CF835155

Overview
NameCF835155
Unique NameCF835155
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length346
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1498 contig Csv1_Contig1498:79..424. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKA_FLABI (Nucleoside diphosphate kinase A OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.189e-38
Identity = 78/97 (80.41%), Postives = 84/97 (86.60%), Query Frame = 3
Query:   54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344
            MEQTFIMIKPDGVQ GLVGEII  FEKKGFSLKGLKL+TVDR FA+KHY DLSSKPFF   +EYI SGPVVAM+ EG+ VV TGR IIGATNPA+SA
Sbjct:    1 MEQTFIMIKPDGVQSGLVGEIIGRFEKKGFSLKGLKLLTVDRAFAEKHYADLSSKPFFNGLVEYIVSGPVVAMVWEGKNVVTTGREIIGATNPAESA 97          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK1_TOBAC (Nucleoside diphosphate kinase 1 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 3.189e-38
Identity = 77/97 (79.38%), Postives = 85/97 (87.63%), Query Frame = 3
Query:   54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344
            MEQTFIMIKPDGVQRGLVGEII  FEKKGFSLKGLKL+TVDR FA+KHY DLS+KPFF   ++YI SGPVVAM+ EG+GVV TGR IIGATNP +SA
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYSDLSAKPFFNGLVDYIISGPVVAMVWEGKGVVTTGRKIIGATNPLESA 97          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_CAPAN (Nucleoside diphosphate kinase OS=Capsicum annuum PE=2 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 7.105e-38
Identity = 76/97 (78.35%), Postives = 85/97 (87.63%), Query Frame = 3
Query:   54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344
            MEQTFIMIKPDGVQRGLVGEII  FEKKGFSLKGLKL+TVDR FA+KHY DLS+KPFF   +EYI SGPVV+M+ EG+GV+ TGR IIGATNP +SA
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVSMVWEGKGVLTTGRKIIGATNPLESA 97          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK1_SOYBN (Nucleoside diphosphate kinase 1 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 155.221 bits (391), Expect = 9.279e-38
Identity = 76/95 (80.00%), Postives = 83/95 (87.37%), Query Frame = 3
Query:   57 EQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341
            EQTFIMIKPDGVQRGL+GEII  FEKKGF LKGLKL+TVDRPFA+KHY DLS+KPFF   ++YI SGPVVAMI EG+ VV TGR IIGATNPAQS
Sbjct:    3 EQTFIMIKPDGVQRGLIGEIISRFEKKGFYLKGLKLVTVDRPFAEKHYADLSAKPFFSGLVDYIISGPVVAMIWEGKNVVTTGRKIIGATNPAQS 97          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDKB_FLABI (Nucleoside diphosphate kinase B OS=Flaveria bidentis PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 2.067e-37
Identity = 76/97 (78.35%), Postives = 84/97 (86.60%), Query Frame = 3
Query:   54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344
            ME TFIMIKPDGVQRGLVGEII  FEKKGFSLKGLKL+TVD+ FA+KHY DLS+KPFF   +EYI SGPVVAM+ EG+ VV TGR IIGATNPA+SA
Sbjct:    1 MEHTFIMIKPDGVQRGLVGEIIGRFEKKGFSLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAESA 97          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_HELAN (Nucleoside diphosphate kinase OS=Helianthus annuus PE=2 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 3.526e-37
Identity = 75/96 (78.12%), Postives = 84/96 (87.50%), Query Frame = 3
Query:   54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341
            MEQTFIMIKPDGVQRGLVGEII  FEKKGF+LKGLKL+TVD+ FA+KHY DLS+KPFF   +EYI SGPVVAM+ EG+ VV TGR IIGATNPA+S
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIIGRFEKKGFTLKGLKLLTVDQAFAEKHYADLSAKPFFNGLVEYIISGPVVAMVWEGKNVVTTGRKIIGATNPAES 96          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK1_MESCR (Nucleoside diphosphate kinase 1 OS=Mesembryanthemum crystallinum GN=NDKP1 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 7.855e-37
Identity = 75/96 (78.12%), Postives = 81/96 (84.38%), Query Frame = 3
Query:   54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341
            MEQTFIMIKPDGVQRGLVGEII  FEKKGFSLK LK + VDRPFA+KHY DLS+KPFF   +EYI SGPVVAM+ EG+GVV TGR IIGATNP  S
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFINVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVLTGRKIIGATNPLAS 96          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK1_SPIOL (Nucleoside diphosphate kinase 1 OS=Spinacia oleracea GN=NDPK1 PE=2 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 1.026e-36
Identity = 74/96 (77.08%), Postives = 81/96 (84.38%), Query Frame = 3
Query:   54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341
            MEQTFIMIKPDGVQRGLVGEII  FEKKGFSLK LK + VDRPFA+KHY DLS+KPFF   +EYI SGPVVAM+ EG+GVV TGR +IGATNP  S
Sbjct:    1 MEQTFIMIKPDGVQRGLVGEIISRFEKKGFSLKALKFVNVDRPFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKLIGATNPLAS 96          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK_SOLLC (Nucleoside diphosphate kinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 2.985e-36
Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = 3
Query:   66 FIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQSA 344
            FIMIKPDGVQRGLVGEII  FEKKGFSLKGLKL+TVDR FA+KHY DLS+KPFF   +EYI SGPVVAM+ EG+GVV TGR IIGATNP +SA
Sbjct:    1 FIMIKPDGVQRGLVGEIISRFEKKGFSLKGLKLITVDRAFAEKHYADLSAKPFFNGLVEYIVSGPVVAMVWEGKGVVATGRKIIGATNPLESA 93          
BLAST of CF835155 vs. ExPASy Swiss-Prot
Match: NDK1_ARATH (Nucleoside diphosphate kinase 1 OS=Arabidopsis thaliana GN=NDPK1 PE=1 SV=1)

HSP 1 Score: 149.443 bits (376), Expect = 5.092e-36
Identity = 73/96 (76.04%), Postives = 83/96 (86.46%), Query Frame = 3
Query:   54 MEQTFIMIKPDGVQRGLVGEIIITFEKKGFSLKGLKLMTVDRPFADKHYEDLSSKPFFGSQIEYITSGPVVAMIGEGEGVVNTGRTIIGATNPAQS 341
            MEQTFIMIKPDGVQRGL+GE+I  FEKKGF+LKGLKL++V+R FA+KHYEDLSSK FF   ++YI SGPVVAMI EG+ VV TGR IIGATNPA S
Sbjct:    1 MEQTFIMIKPDGVQRGLIGEVICRFEKKGFTLKGLKLISVERSFAEKHYEDLSSKSFFSGLVDYIVSGPVVAMIWEGKNVVLTGRKIIGATNPAAS 96          
The following BLAST results are available for this feature:
BLAST of CF835155 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
NDKA_FLABI3.189e-3880.41Nucleoside diphosphate kinase A OS=Flaveria bident... [more]
NDK1_TOBAC3.189e-3879.38Nucleoside diphosphate kinase 1 OS=Nicotiana tabac... [more]
NDK_CAPAN7.105e-3878.35Nucleoside diphosphate kinase OS=Capsicum annuum P... [more]
NDK1_SOYBN9.279e-3880.00Nucleoside diphosphate kinase 1 OS=Glycine max PE=... [more]
NDKB_FLABI2.067e-3778.35Nucleoside diphosphate kinase B OS=Flaveria bident... [more]
NDK_HELAN3.526e-3778.13Nucleoside diphosphate kinase OS=Helianthus annuus... [more]
NDK1_MESCR7.855e-3778.13Nucleoside diphosphate kinase 1 OS=Mesembryanthemu... [more]
NDK1_SPIOL1.026e-3677.08Nucleoside diphosphate kinase 1 OS=Spinacia olerac... [more]
NDK_SOLLC2.985e-3679.57Nucleoside diphosphate kinase (Fragment) OS=Solanu... [more]
NDK1_ARATH5.092e-3676.04Nucleoside diphosphate kinase 1 OS=Arabidopsis tha... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06M07_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06M07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835155 ID=CF835155; Name=CF835155; organism=Citrus sinensis; type=EST; length=346bp
GTGATATTTCACTCAATTCTCAAAACAAGTTGGTTTCTCTGAATCTCAAA
GAAATGGAACAAACTTTCATCATGATCAAGCCCGATGGGGTCCAAAGAGG
CCTTGTTGGTGAAATCATCATCACATTTGAGAAGAAGGGTTTCTCCTTGA
AGGGTTTGAAGCTTATGACTGTGGACCGCCCTTTTGCTGACAAGCACTAT
GAGGATTTGTCATCGAAGCCTTTCTTTGGCTCTCAGATTGAGTACATTAC
CTCTGGACCTGTTGTTGCTATGATTGGGGAGGGTGAAGGTGTTGTTAACA
CTGGCCGCACTATTATTGGAGCCACCAACCCTGCACAATCTGCTCC
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