      + D  WMSE+GI+D F  +GP   DV RQY S+TG  ++PPLFS+ YHQ RWNYRDE DV +V+  FD+H++P D +WLDIEH DGK+YFTWD   FP P  M   L++K R +V IVDPHIK D SY
Sbjct:  261 EHADSLRLKVTEG-----GDPYRLYNLDVFQYELYNPMALYGSVPVLLAHSPH-RDLGIFWLNAAETWVDISSNTAGKTLFGKMLDYLQGSGETPQTDVRWMSESGIIDVFLLLGPSVFDVFRQYASLTGTQALPPLFSLGYHQSRWNYRDEADVLEVNQGFDDHNLPCDFIWLDIEHADGKRYFTWDPSRFPQPRTMLEHLASKRRKLVAIVDPHIKVDSSY 477          
BLAST of CF835128 vs. ExPASy Swiss-Prot
Match: GLU2A_YEAST (Glucosidase 2 subunit alpha OS=Saccharomyces cerevisiae GN=ROT2 PE=1 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 1.258e-50
Identity = 98/214 (45.79%), Postives = 135/214 (63.08%), Query Frame = 2
Query:    2 ERATFFALKPTRGPNVDHSEPYRLFNLDVFEYLLDSPFGLYGSIPFMISHGKSGRTSGFFWLNAAEMQIDVLGDGWNAESGILLPSKQKRIDTFWMSEAGIVDTFFFVGPGPKDVVRQYTSVTGMPSMPPLFSIAYHQCRWNYRDEEDVEQVDSKFDEHDIPYDVLWLDIEHTDGKKYFTWDRLSFPHPEEMQRKLSAKGRHMVTIVDPHIKRD 643
            E AT   L  T G      EPYRLFN+DVFEY + +   +YGSIPFM S      ++  FW+NAA+  +D+  D           SK K + T W+SE G++D    +GP    ++ ++T +TG P +PP+ SI YHQCRWNY DE DV  VDS+ D H IPYD +WLD+E+T+ KKYFTW + SFP+P+ +  KL   GR++V ++DPH+K+D
Sbjct:  276 EHATSLRLMDTSGGK----EPYRLFNVDVFEYNIGTSQPMYGSIPFMFSSS----STSIFWVNAADTWVDIKYD----------TSKNKTM-THWISENGVIDVVMSLGPDIPTIIDKFTDLTGRPFLPPISSIGYHQCRWNYNDEMDVLTVDSQMDAHMIPYDFIWLDLEYTNDKKYFTWKQHSFPNPKRLLSKLKKLGRNLVVLIDPHLKKD 470          
The following BLAST results are available for this feature:
BLAST of CF835128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 38
Match NameE-valueIdentityDescription
GANAB_DICDI1.692e-6352.05Neutral alpha-glucosidase AB OS=Dictyostelium disc... [more]
GANC_MACFA1.584e-6151.40Neutral alpha-glucosidase C (Fragment) OS=Macaca f... [more]
GANC_MOUSE6.019e-6150.47Neutral alpha-glucosidase C OS=Mus musculus GN=Gan... [more]
GANC_HUMAN6.019e-6150.93Neutral alpha-glucosidase C OS=Homo sapiens GN=GAN... [more]
GANAB_MACFA1.639e-5850.67Neutral alpha-glucosidase AB OS=Macaca fasciculari... [more]
GANAB_HUMAN3.652e-5850.22Neutral alpha-glucosidase AB OS=Homo sapiens GN=GA... [more]
GANAB_MOUSE6.229e-5850.67Neutral alpha-glucosidase AB OS=Mus musculus GN=Ga... [more]
GLU2A_SCHPO1.062e-5748.64Glucosidase 2 subunit alpha OS=Schizosaccharomyces... [more]
GANAB_PIG5.273e-5749.78Neutral alpha-glucosidase AB OS=Sus scrofa GN=GANA... [more]
GLU2A_YEAST1.258e-5045.79Glucosidase 2 subunit alpha OS=Saccharomyces cerev... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L13_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L13, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835128 ID=CF835128; Name=CF835128; organism=Citrus sinensis; type=EST; length=658bp
CGAACGTGCTACTTTTTTTGCTTTAAAACCAACTAGGGGGCCTAATGTGG
ACCATTCTGAACCTTATAGGTTGTTTAATTTGGATGTTTTTGAGTATCTT
CTTGACTCACCATTTGGGCTATATGGATCCATTCCGTTCATGATATCTCA
TGGGAAATCGGGAAGAACTTCTGGGTTCTTTTGGTTGAATGCTGCTGAGA
TGCAGATTGATGTATTGGGTGATGGTTGGAATGCGGAAAGTGGGATTTTG
TTGCCTTCTAAACAGAAGAGAATTGATACTTTTTGGATGAGTGAAGCTGG
GATTGTGGACACTTTCTTCTTTGTGGGTCCTGGTCCAAAAGATGTAGTGA
GGCAATATACAAGTGTCACTGGGATGCCATCTATGCCGCCGTTGTTTTCC
ATTGCGTATCACCAATGTAGGTGGAACTATAGGGATGAGGAGGATGTGGA
GCAAGTGGATTCCAAGTTCGATGAGCATGATATTCCTTATGATGTTTTGT
GGCTGGATATTGAACATACAGATGGCAAGAAGTATTTTACTTGGGATAGG
TTGTCGTTTCCACACCCGGAAGAGATGCAGAGAAAGTTGTCTGCCAAGGG
TAGGCATATGGTAACGATTGTGGATCCACATATTAAGAGGGATGATTCAT
ATTGGTTG
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