CF835140

Overview
NameCF835140
Unique NameCF835140
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length765
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 281.567 bits (719), Expect = 3.334e-75
Identity = 148/246 (60.16%), Postives = 183/246 (74.39%), Query Frame = 1
Query:   43 LLSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHD--CHKGERNLGEV-ESNG--ILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            LLSG+VTNQQTC D LV++KSG AA +  P+ N+TRLYS+SLGLV+HAL+RNL                  + +REPLETLIK +RK   +D  C K  RNLGE+ E++G  ILV+++VIV P  +DNFTTI DAIA +PNN++PEDGYF               P +KKNL+L+GDGIN+T+ITGNH+V+DGWTT+N S+FAV GERF+AVDVTF+NTAGP KHQAVALRNNA+ SSFYRCSFEG
Sbjct:  188 LLSGVVTNQQTCLDGLVEAKSGFAAAIGSPMGNLTRLYSISLGLVSHALNRNLKRFKASKGKILGG---GNSTYREPLETLIKGLRKTCDNDKDCRKTSRNLGELGETSGGSILVSKAVIVGPFKSDNFTTITDAIAAAPNNTRPEDGYFVIYAREGVYEEYIVVPINKKNLMLMGDGINKTIITGNHNVVDGWTTYNCSSFAVVGERFMAVDVTFRNTAGPEKHQAVALRNNAEGSSFYRCSFEG 430          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.982e-71
Identity = 145/247 (58.70%), Postives = 174/247 (70.45%), Query Frame = 1
Query:   43 LLSGIVTNQQTCFDELVDSKSGIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCH---DCHKGERNLGEV-ESNG--ILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            LL G+VTNQQTC D LVD+KSG A  +  PL N+TRLYSVSLGLV+HAL+RNL             F       REPLETLIK +RK  C    DC K  RNLGE+ E++G  ILV ++V V P+ TDNF TI +A+A +PN++ PE GYF                  K+N++LIGDGIN+T+I+GNHS IDGWTT+NSSTFAV G+RFVAVDVTF+NTAGP KHQAVA+RNNAD S+FYRCSFEG
Sbjct:  193 LLGGVVTNQQTCLDGLVDAKSGFATAIGTPLGNLTRLYSVSLGLVSHALNRNLKRYKGSKGKI---FGGGNKPVREPLETLIKVLRKT-CDKGKDCRKANRNLGELGETSGGSILVREAVTVGPYETDNFPTITEAVAAAPNHTFPEQGYFVIYARAGLYEEYVVISNKKRNIMLIGDGINKTIISGNHSFIDGWTTYNSSTFAVVGDRFVAVDVTFRNTAGPEKHQAVAVRNNADGSTFYRCSFEG 435          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 169.859 bits (429), Expect = 1.414e-41
Identity = 103/256 (40.23%), Postives = 145/256 (56.64%), Query Frame = 1
Query:   31 ESRPLLSGIVTNQQTCFDELVDSKSGIAAV---LYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXW-FLKNTNRFREP--------LETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            E + LLS  +TN+QTC D +  + S    +   +  PL N T+L+SVSL L T    +              W   KNT+   +P        L   + +  +A      + +    + + N +LV+  V V+ +GT NFTTI +A+  +PN +    GYF                K+K+ L++IGDGINRTV+TGN +V+DGWTTFNS+TFAV+   FVAV++TF+NTAGP KHQAVA+R++ADLS FY CSFE
Sbjct:  134 EIQTLLSAALTNEQTCLDGINTAASSSWTIRNGVALPLINDTKLFSVSLALFT----KGWVPKKKKQVASYSWAHPKNTHSHTKPFRHFRNGALPLKMTEHTRAVYESLSRRKLADDDNDVNTVLVSDIVTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVYEENVVIAKNKRYLMMIGDGINRTVVTGNRNVVDGWTTFNSATFAVTSPNFVAVNMTFRNTAGPEKHQAVAMRSSADLSIFYSCSFE 385          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.323e-39
Identity = 104/257 (40.47%), Postives = 138/257 (53.70%), Query Frame = 1
Query:   43 LLSGIVTNQQTCFDELVDSKSGIAAVLYE-----PLSNVTRLYSVSLGLVTHA-LDRNLXXXXXXXXXXXXWFLKNTNRFR----EPLETLIKDIRKAPCHDCHKGERNLGEVESNG-------ILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            LLS  +TN+QTC + L  + S  A          PL N T+L  VSL L T   + +                  +T  FR      L   + +  KA      +  R L + +SNG       +L++  V VS  GT NFT I  A+A +PNN+    G+F                K+K+ +++IGDGIN+TV+TGN SV+DGWTTFNS+TFAV+   FVAV++TF+NTAGP KHQAVALR+ AD S FY CSFE
Sbjct:  137 LLSAALTNEQTCLEGLTTAASYSATWTVRTGVALPLVNDTKLLGVSLALFTKGWVPKKKKRAGFAWAQPRSGSSTHTKPFRLFRNGALPLKMTEKTKAVYESLSR--RKLADGDSNGDGDDGSMVLISDIVTVSQDGTGNFTNITAAVAAAPNNTDGSAGFFLIYVTAGIYEEYISIAKNKRYMMMIGDGINQTVVTGNRSVVDGWTTFNSATFAVTAPNFVAVNITFRNTAGPEKHQAVALRSGADFSIFYSCSFE 391          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME20_ARATH (Probable pectinesterase/pectinesterase inhibitor 20 OS=Arabidopsis thaliana GN=PME20 PE=2 SV=2)

HSP 1 Score: 159.458 bits (402), Expect = 1.911e-38
Identity = 99/252 (39.29%), Postives = 137/252 (54.37%), Query Frame = 1
Query:   46 LSGIVTNQQTCFDELVD--SKSGIAAVLYEPLSNVTRLYSVSLGLVTHAL---DRNLXXXXXXXXXXXXWF--------LKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            LS  +TN+QTC + L    S++G++  L+    N T+LY VSL L +       +              +F        LK T R R    T+ +              R L + +++ + V+  V V  +GT NFTTI  AIA +PN +   +GYF               PK+K+ +++IGDGIN+TVITGN SV+DGWTTFNS+TF +SG  F+ V++T +NTAGP K QAVALR+  DLS FY CSFE
Sbjct:  139 LSAAITNEQTCLEGLKSTASENGLSGDLF----NDTKLYGVSLALFSKGWVPRRQRSRPIWQPQARFKKFFGFRNGKLPLKMTERARAVYNTVTR--------------RKLLQSDADAVQVSDIVTVIQNGTGNFTTINAAIAAAPNKTDGSNGYFLIYVTAGLYEEYVEVPKNKRYVMMIGDGINQTVITGNRSVVDGWTTFNSATFILSGPNFIGVNITIRNTAGPTKGQAVALRSGGDLSVFYSCSFE 372          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME32_ARATH (Probable pectinesterase/pectinesterase inhibitor 32 OS=Arabidopsis thaliana GN=PME32 PE=2 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.279e-30
Identity = 69/146 (47.26%), Postives = 94/146 (64.38%), Query Frame = 1
Query:  328 GERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            G+R L  ++++ I V  +V+ +  GT NFTTI DA+  +P+ S      +                K K N++++GDGI+ TVITGN S IDGWTTF S+TFAVSG  F+A D+TF+NTAGP KHQAVA+R++ DL  FYRC+  G
Sbjct:  200 GDRKL--LQTDNITVADAVVAAD-GTGNFTTISDAVLAAPDYSTKR---YVIHVKRGVYVENVEIKKKKWNIMMVGDGIDATVITGNRSFIDGWTTFRSATFAVSGRGFIARDITFQNTAGPEKHQAVAIRSDTDLGVFYRCAMRG 339          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.718e-29
Identity = 65/139 (46.76%), Postives = 92/139 (66.19%), Query Frame = 1
Query:  349 VESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            ++++G+ V+   IV+  GT NFT + DA+  +P+ S      +                K K NL++IGDG++ T+I+GN S +DGWTTF S+TFAVSG  F+A D+TF+NTAGP KHQAVALR+++DLS FYRC+  G
Sbjct:  200 LQADGVSVD--AIVAQDGTGNFTNVTDAVLAAPDYSMRR---YVIYIKRGTYKENVEIKKKKWNLMMIGDGMDATIISGNRSFVDGWTTFRSATFAVSGRGFIARDITFENTAGPEKHQAVALRSDSDLSVFYRCNIRG 333          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.373e-28
Identity = 70/139 (50.36%), Postives = 90/139 (64.75%), Query Frame = 1
Query:  349 VESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            +ESNG   + SV +   GT NFT I DAI  +P+ S      F                K K N++++GDGI+ TVI+GN S IDGWTTF S+TFAVSG  F+A D+TF+NTAGP KHQAVALR+++DLS F+RC+  G
Sbjct:  204 LESNGRTYDVSVALD--GTGNFTKIMDAIKKAPDYSSTR---FVIYIKKGLYLENVEIKKKKWNIVMLGDGIDVTVISGNRSFIDGWTTFRSATFAVSGRGFLARDITFQNTAGPEKHQAVALRSDSDLSVFFRCAMRG 337          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.793e-28
Identity = 85/252 (33.73%), Postives = 124/252 (49.21%), Query Frame = 1
Query:   43 LLSGIVTNQQTCFDELVDSKS------------GIAAVLYEPLSNVTRLYSVSLGLVTHALDRNLXXXXXXXXXXXXWFLKNTNRFREPLETLIKDIRKAPCHDCHKGERNLGEVESNGILVNQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFE 762
            LLS  +TN +TC D    S +            G+A  L E L N++   S SL ++ + +  ++            W   +                          +RNL +   +   VN  ++V+ +GT N+TTIG+AI+ +PN+S+     F               P+ K  ++ IGDGI RTVI  N S  DGWT F+S+T  V G  F+A D++F N AGP KHQAVALR+++DLS++YRCSFE
Sbjct:  112 LLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLEN-IPGHIPGKVKEDVGFPMWVSGS--------------------------DRNLLQDPVDETKVN--LVVAQNGTGNYTTIGEAISAAPNSSETR---FVIYIKCGEYFENIEIPREKTMIMFIGDGIGRTVIKANRSYADGWTAFHSATVGVRGSGFIAKDLSFVNYAGPEKHQAVALRSSSDLSAYYRCSFE 331          
BLAST of CF835140 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.518e-27
Identity = 65/131 (49.62%), Postives = 83/131 (63.36%), Query Frame = 1
Query:  373 NQSVIVSPHGTDNFTTIGDAIAFSPNNSKPEDGYFXXXXXXXXXXXXXXXPKHKKNLLLIGDGINRTVITGNHSVIDGWTTFNSSTFAVSGERFVAVDVTFKNTAGPAKHQAVALRNNADLSSFYRCSFEG 765
            ++S++V+  GT NF+TI +AI+F+PN S                      P +K N++LIGDG + T ITGN SV DGWTTF S+T AVSGE F+A D+   NTAGP KHQAVALR NAD  + YRC  +G
Sbjct:  235 SESLVVAADGTGNFSTINEAISFAPNMSNDR---VLIYVKEGVYDENIDIPIYKTNIVLIGDGSDVTFITGNRSVGDGWTTFRSATLAVSGEGFLARDIMITNTAGPEKHQAVALRVNADFVALYRCVIDG 362          
The following BLAST results are available for this feature:
BLAST of CF835140 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 63
Match NameE-valueIdentityDescription
PME25_ARATH3.334e-7560.16Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME47_ARATH4.982e-7158.70Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME41_ARATH1.414e-4140.23Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME7_ARATH1.323e-3940.47Probable pectinesterase/pectinesterase inhibitor 7... [more]
PME20_ARATH1.911e-3839.29Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME32_ARATH7.279e-3047.26Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME_PRUPE4.718e-2946.76Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME44_ARATH1.373e-2850.36Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME40_ARATH1.793e-2833.73Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME12_ARATH1.518e-2749.62Probable pectinesterase/pectinesterase inhibitor 1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06L22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06L22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835140 ID=CF835140; Name=CF835140; organism=Citrus sinensis; type=EST; length=765bp
CTGAGTCGATGACGGATGAATTCGTGGACAGAGTCACGACCTCTGCTGAG
TGGGATCGTCACGAATCAGCAGACTTGCTTTGACGAGCTTGTGGATTCGA
AGAGCGGCATTGCTGCTGTGCTGTATGAGCCGCTGTCGAATGTGACTCGT
TTGTACAGTGTTTCGCTTGGGCTCGTGACCCACGCACTGGACCGGAATTT
GAGGCGGAATAAGAAGCGAAGCAAACGGTCCAAGAATTGGTTTTTGAAGA
ACACGAACCGGTTTCGTGAACCGCTCGAGACTCTTATCAAGGATATAAGA
AAGGCACCTTGCCATGATTGCCACAAAGGAGAAAGAAATCTTGGTGAAGT
GGAGAGCAATGGAATTCTTGTAAACCAAAGTGTGATAGTGAGCCCACATG
GGACTGATAATTTCACAACAATCGGGGATGCCATTGCATTTTCTCCCAAT
AACTCCAAGCCCGAAGATGGGTATTTTGTTATCTATGCACGAGAAGCTGT
TTACGAAGAATACGTGGTTGTTCCTAAGCATAAGAAGAATCTCTTGCTCA
TTGGTGATGGCATCAATCGGACTGTCATTACTGGAAATCACAGTGTCATT
GATGGCTGGACTACTTTCAATTCTTCAACTTTCGCTGTTTCTGGTGAGAG
ATTTGTAGCGGTAGATGTTACATTTAAGAACACAGCTGGTCCTGCAAAGC
ACCAAGCAGTAGCTCTGAGGAACAATGCTGATCTCTCATCATTCTACCGT
TGCAGTTTTGAAGGC
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