CF835232

Overview
NameCF835232
Unique NameCF835232
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length582
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1050 contig Csv1_Contig1050:411..992. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: ASO_TOBAC (L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 7.496e-59
Identity = 102/159 (64.15%), Postives = 121/159 (76.10%), Query Frame = -3
Query:  104 PPENFWNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 580
            PP+NF  +YDV+K   N+N+T G+GVYML  NTT+D+ILQNANA+  ++SE HPWHLHGHDFWVLG GEGKF+++D            NTAVIFP+GWTALRFV DNPG WAFHCHIEPH H+GMGV+ A GV  V  IP +ALACGLTGK  M+ K N
Sbjct:  420 PPDNFPKDYDVLKQAPNSNSTYGNGVYMLKFNTTIDIILQNANALAKDVSEIHPWHLHGHDFWVLGYGEGKFSEKDVKKFNLKNPPLRNTAVIFPFGWTALRFVTDNPGVWAFHCHIEPHLHMGMGVIFAEGVHLVKKIPKEALACGLTGKMLMSNKHN 578          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: ASO_CUCPM (L-ascorbate oxidase OS=Cucurbita pepo var. melopepo PE=1 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.197e-56
Identity = 100/159 (62.89%), Postives = 115/159 (72.33%), Query Frame = -3
Query:  104 PPENFWNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMNPKQN 580
            PPE F  +YD+  PP N  T +G+GVY   +   VDVILQNAN ++ NLSETHPWHLHGHDFWVLG G+GKF+ E+E           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +ALACG T K  +N  +N
Sbjct:  393 PPEVFPEDYDIDTPPTNEKTRIGNGVYQFKIGEVVDVILQNANMMKENLSETHPWHLHGHDFWVLGYGDGKFSAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLINNPKN 551          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: ASO_CUCMA (L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=1 SV=2)

HSP 1 Score: 216.468 bits (550), Expect = 7.757e-56
Identity = 99/155 (63.87%), Postives = 112/155 (72.26%), Query Frame = -3
Query:  116 PPENFWNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLTGKRFMN 580
            PPE F  +YD+  PP N  T +G+GVY   +   VDVILQNAN ++ NLSE HPWHLHGHDFWVLG G+GKFT E+E           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GVE VG IP +ALACG T K  +N
Sbjct:  423 PPEVFPEDYDIDTPPTNEKTKIGNGVYQFKIGEIVDVILQNANMMKENLSEIHPWHLHGHDFWVLGYGDGKFTAEEESSLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVEKVGRIPTKALACGGTAKSLIN 577          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: ASO_CUCSA (L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 4.257e-54
Identity = 99/150 (66.00%), Postives = 107/150 (71.33%), Query Frame = -3
Query:  134 PPENFWNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQALACGLT 580
            PPE F   YD+  PP N  TT G+GVY   +  TVDVILQNAN + PN+SE HPWHLHGHDFWVLG GEGKF   EDE           NT VIFPYGWTA+RFVADNPG WAFHCHIEPH H+GMGVV A GV  VG IP +ALACG T
Sbjct:  428 PPETFPLNYDINNPPPNPETTTGNGVYKFNMGETVDVILQNANMLNPNMSEIHPWHLHGHDFWVLGYGEGKFYAPEDEKKLNLKNPPLRNTVVIFPYGWTAIRFVADNPGVWAFHCHIEPHLHMGMGVVFAEGVHMVGMIPPKALACGST 577          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC16_ARATH (Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.637e-21
Identity = 59/142 (41.55%), Postives = 78/142 (54.93%), Query Frame = -3
Query:  149 NEYDVMKPP---VNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 562
            N YD   P    VNA T  G+ +Y L  N TV ++LQN   I   LS+ HP+HLHG +F+ +GRG G F  E +              V  P G WTA+RF+ADNPG W  HCH+E   H   G+ +A  V+  G+ P+Q+L
Sbjct:  421 NPYDYTAPVKLGVNAATMKGTKLYRLPYNATVQIVLQNTAMI---LSDNHPFHLHGFNFFEVGRGLGNFNPEKDPKAFNLVDPVERNTVGVPAGGWTAIRFIADNPGVWFMHCHLE--LHTTWGLKMAFVVDN-GHGPDQSL 556          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC11_ORYSJ (Putative laccase-11 OS=Oryza sativa subsp. japonica GN=LAC11 PE=5 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 4.021e-20
Identity = 50/132 (37.88%), Postives = 72/132 (54.55%), Query Frame = -3
Query:  149 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPY-GWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 541
            PP N   T G+ V  L  NTTV+V+LQ+ + +    +E+HP HLHG+DF+V+G G G +   ++              +  P  GW A+RFVADNPG W  HCH++ H   G+ +   +     G +PNQ L
Sbjct:  404 PPNNTFVTHGTRVVPLSFNTTVEVVLQDTSILG---AESHPLHLHGYDFYVVGTGFGNYDASNDTAKYNLVDPVQRNTISVPTAGWVAIRFVADNPGVWIMHCHLDVHLSWGLSMAWLV---NDGPLPNQKL 529          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC10_ARATH (Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 5.807e-19
Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = -3
Query:  149 KPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKF-TKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 544
            KPP N  T   + +Y L  N+TV V+LQ+   + P   E HP HLHG +F+V+G G G + +K+D            NT  +   GW A+RF ADNPG W  HCH+E   H   G+ +A  VE  G  PNQ++
Sbjct:  422 KPPSNLATMKATKLYKLPYNSTVQVVLQDTGNVAP---ENHPIHLHGFNFFVVGLGTGNYNSKKDSNKFNLVDPVERNTVGVPSGGWAAIRFRADNPGVWFMHCHLE--VHTTWGLKMAFLVEN-GKGPNQSI 548          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC7_ORYSJ (Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 PE=2 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.294e-18
Identity = 46/109 (42.20%), Postives = 64/109 (58.72%), Query Frame = -3
Query:  188 GSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYGWTALRFVADNPGAWAFHCHIEPHFHIGMGVVLAL 514
            G+ V  L  N+TV+++LQN  A     SE HP HLHG +F+VL +G G FT  +            NT  +   GW  +RFVA+NPG W FHCH++ H  +G+G+V A+
Sbjct:  434 GTKVRRLKYNSTVEIVLQNPTAFP---SENHPIHLHGFNFFVLAQGLGNFTPGNVSGYNLVDPVSRNTLAVPTGGWAVIRFVANNPGMWFFHCHLDAHVPMGLGMVFAV 539          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC2_ARATH (Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 3.764e-18
Identity = 50/132 (37.88%), Postives = 71/132 (53.79%), Query Frame = -3
Query:  149 PPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 541
            PP N   + G+ V +L   TTV+++LQ  + +     E HP HLHG +F+V+G+G G F    +              +  P G W A+RF+ADNPG W  HCHIE   H+  G+ +A  V   G++PNQ L
Sbjct:  438 PPNNTMVSRGTKVVVLKYKTTVELVLQGTSILG---IEAHPIHLHGFNFYVVGQGFGNFNPARDPKHYNLVDPVERNTINIPSGGWVAIRFLADNPGVWLMHCHIE--IHLSWGLTMA-WVVLDGDLPNQKL 563          
BLAST of CF835232 vs. ExPASy Swiss-Prot
Match: LAC2_ORYSJ (Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 6.420e-18
Identity = 52/145 (35.86%), Postives = 78/145 (53.79%), Query Frame = -3
Query:  149 PPENFWNEYDVMKPPVNANTTLGSGVYMLGLNTTVDVILQNANAIRPNLSETHPWHLHGHDFWVLGRGEGKFTKEDEXXXXXXXXXXXNTAVIFPYG-WTALRFVADNPGAWAFHCHIEPHFHIGMGVVLALGVETVGNIPNQAL 580
            PP  F   Y  +       T+LG+ +  +  N TV+++LQ+ N +     E+HP+HLHG++F+V+GRG G F    +              V  P G WTA+RF ADNPG W  HCH+E   H   G+ +A  VE  G+ P++++
Sbjct:  416 PPARF--NYTGVPLTAGLGTSLGTRLSKIAYNATVELVLQDTNLLSV---ESHPFHLHGYNFFVVGRGVGNFDPAKDPAKYNLVDPPERNTVGVPAGGWTAIRFRADNPGVWFLHCHLE--VHTSWGLKMAFLVED-GSGPDESV 552          
The following BLAST results are available for this feature:
BLAST of CF835232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 51
Match NameE-valueIdentityDescription
ASO_TOBAC7.496e-5964.15L-ascorbate oxidase OS=Nicotiana tabacum GN=AAO PE... [more]
ASO_CUCPM1.197e-5662.89L-ascorbate oxidase OS=Cucurbita pepo var. melopep... [more]
ASO_CUCMA7.757e-5663.87L-ascorbate oxidase OS=Cucurbita maxima GN=AAO PE=... [more]
ASO_CUCSA4.257e-5466.00L-ascorbate oxidase OS=Cucumis sativus PE=1 SV=1[more]
LAC16_ARATH3.637e-2141.55Laccase-16 OS=Arabidopsis thaliana GN=LAC16 PE=2 S... [more]
LAC11_ORYSJ4.021e-2037.88Putative laccase-11 OS=Oryza sativa subsp. japonic... [more]
LAC10_ARATH5.807e-1940.60Laccase-10 OS=Arabidopsis thaliana GN=LAC10 PE=2 S... [more]
LAC7_ORYSJ1.294e-1842.20Laccase-7 OS=Oryza sativa subsp. japonica GN=LAC7 ... [more]
LAC2_ARATH3.764e-1837.88Laccase-2 OS=Arabidopsis thaliana GN=LAC2 PE=2 SV=... [more]
LAC2_ORYSJ6.420e-1835.86Laccase-2 OS=Oryza sativa subsp. japonica GN=LAC2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O04_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835232 ID=CF835232; Name=CF835232; organism=Citrus sinensis; type=EST; length=582bp
TTTTTTTTTTTTTTTATTCACTCCGAAATTTTATTAATATAAATCCCTTT
ACAACAATAGAAACTCCAGGAATAAAGTACATAAAACCATCTAGCTAGCC
TCAATTTTGTTTAGGGTTCATGAACCTTTTCCCAGTCAAACCACAAGCCA
ACGCCTGGTTTGGAATATTACCAACGGTTTCAACACCAAGAGCAAGAACC
ACACCCATTCCAATATGGAAATGGGGCTCAATATGGCAGTGAAATGCCCA
AGCACCTGGATTATCAGCAACAAATCTTAAAGCAGTCCAGCCATATGGGA
ATATCACCGCAGTATTTTTCAATGGTGGATTCTTCAAGTTAAATTTCTTC
TCATCTTCTTTCGTAAACTTCCCTTCTCCGCGCCCTAATACCCAAAAATC
ATGCCCATGCAAATGCCAAGGGTGGGTTTCACTCAAGTTTGGCCTTATCG
CGTTTGCATTTTGAAGTATAACATCAACTGTGGTGTTTAAACCAAGCATG
TAAACCCCACTTCCAAGAGTTGTATTAGCGTTTACAGGAGGTTTCATCAC
GTCATACTCATTCCAGAAGTTTTCGGGGGGAC
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