CF835230

Overview
NameCF835230
Unique NameCF835230
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig802 contig Csv1_Contig802:906..1524. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_CAPAN (Caffeic acid 3-O-methyltransferase OS=Capsicum annuum GN=COMT PE=2 SV=2)

HSP 1 Score: 120.168 bits (300), Expect = 8.637e-27
Identity = 52/93 (55.91%), Postives = 68/93 (73.12%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCLK LKNCY+++P +GKV+V E +LPE P+TS  +K+  H+D++M+  NPGGKERT+ EF  LA GAGF+G R        WVMEF+K
Sbjct:  267 WSDEHCLKFLKNCYEALPANGKVLVAECILPETPDTSAATKNAVHVDIVMLAHNPGGKERTEKEFEALAKGAGFTGFRRACCAYQTWVMEFHK 359          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 3.282e-26
Identity = 54/93 (58.06%), Postives = 67/93 (72.04%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W D HCL++LKNCYKS+PE+GKVIV E +LPE P+T+  +++  HIDV+M+  NPGGKERT+ EF  LA GAGF G        N WVMEF K
Sbjct:  262 WSDAHCLQVLKNCYKSLPENGKVIVAECILPEAPDTTPATQNVIHIDVIMLAHNPGGKERTEKEFEALAKGAGFKGFNKAACALNTWVMEFCK 354          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 4.739e-25
Identity = 51/93 (54.84%), Postives = 67/93 (72.04%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCLK LKNCY+++P++GKVIV E +LP  P++S+ +K   HIDV+M+  NPGGKERT+ EF  LA GAGF G +      N ++MEF K
Sbjct:  271 WSDEHCLKFLKNCYEALPDNGKVIVAECILPVAPDSSLATKGVVHIDVIMLAHNPGGKERTQKEFEDLAKGAGFQGFKVHCNAFNTYIMEFLK 363          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.379e-24
Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCLK LKNCY ++P++GKVI+ E +LP  P+TS+ +K   HIDV+M+  NPGGKERT+ EF  LA G+GF GIR      N +V+EF K
Sbjct:  271 WSDEHCLKFLKNCYAALPDNGKVILGECILPVAPDTSLATKGVVHIDVVMLAHNPGGKERTEQEFEALAKGSGFQGIRVACNAFNTYVIEFLK 363          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 1.379e-24
Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W D+HC KLLKNCY+++P++GKVI+ E +LPE P+TS+ +++  H+DV+M+  NPGGKERT+ EF  LA GAGF   R      N W+ME  K
Sbjct:  258 WSDDHCRKLLKNCYQALPDNGKVILAECVLPEAPDTSLATQNVVHVDVVMLAHNPGGKERTEKEFEALAKGAGFKEFRKVCSAVNTWIMELCK 350          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 3.072e-24
Identity = 47/93 (50.54%), Postives = 66/93 (70.97%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W D HCLK LKNC++++PE+GKVI+ E +LPE P++++ +++  H+DV+M+  NPGGKERT+ EF  LA GAGF G        N W+ME  K
Sbjct:  271 WSDAHCLKFLKNCHEALPENGKVILAECLLPEAPDSTLSTQNTVHVDVIMLAHNPGGKERTEKEFEALAKGAGFRGFIKVCCAYNSWIMELLK 363          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 4.012e-24
Identity = 52/93 (55.91%), Postives = 63/93 (67.74%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCLK LKNCY ++PE GKVIV E +LP  P+ S+ +K   HID +M+  NPGGKERT+ EF  LA GAGF G +      N +VMEF K
Sbjct:  276 WSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 6.844e-24
Identity = 51/93 (54.84%), Postives = 64/93 (68.82%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCL+LLKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+D +M+  NPGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  270 WSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.938e-24
Identity = 51/93 (54.84%), Postives = 63/93 (67.74%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W DEHCL  LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  NPGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  270 WSDEHCLTFLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDVIMLAHNPGGKERTDREFESLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF835230 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 8.938e-24
Identity = 51/93 (54.84%), Postives = 64/93 (68.82%), Query Frame = -3
Query:  340 WDDEHCLKLLKNCYKSVPEDGKVIVVELMLPEVPNTSIESKSNSHIDVLMMTQNPGGKERTKHEFTPLATGAGFSGIRSDLVTGNFWVMEFYK 618
            W D HCLK LKNCY ++PE+GKVI+VE +LP  P+TS+ +K   H+DV+M+  NPGGKERT+ EF  LA GAGF G        N  V+EF K
Sbjct:  271 WSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLANGAGFQGFEVMCCAFNTHVIEFRK 363          
The following BLAST results are available for this feature:
BLAST of CF835230 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_CAPAN8.637e-2755.91Caffeic acid 3-O-methyltransferase OS=Capsicum ann... [more]
COMT1_ZINEL3.282e-2658.06Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
COMT1_MEDSA4.739e-2554.84Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH1.379e-2455.91Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_COFCA1.379e-2452.69Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT1_CATRO3.072e-2450.54Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_CLABR4.012e-2455.91Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT3_POPKI6.844e-2454.84Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT2_POPTM8.938e-2454.84Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_POPKI8.938e-2454.84Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O03_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835230 ID=CF835230; Name=CF835230; organism=Citrus sinensis; type=EST; length=620bp
TTTTTTTTTTTTTTAGGAAATAATTTGTCTGCATCCTTTATTCAACCTTT
TAAAGGCATTTTATAAGAGCCAATTGAAAACATATGATCTACAGTATTAA
CTACATTAAGAACAAAAAAAGACACTCTAGAAAATAACACATGAAATACG
AGAAATAAAAGGAAATATGGGCAATATAGCACAGGTAGTTAATAGACGAC
GGCTCAAGCACCCATTTATTTCAAAGAAACTTATTACTAAGTCGTAGACT
CCTCTTCTCAAGCATGGCTATGGTACATTGGAAGCTTGTTAAATGCATGG
CTTGTTGCTCGTCTCTAGGATGCATGGGCAAGCACTCTACTTATAGAACT
CCATAACCCAGAAATTACCAGTAACAAGATCAGATCTGATCCCACTAAAA
CCAGCGCCAGTAGCCAGGGGCGTGAATTCATGCTTTGTTCTCTCCTTTCC
ACCGGGATTTTGAGTCATCATAAGCACGTCAATATGGGAATTTGATTTTG
ATTCAATGCTTGTATTAGGAACTTCTGGAAGCATTAACTCCACAACGATT
ACCTTTCCATCTTCTGGAACGCTTTTGTAGCAATTCTTCAACAACTTCAA
GCAATGTTCATCGTCCCAAT
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