CF835254

Overview
NameCF835254
Unique NameCF835254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length731
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8420 contig Csv1_Contig8420:76..805. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI2_TOBAC (Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=FER2 PE=2 SV=1)

HSP 1 Score: 272.707 bits (696), Expect = 1.417e-72
Identity = 146/221 (66.06%), Postives = 163/221 (73.76%), Query Frame = 3
Query:   72 EALNPLFSSVSSAFPPNPSLRFSSPKNDNGV-VVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            E L+P+ S+ S  F     L+  S K+ NG+ VVCASK +N  PLTGV+F PFEEVKKEL LVPTVPQ+SLARHK++D CEAA+NEQINVEYNVSYVYH M+AYFDRDNVALKGL                KLMEYQNKRGGKVKLQSILMPLSEFDHAE+GDALYAME                H VA +N+DVQLADFVES+YL EQVEAIK ISEYVA
Sbjct:   17 ENLSPMLSTSSQGFV----LKNFSTKSRNGLLVVCASKGSNTKPLTGVVFEPFEEVKKELMLVPTVPQVSLARHKYSDQCEAAVNEQINVEYNVSYVYHGMYAYFDRDNVALKGLARFFKESSEEERGHAEKLMEYQNKRGGKVKLQSILMPLSEFDHAEEGDALYAMELALSLAKLTNQKLLNLHAVATRNNDVQLADFVESKYLREQVEAIKMISEYVA 233          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI3_SOYBN (Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1)

HSP 1 Score: 271.937 bits (694), Expect = 2.417e-72
Identity = 146/216 (67.59%), Postives = 159/216 (73.61%), Query Frame = 3
Query:   84 PLFSSVSSAFPPNPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            PL +S SS       +R+S     N +V CA+K+ NN PLTGV+F PFEEVKKELDLVPTVPQ SLAR K+TDDCEA INEQINVEYNVSYVYHAMFAYFDRDNVALKGL                KLMEYQNKRGGKVKLQSI+MPLSEFDH EKGDALYAME                H VA+KN+DVQLADF+ESE+L EQVEAIKKISEYVA
Sbjct:   21 PLPNSSSSGI-----IRYSQSLGKN-LVPCATKDTNNRPLTGVVFEPFEEVKKELDLVPTVPQASLARQKYTDDCEATINEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSEFDHEEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLADFIESEFLGEQVEAIKKISEYVA 230          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI4_SOYBN (Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2)

HSP 1 Score: 250.751 bits (639), Expect = 5.766e-66
Identity = 138/214 (64.49%), Postives = 154/214 (71.96%), Query Frame = 3
Query:   93 SSVSSAFPPNPSLRFSSPKNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            +S  S F PN     S P    G+VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ E+A+NEQINVEYNVSYVYHAMFAYFDRDNVAL+GL                KLMEYQNKRGGKVKLQSI+MPLS+FDHA+KGDAL+AME                H VA KN DVQLADFVE+EYL EQVEAIK+ISEYVA
Sbjct:   10 ASSLSLFSPNAEPPRSVPAR--GLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESESAVNEQINVEYNVSYVYHAMFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNKRGGKVKLQSIVMPLSDFDHADKGDALHAMELALSLEKLTNEKLLNLHSVATKNGDVQLADFVETEYLGEQVEAIKRISEYVA 221          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI1_TOBAC (Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=FER1 PE=2 SV=1)

HSP 1 Score: 248.825 bits (634), Expect = 2.191e-65
Identity = 136/222 (61.26%), Postives = 152/222 (68.47%), Query Frame = 3
Query:   66 QKEALNPLFSSVSSAFPPNPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            Q E L+PLFSS  S           SPKN N  VV ASK  N+ PLTGV+F PFEE+KKEL LVP VP  SL R K++DDCEAAINEQINVEYN SYVYHAMFAYFDRDNVALKGL                KLME+QNKRGG+VKL SI  P +EFDH EKGDALYAME                H VA++++DV LADF+ESE+L EQV+AIKKISEYVA
Sbjct:   15 QGENLSPLFSSSKSF----------SPKNGNRFVVSASKATNHKPLTGVVFEPFEELKKELMLVPAVPDTSLCRQKYSDDCEAAINEQINVEYNNSYVYHAMFAYFDRDNVALKGLAKFFKESSLEEREHAEKLMEFQNKRGGRVKLLSICAPPTEFDHCEKGDALYAMELALCLEKLTNQRLLNLHAVASRSNDVHLADFLESEFLVEQVDAIKKISEYVA 226          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI2_VIGUN (Ferritin-2, chloroplastic OS=Vigna unguiculata GN=PFE2 PE=2 SV=2)

HSP 1 Score: 248.054 bits (632), Expect = 3.738e-65
Identity = 137/217 (63.13%), Postives = 155/217 (71.43%), Query Frame = 3
Query:   93 SSVSSAFPPNPSLRFSSP---KNDNGVVVCASKNA-NNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            +S  S F PN     S P    N + +VV A+K + N+  LTGVIF PFEEVKKELDLVPTVPQ SLAR K+ D+ EAA+NEQINVEYNVSYVYHA+FAYFDRDNVAL+GL                KLMEYQN+RGGKVKLQSI+MPLSEFDHA+KGDAL+AME                H VA KN DVQLADFVESE+L EQVE+IK+ISEYVA
Sbjct:    8 ASSLSLFNPNAEPSRSVPVLANNASRLVVRAAKGSTNHRALTGVIFEPFEEVKKELDLVPTVPQASLARQKYVDESEAAVNEQINVEYNVSYVYHALFAYFDRDNVALRGLAKFFKESSEEEREHAEKLMEYQNRRGGKVKLQSIVMPLSEFDHADKGDALHAMELALSLEKLTNEKLLHLHSVATKNGDVQLADFVESEFLGEQVESIKRISEYVA 224          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI4_ARATH (Ferritin-4, chloroplastic OS=Arabidopsis thaliana GN=FER4 PE=2 SV=1)

HSP 1 Score: 245.358 bits (625), Expect = 2.423e-64
Identity = 133/222 (59.91%), Postives = 157/222 (70.72%), Query Frame = 3
Query:   69 KEALNPLFSSVSSAFPPNPSLRFSSPKNDNGVVVC-ASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            K+ ++PL  S+SS      +LR SS K+ N      ASK++    L+GV+F PF+EVKKELDLVPT   LSLAR K++D+CEAAINEQINVEYNVSYVYHAM+AYFDRDN+ALKGL                KLMEYQNKRGG+VKLQSI+MPLSEF+H +KGDALY ME                H VA+KN+DV LADF+ESE+L EQVEAIK ISEYVA
Sbjct:   23 KKDVSPLLPSISS------NLRVSSGKSGNLTFSFRASKSSTTDALSGVVFEPFKEVKKELDLVPTSSHLSLARQKYSDECEAAINEQINVEYNVSYVYHAMYAYFDRDNIALKGLAKFFKESSLEEREHAEKLMEYQNKRGGRVKLQSIVMPLSEFEHVDKGDALYGMELALSLEKLVNEKLLNLHSVASKNNDVHLADFIESEFLTEQVEAIKLISEYVA 238          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI3_ARATH (Ferritin-3, chloroplastic OS=Arabidopsis thaliana GN=FER3 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 5.052e-62
Identity = 131/225 (58.22%), Postives = 158/225 (70.22%), Query Frame = 3
Query:   66 QKEALNPLFSSVSSAFPPNPSLRFSSPKNDN-GVVVCASKNANN--SPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            +K+ ++PLFSS SS   P      SS K+ N    + ASK++    S L+GV+F PFEEVKKE+DLVP+  QLSLARH ++ +CEAA+NEQINVEYNVSYVYHA++AYFDRDNVALKGL                 LMEYQNKRGG+VKLQ +++P SEFDH EKGDALYAME                H VA+KN DVQLADF+ES +L+EQVEAIKKISEYV+
Sbjct:   17 EKKDISPLFSSSSSISSP-----VSSGKSGNLSFPLRASKSSTTTTSTLSGVVFEPFEEVKKEMDLVPSGQQLSLARHLYSPECEAAVNEQINVEYNVSYVYHALYAYFDRDNVALKGLAKFFKESSVEEREHAELLMEYQNKRGGRVKLQPMVLPQSEFDHPEKGDALYAMELALSLEKLVNEKLLNLHSVASKNDDVQLADFIESVFLNEQVEAIKKISEYVS 236          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI2_ARATH (Ferritin-2, chloroplastic OS=Arabidopsis thaliana GN=FER2 PE=2 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 1.920e-61
Identity = 129/225 (57.33%), Postives = 148/225 (65.78%), Query Frame = 3
Query:   63 PQKEALNPLFSSVSSAFPP--NPSLRFSSPKNDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            P    L+  ++   + FPP  N S    SP       V A+K  N   LTGV+F PFEEVKKE++LVPT P +SLARHKF+DD E+AIN+QINVEYNVSYVYHA++AYFDRDNV LKG                   MEYQNKRGG+VKLQSILMP+SEFDH EKGDAL+AME                  V  KN+DVQL DFVESE+L EQVEAIKKISEYVA
Sbjct:    7 PALSLLSSGYTGGGNLFPPSRNSSNLLFSPSGSR-FSVQAAKGTNTKSLTGVVFEPFEEVKKEMELVPTTPFVSLARHKFSDDSESAINDQINVEYNVSYVYHALYAYFDRDNVGLKGFAKFFNDSSLEERGHAEMFMEYQNKRGGRVKLQSILMPVSEFDHEEKGDALHAMELALSLEKLTNEKLLKLQSVGVKNNDVQLVDFVESEFLGEQVEAIKKISEYVA 230          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI1_MAIZE (Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1 SV=2)

HSP 1 Score: 220.32 bits (560), Expect = 8.346e-57
Identity = 114/208 (54.81%), Postives = 136/208 (65.38%), Query Frame = 3
Query:  117 PNPSLRFSSPK---NDNGVVVCASKNANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYVA 731
            P P +R ++P+   + +    C +       L+GV+F PFEE+K EL LVP  P  SLARHKF DDCEAA+NEQINVEYN SY YH++FAYFDRDNVALKG                 KLMEYQNKRGG+V+LQSI+ PL+EFDH EKGDALYAME                H VA + +D QL DF+ESE+L EQ EAI KIS+YVA
Sbjct:   24 PAPVVRVAAPRGVASPSAGAACRAAGKGKEVLSGVVFQPFEEIKGELALVPQSPDKSLARHKFVDDCEAALNEQINVEYNASYAYHSLFAYFDRDNVALKGFAKFFKESSDEEREHAEKLMEYQNKRGGRVRLQSIVTPLTEFDHPEKGDALYAMELALALEKLVNEKLHNLHGVATRCNDPQLTDFIESEFLEEQGEAINKISKYVA 231          
BLAST of CF835254 vs. ExPASy Swiss-Prot
Match: FRI1_BRANA (Ferritin-1, chloroplastic OS=Brassica napus GN=LSC30 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 1.859e-56
Identity = 116/210 (55.24%), Postives = 140/210 (66.67%), Query Frame = 3
Query:  102 SSAFPPNPSLRFSSPKNDNGVVVCASK-NANNSPLTGVIFAPFEEVKKELDLVPTVPQLSLARHKFTDDCEAAINEQINVEYNVSYVYHAMFAYFDRDNVALKGLXXXXXXXXXXXXXXXXKLMEYQNKRGGKVKLQSILMPLSEFDHAEKGDALYAMEXXXXXXXXXXXXXXXXHKVANKNHDVQLADFVESEYLHEQVEAIKKISEYV 728
            SSA P   SL FS      GVV  +S  + NN P+TGV+F PFEEVKK    +P     SLAR ++ D  EAAINEQINVEYNVSYVYH+M+AYFDRDNVALKGL                K MEYQN+RGG+V L  I+ P+S+F+HAEKGDALYAME                H+VA++N+D QLADFVESE+L EQ+EAIKKIS+++
Sbjct:   24 SSASPSVMSLSFSRHTGGRGVVAASSTVDTNNMPMTGVVFQPFEEVKKADLAIPITSNASLARQRYADSSEAAINEQINVEYNVSYVYHSMYAYFDRDNVALKGLAKFFKESSDEEREHAEKFMEYQNQRGGRVTLHPIVSPISDFEHAEKGDALYAMELALSLEKLTNEKLLNLHRVASENNDPQLADFVESEFLGEQIEAIKKISDFI 233          
The following BLAST results are available for this feature:
BLAST of CF835254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 66
Match NameE-valueIdentityDescription
FRI2_TOBAC1.417e-7266.06Ferritin-2, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI3_SOYBN2.417e-7267.59Ferritin-3, chloroplastic OS=Glycine max PE=2 SV=1[more]
FRI4_SOYBN5.766e-6664.49Ferritin-4, chloroplastic OS=Glycine max PE=1 SV=2[more]
FRI1_TOBAC2.191e-6561.26Ferritin-1, chloroplastic OS=Nicotiana tabacum GN=... [more]
FRI2_VIGUN3.738e-6563.13Ferritin-2, chloroplastic OS=Vigna unguiculata GN=... [more]
FRI4_ARATH2.423e-6459.91Ferritin-4, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI3_ARATH5.052e-6258.22Ferritin-3, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI2_ARATH1.920e-6157.33Ferritin-2, chloroplastic OS=Arabidopsis thaliana ... [more]
FRI1_MAIZE8.346e-5754.81Ferritin-1, chloroplastic OS=Zea mays GN=FER1 PE=1... [more]
FRI1_BRANA1.859e-5655.24Ferritin-1, chloroplastic OS=Brassica napus GN=LSC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O18_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835254 ID=CF835254; Name=CF835254; organism=Citrus sinensis; type=EST; length=731bp
CAAAAACATTTCATTAAAAAAAAATGTTGCTCGAAGCATCTTCAGCTTTA
TCCCTCGTGAGCCCCCAAAAGGAGGCTCTAAATCCTCTGTTTTCCTCTGT
TTCTTCAGCCTTTCCGCCGAACCCGAGTCTCCGTTTTTCTTCACCGAAAA
ATGATAACGGCGTGGTGGTTTGCGCCTCTAAAAATGCTAACAACAGCCCC
TTAACCGGCGTCATTTTTGCTCCCTTTGAAGAGGTGAAAAAGGAGCTCGA
TTTGGTCCCAACTGTGCCTCAACTGTCTCTTGCCAGACACAAGTTCACTG
ACGATTGTGAGGCCGCAATCAACGAGCAGATCAATGTGGAATACAATGTC
TCCTATGTGTATCATGCCATGTTTGCTTACTTTGACAGAGACAATGTCGC
GCTCAAGGGTCTCGCCAAGTTTTTCAAGGAATCAAGTGAAGAGGAAAGAG
AGCATGCTGAGAAATTGATGGAATATCAGAACAAACGAGGAGGTAAAGTG
AAGCTGCAATCAATATTGATGCCTCTCTCTGAGTTTGATCATGCTGAGAA
AGGAGATGCTTTGTATGCCATGGAGCTTACGCTGTCTCTGGAGAAGCTAA
CAAATGAGAAACTCCTCAACTTGCACAAGGTGGCCAACAAGAACCATGAT
GTGCAGTTGGCAGATTTCGTTGAAAGCGAGTATTTACATGAGCAGGTAGA
AGCCATCAAAAAGATATCTGAATATGTTGCT
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