CF835200

Overview
NameCF835200
Unique NameCF835200
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length506
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1403 contig Csv1_Contig1403:489..994. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF835200 vs. ExPASy Swiss-Prot
Match: METL5_MOUSE (Methyltransferase-like protein 5 OS=Mus musculus GN=Mettl5 PE=2 SV=2)

HSP 1 Score: 80.8777 bits (198), Expect = 3.768e-15
Identity = 43/75 (57.33%), Postives = 51/75 (68.00%), Query Frame = -2 
Query:  281 KGVDMDFLSMALKVASQAVYSLHKGFPREHVKKAALGDFNASSAEVLCELRYDVPQLYKFHKKKEVDIAVDLWRF 505
            KG DM FL  AL +A  AVYSLHK   REH++K A  ++     E++ ELRYD+P LY FHKKK VDI VDL RF
Sbjct:  135 KGTDMAFLKTALGMARTAVYSLHKSSTREHIQKKA-AEWKVK-IEIIAELRYDLPALYNFHKKKSVDIEVDLIRF 207
[Close]
BLAST of CF835200 vs. ExPASy Swiss-Prot
Match: METL5_HUMAN (Methyltransferase-like protein 5 OS=Homo sapiens GN=METTL5 PE=1 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 4.922e-15
Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = -2 
Query:  281 KGVDMDFLSMALKVASQAVYSLHKGFPREHVKKAALGDFNASSAEVLCELRYDVPQLYKFHKKKEVDIAVDLWRF 505
            KG DM FL  AL++A  AVYSLHK   REHV+K A  ++     +++ ELRYD+P  YKFHKKK VDI VDL RF
Sbjct:  135 KGTDMAFLKTALEMARTAVYSLHKSSTREHVQKKA-AEWKIK-IDIIAELRYDLPASYKFHKKKSVDIEVDLIRF 207
The following BLAST results are available for this feature:
BLAST of CF835200 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
METL5_MOUSE3.768e-1557.33Methyltransferase-like protein 5 OS=Mus musculus G... [more]
METL5_HUMAN4.922e-1557.33Methyltransferase-like protein 5 OS=Homo sapiens G... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06N10_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835200 ID=CF835200; Name=CF835200; organism=Citrus sinensis; type=EST; length=506bp
ATATTTCTTTCAAACCCTTTATTTCCCTAAATGATAAAAGAAAAATGCCT
GGGAACTCTCGTCAATTGCATCAGGCATACAAGTGCTTCAGTCTTTCGCA
AAGTTCCTTTCCATAAATGATAAAAGAAAAATGCCTGGGAATTCTCGTCA
ATTGCATCAGGCATACAAGGGCTTCAGGCTTTCACATGTATATTCATTAT
GACACCCTGGGCATACTCCTGATACAAGCATACTCCCGACACAAGTGTTA
AATACCCCTTCCCAGATTTCTTTTGGGCACAAATCGCCAAAGATCCACAG
CAATATCCACCTCCTTTTTCTTATGAAATTTGTATAGTTGGGGAACATCA
TATCGAAGCTCACACAACACCTCAGCACTACTAGCATTGAAGTCTCCGAG
TGCTGCCTTTTTCACATGTTCTCTTGGAAACCCCTTATGCAAGGAATAAA
CTGCTTGAGAAGCAACCTTCAAAGCCATAGAGAGAAAATCCATGTCAACC
CCCTTT
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