CF835215

Overview
NameCF835215
Unique NameCF835215
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length669
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71D9_SOYBN (Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=2 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.830e-56
Identity = 98/149 (65.77%), Postives = 118/149 (79.19%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYH 449
            K+ +  V ETLRLHP APLLLPRECG+ C+ING+ IP K++V VNAWAIGRDP+ WTE   F PERF++ SI+YK  +FEFIPFGAGRR+CPG++FGL++VE  LAML+YHFDWKLP G K+EDL MTE F  TV RK DL +IP   H
Sbjct:  347 KYLKSVVSETLRLHPPAPLLLPRECGQACEINGYHIPAKSRVIVNAWAIGRDPRLWTEAERFYPERFIERSIEYKSNSFEFIPFGAGRRMCPGLTFGLSNVEYVLAMLMYHFDWKLPKGTKNEDLGMTEIFGITVARKDDLYLIPKTVH 495          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71DA_SOYBN (Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 PE=2 SV=1)

HSP 1 Score: 213.772 bits (543), Expect = 6.628e-55
Identity = 95/149 (63.76%), Postives = 121/149 (81.21%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHP 452
            + +  +KET+RLHP  PLL+PR   ERCQING++IP K ++ +NAWAIGR+PK W E  SF PERFL+ SID++GT+FEFIPFGAGRRICPG++F + ++ELPLA LLYHFDWKLPN MK+E+LDMTE+   T+RR+ DLC+IPI   P
Sbjct:  362 YLKSIIKETMRLHPPVPLLVPRVSRERCQINGYEIPSKTRIIINAWAIGRNPKYWGETESFKPERFLNSSIDFRGTDFEFIPFGAGRRICPGITFAIPNIELPLAQLLYHFDWKLPNKMKNEELDMTESNGITLRRQNDLCLIPITRLP 510          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71DB_LOTJA (Cytochrome P450 71D11 (Fragment) OS=Lotus japonicus GN=CYP71D11 PE=2 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 6.859e-52
Identity = 92/150 (61.33%), Postives = 115/150 (76.67%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHP 452
            K+ +  + E LRLHP  PL+  REC + C+ING+ IP K+ V VN +AIG D K W EP  F PERF+D SIDYKGTNFE +PFGAGRRICPG+++G+A+VEL LA+LLYHFDW LP G+K+EDLD+TE F  TV +K+DLC+IP   HP
Sbjct:  338 KYLKAFINEVLRLHPPGPLVF-RECRQACEINGYHIPAKSTVLVNTFAIGTDSKYWAEPERFCPERFIDSSIDYKGTNFEHLPFGAGRRICPGINYGMANVELVLALLLYHFDWTLPKGIKNEDLDLTEEFGVTVSKKEDLCLIPSISHP 486          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71D7_SOLCH (Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71D7 PE=3 SV=1)

HSP 1 Score: 202.986 bits (515), Expect = 1.170e-51
Identity = 93/150 (62.00%), Postives = 113/150 (75.33%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHP 452
            K+ +L +KET+RLH   PLL+PREC E  +ING+ IPVK KV VN WA+GRDPK W +  SF PERF   SID+ G NFE++PFG GRRICPG+SFGLA+V LPLA LLYHFDWKLP GM+ +DLD+TE+   T  RK DL +I  P+ P
Sbjct:  351 KYLKLVIKETMRLHAPVPLLVPRECREETEINGYTIPVKTKVMVNVWALGRDPKYWDDAESFKPERFEQCSIDFIGNNFEYLPFGGGRRICPGISFGLANVYLPLAQLLYHFDWKLPTGMEPKDLDLTESAGITAARKGDLYLIATPHQP 500          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71D8_SOYBN (Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=2 SV=1)

HSP 1 Score: 194.897 bits (494), Expect = 3.186e-49
Identity = 91/150 (60.67%), Postives = 114/150 (76.00%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHPS 455
            + +  +KETLRLHP + L+ PREC     I+G++IP+K KV +N WAIGRDP+ W++   FIPERF D SID+KG +FE+IPFGAGRR+CPGM+FGLAS+ LPLA+LLYHF+W+LPN MK EDLDM E F  TV RK  L +IP  Y  S
Sbjct:  356 YLKSVIKETLRLHPPSQLI-PRECIISTNIDGYEIPIKTKVMINTWAIGRDPQYWSDADRFIPERFNDSSIDFKGNSFEYIPFGAGRRMCPGMTFGLASITLPLALLLYHFNWELPNKMKPEDLDMDEHFGMTVARKNKLFLIPTVYEAS 504          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C7D95_MENGR (Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D95 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 4.161e-49
Identity = 87/152 (57.24%), Postives = 116/152 (76.32%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHPSS 458
            K+ +  VKET+R+HP  PL+ PR C E C++NG+ IP KA++ +N W++GR+P  W +P +F PERF   S D+ G++FEFIPFGAGRRICPG++FGLA+VE+PLA LLYHFDWKL  GMK  D+DM+EA   T  RK +L ++P PY+PSS
Sbjct:  347 KYMKSVVKETMRMHPPIPLI-PRSCREECEVNGYKIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGSDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMKPSDMDMSEAEGLTGIRKNNLLLVPTPYNPSS 497          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71DD_MENPI (Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D13 PE=1 SV=1)

HSP 1 Score: 191.43 bits (485), Expect = 3.523e-48
Identity = 86/152 (56.58%), Postives = 113/152 (74.34%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHPSS 458
            K+ +  VKET+R+HP  PL+ PR C E C++NG+ IP KA++ +N W++GR+P  W +P +F PERF   S D+ G +FEFIPFGAGRRICPG++FGLA+VE+PLA LLYHFDWKL  GM   D+DM+EA   T  RK +L ++P PY PSS
Sbjct:  350 KYMKSVVKETMRMHPPIPLI-PRSCREECEVNGYTIPNKARIMINVWSMGRNPLYWEKPETFWPERFDQVSRDFMGNDFEFIPFGAGRRICPGLNFGLANVEVPLAQLLYHFDWKLAEGMNPSDMDMSEAEGLTGIRKNNLLLVPTPYDPSS 500          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71DC_CATRO (Tabersonine 16-hydroxylase (Fragment) OS=Catharanthus roseus GN=CYP71D12 PE=1 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.601e-48
Identity = 87/154 (56.49%), Postives = 113/154 (73.38%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPYHPSSVA 464
            K+ Q  +KETLRLHP  PLLLPREC E+C+I G+ IP K++V VNAWAIGRDP  W EP  F P+RFL+  +D+KG +FE++PFG GRRICPG++F LA++ELPLA LL+HFDW+       E L+M E+   TVRR+ DL + P+ +  SS A
Sbjct:  346 KYLQAVIKETLRLHPPVPLLLPRECREQCKIKGYTIPSKSRVIVNAWAIGRDPNYWIEPEKFNPDRFLESKVDFKGNSFEYLPFGGGRRICPGITFALANIELPLAQLLFHFDWQ----SNTEKLNMKESRGVTVRREDDLYLTPVNFSSSSPA 495          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71BH_ARATH (Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=CYP71B17 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 4.601e-48
Identity = 85/145 (58.62%), Postives = 109/145 (75.17%), Query Frame = 3
Query:    6 FFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPI 440
            F  L +KET RLHPVAPLLLPRE     ++ G+DIP K ++ VNAWAIGRDPK WT+P  F PERF+D  +DY+G +FE +PFG+GRRICPGM+ G+A++EL L  LLY FDWKLP+GM H+D+D  EA   TV +K  L ++P+
Sbjct:  355 FLNLVIKETFRLHPVAPLLLPRETMAHVKVQGYDIPPKRRILVNAWAIGRDPKLWTDPEEFKPERFIDSPVDYRGQHFELLPFGSGRRICPGMAMGMATLELGLLNLLYFFDWKLPDGMSHKDIDTEEAGTLTVVKKVHLKLVPV 499          
BLAST of CF835215 vs. ExPASy Swiss-Prot
Match: C71DI_MENSP (Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D18 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 6.009e-48
Identity = 85/148 (57.43%), Postives = 112/148 (75.68%), Query Frame = 3
Query:    3 KFFQLCVKETLRLHPVAPLLLPRECGERCQINGFDIPVKAKVFVNAWAIGRDPKDWTEPASFIPERFLDHSIDYKGTNFEFIPFGAGRRICPGMSFGLASVELPLAMLLYHFDWKLPNGMKHEDLDMTEAFATTVRRKQDLCMIPIPY 446
            K+ +  +KETLRLHP  PL+ PR+  E C++NG+ IP K ++F+N WAIGRDP+ W +P +F PERF + S D+ G +FEFIPFGAGRRICPG+ FGLA+VE+PLA LLYHFDWKLP GM   DLDMTE    +  +K+++C++P  Y
Sbjct:  347 KYLRSVLKETLRLHPPFPLI-PRQSREECEVNGYTIPAKTRIFINVWAIGRDPQYWEDPDTFRPERFDEVSRDFMGNDFEFIPFGAGRRICPGLHFGLANVEIPLAQLLYHFDWKLPQGMTDADLDMTETPGLSGPKKKNVCLVPTLY 493          
The following BLAST results are available for this feature:
BLAST of CF835215 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 277
Match NameE-valueIdentityDescription
C71D9_SOYBN7.830e-5665.77Cytochrome P450 71D9 OS=Glycine max GN=CYP71D9 PE=... [more]
C71DA_SOYBN6.628e-5563.76Cytochrome P450 71D10 OS=Glycine max GN=CYP71D10 P... [more]
C71DB_LOTJA6.859e-5261.33Cytochrome P450 71D11 (Fragment) OS=Lotus japonicu... [more]
C71D7_SOLCH1.170e-5162.00Cytochrome P450 71D7 OS=Solanum chacoense GN=CYP71... [more]
C71D8_SOYBN3.186e-4960.67Cytochrome P450 71D8 OS=Glycine max GN=CYP71D8 PE=... [more]
C7D95_MENGR4.161e-4957.24Cytochrome P450 71D95 OS=Mentha gracilis GN=CYP71D... [more]
C71DD_MENPI3.523e-4856.58Cytochrome P450 71D13 OS=Mentha piperita GN=CYP71D... [more]
C71DC_CATRO4.601e-4856.49Tabersonine 16-hydroxylase (Fragment) OS=Catharant... [more]
C71BH_ARATH4.601e-4858.62Cytochrome P450 71B17 OS=Arabidopsis thaliana GN=C... [more]
C71DI_MENSP6.009e-4857.43Cytochrome P450 71D18 OS=Mentha spicata GN=CYP71D1... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_06N17_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06N17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835215 ID=CF835215; Name=CF835215; organism=Citrus sinensis; type=EST; length=669bp
TGAAATTTTTCCAATTATGTGTTAAAGAGACTTTGAGATTACATCCTGTT
GCCCCGTTGCTACTTCCAAGAGAATGTGGAGAGAGATGTCAAATTAATGG
ATTTGACATTCCTGTGAAAGCTAAAGTTTTTGTTAATGCATGGGCGATTG
GAAGAGATCCCAAGGACTGGACTGAACCTGCGAGCTTTATTCCAGAGAGG
TTCCTCGATCATTCTATTGACTACAAGGGTACTAATTTTGAATTCATACC
ATTTGGAGCTGGTAGGAGGATATGCCCTGGAATGTCATTTGGTCTGGCCA
GCGTGGAACTTCCACTGGCGATGCTATTATACCATTTTGACTGGAAACTA
CCAAATGGTATGAAGCATGAAGATTTGGACATGACCGAGGCCTTTGCCAC
GACAGTAAGAAGAAAACAAGATTTGTGCATGATTCCTATTCCTTACCATC
CTTCATCTGTTGCATAAGAACTAAAGGAAAATTTTATTATTATTCTTATT
AGTATTTGTTATCAACTGTCTCTGAAACTCTTTTTGTTTTTGTAGACCTT
TGCTGGTTCCTGAGATTTAAATTCATGGTGTACACTTTTGTTTCTCTCTG
TCTTACTCTCTCCNTAAGTTTTACTTTTTTTTTGGATAAAATAAACAGCT
AATATTTTCATGATTGGAA
back to top