CF835257

Overview
NameCF835257
Unique NameCF835257
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length660
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11430 contig Csv1_Contig11430:233..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C76B1_HELTU (7-ethoxycoumarin O-deethylase OS=Helianthus tuberosus GN=CYP76B1 PE=1 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 1.541e-40
Identity = 85/182 (46.70%), Postives = 126/182 (69.23%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            L+I   L L + L+WV+ +     G+ K LPPGP   P+IGNL  LGA PH+SLAKLAKIHGPIMSL+LGQ+TT+V+SS + A+ +L+  DL+F  R VP+A+ +  + H   S+++L V T W+ LR+I + +IF++  L+A Q LR KK+++L+A+      + + + +G+AAF TSLNL
Sbjct:    4 LIIVSTLLLSYILIWVLGV-----GKPKNLPPGPTRLPIIGNLHLLGALPHQSLAKLAKIHGPIMSLQLGQITTLVISSATAAEEVLKKQDLAFSTRNVPDAVRA--YNHERHSISFLHVCTEWRTLRRIVSSNIFSNSSLEAKQHLRSKKVEELIAYCRKAALSNENVHIGRAAFRTSLNL 178          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C76C3_ARATH (Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CYP76C3 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.001e-31
Identity = 66/153 (43.14%), Postives = 101/153 (66.01%), Query Frame = 3
Query:  201 LPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            LPPGP   P++GN+ +LG  PH+SLA  +K +GPIMSL+LG++T VV+SSP  AK  L+ HD     R   +A+ +  F HH+ S+ W+P S  W+ L+K    ++ + Q LDA Q LR +K+++L++ V +    G+AID+ +A+F TS N+
Sbjct:   38 LPPGPPILPLVGNIFQLGFNPHRSLAAFSKTYGPIMSLKLGRLTAVVISSPEAAKEALRTHDHVMSARTFNDALRA--FDHHKHSIVWIPPSARWRFLKKTITKYLLSPQNLDAIQSLRMRKVEELVSLVNEFRERGEAIDLARASFVTSFNI 188          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C76C4_ARATH (Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CYP76C4 PE=2 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 6.491e-31
Identity = 73/191 (38.22%), Postives = 117/191 (61.26%), Query Frame = 3
Query:  108 MDLLINCILWLVFT------LVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVST-MWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            MD++    L+L+F       L+   A S  S GR   LPPGP   P+IGN+ ++G  PH S A LAKI+GPIMSL+ G + +VV++SP  A+ +L+ HD     R   ++I    F H E S+ WLP S+  W+ LRK+S   +F+ Q+ +A + LR KK+++L++ + ++    +A+D+ +A++ T LN+
Sbjct:    1 MDIISGQALFLLFCFISSCFLISTTARSRRSSGRAATLPPGPPRLPIIGNIHQVGKNPHSSFADLAKIYGPIMSLKFGCLNSVVITSPEAAREVLRTHDQILSGRKSNDSIRC--FGHEEVSVIWLPPSSARWRMLRKLSVTLMFSPQRTEATKALRMKKVQELVSFMNESSERKEAVDISRASYTTVLNI 189          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C76C1_ARATH (Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CYP76C1 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.224e-29
Identity = 66/183 (36.07%), Postives = 112/183 (61.20%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVST-MWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            LL+ C +   F +        +SRG    LPPGP   P+IGN+  +G  PH+S A+L+K +GP+MSL+LG + TVV++SP  A+ +L+ HD     R    A+ S+   H + SL WLP S+  W+ LR++S   + + Q+++A + LR  K+K+L++ + ++    +++D+ + AF T+LN+
Sbjct:   10 LLLFCFILSCFLIFTTTRSGRISRGA-TALPPGPPRLPIIGNIHLVGKHPHRSFAELSKTYGPVMSLKLGSLNTVVIASPEAAREVLRTHDQILSARSPTNAVRSI--NHQDASLVWLPSSSARWRLLRRLSVTQLLSPQRIEATKALRMNKVKELVSFISESSDREESVDISRVAFITTLNI 189          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C76C2_ARATH (Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CYP76C2 PE=2 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.938e-28
Identity = 67/191 (35.08%), Postives = 112/191 (58.64%), Query Frame = 3
Query:  108 MDLLINCILWLVFTLVWVMALSFVSRGRHKQL------PPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWL-PVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            MD++    L+ +F  V    + F +  R +        PPGP   P+IGN+  +G  PH S A L+K +GPIMSL+ G + TVVV+SP  A+ +L+ +D     R    +I S+   H + S+ WL P S+ W+ LRK+S   +F+ Q+++A + LR  K+K+L++ + ++    +A+D+ +A F T+LN+
Sbjct:    1 MDIIFEQALFPLFCFVLSFFIIFFTTTRPRSSRKVVPSPPGPPRLPIIGNIHLVGRNPHHSFADLSKTYGPIMSLKFGSLNTVVVTSPEAAREVLRTYDQILSSRTPTNSIRSI--NHDKVSVVWLPPSSSRWRLLRKLSATQLFSPQRIEATKTLRENKVKELVSFMSESSEREEAVDISRATFITALNI 189          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C80B2_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS=Eschscholzia californica GN=CYP80B2 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.211e-26
Identity = 60/167 (35.93%), Postives = 99/167 (59.28%), Query Frame = 3
Query:  159 VMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            ++ L F S G HK LPPGP+P+P++GNLL+LG KPH   A+LA+ +G I +L++G  T VV S+ S A  IL+ HD     R V ++       H E S+ W   +  WKNLRK+    +FT + +++   +R KK ++++ ++    + G+ + + +  F T +N+
Sbjct:   16 ILYLLFGSSG-HKNLPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVK--GHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNI 177          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C80B1_ESCCA ((S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (Fragment) OS=Eschscholzia californica GN=CYP80B1 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 1.829e-25
Identity = 61/182 (33.52%), Postives = 103/182 (56.59%), Query Frame = 3
Query:  114 LLINCILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            ++I+ IL+L+F               HK LPPGP+P+P++GNLL+LG KPH   A+LA+ +G I +L++G  T VV S+ S A  IL+ HD     R V ++       H E S+ W   +  WKNLRK+    +FT + +++   +R KK ++++ ++    + G+ + + +  F T +N+
Sbjct:   10 VIISSILYLLF-----------GGSGHKNLPPGPKPWPIVGNLLQLGEKPHAQFAELAQTYGDIFTLKMGTETVVVASTSSAASEILKTHDRILSARYVFQSFRVK--GHVENSIVWSDCTETWKNLRKVCRTELFTQKMIESQAHVREKKCEEMVEYLMK--KQGEEVKIVEVIFGTLVNI 176          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: F3PH_PETHY (Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=CYP75B2 PE=2 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.236e-23
Identity = 53/152 (34.87%), Postives = 94/152 (61.84%), Query Frame = 3
Query:  138 LVFTLVWVMALSFVSRGRHKQ-----LPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDL 578
            +++T+++   L F+ R   ++     LPPGP+P+P+IGNL+ LG KPH+S A +A+ +GP+M L++G V  VV +S S+A   L+ HD +F  R        + + + +  L + P    W+ LRKI ++H+F+++ LD  + +R+ ++K L
Sbjct:    7 ILYTVIFSFLLQFILRSFFRKRYPLPLPPGPKPWPIIGNLVHLGPKPHQSTAAMAQTYGPLMYLKMGFVDVVVAASASVAAQFLKTHDANFSSRPPNSGAEHMAYNYQD--LVFAPYGPRWRMLRKICSVHLFSTKALDDFRHVRQDEVKTL 156          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BC_ARATH (Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=CYP71B12 PE=2 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.449e-22
Identity = 54/176 (30.68%), Postives = 98/176 (55.68%), Query Frame = 3
Query:  132 LWLV---FTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTS 650
            LW +   F     M +  + R   K LPPGP   P+IGNL +LG+KPH+S+ KL++ +GP+MSL+ G V+TVV S+P   K +L+  D+  C R  P         ++   L + P S  W+ +RK++ + ++T++++ + Q  R++++  L+  ++      K +++ +     S
Sbjct:    3 LWYIIVAFVFFSSMIIVRIIRKTKKNLPPGPPRLPIIGNLHQLGSKPHRSMFKLSETYGPLMSLKFGSVSTVVASTPETVKEVLKTFDVECCSR--PNMTYPARVTYNLKDLCFSPYSKYWREVRKMTVVELYTAKRVQSFQHTRKEEVAALVDFIKQAASLEKPVNLNKKLMKLS 176          
BLAST of CF835257 vs. ExPASy Swiss-Prot
Match: C71BN_ARATH (Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=CYP71B23 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 1.893e-22
Identity = 58/178 (32.58%), Postives = 97/178 (54.49%), Query Frame = 3
Query:  126 CILWLVFTLVWVMALSFVSRGRHKQLPPGPRPYPVIGNLLELGAKPHKSLAKLAKIHGPIMSLRLGQVTTVVVSSPSMAKAILQNHDLSFCDRMVPEAILSLPFPHHEFSLAWLPVSTMWKNLRKISNMHIFTSQKLDANQELRRKKIKDLLAHVEDNCRAGKAIDVGQAAFNTSLNL 659
            C L L+  L+  +  +  S+    +LPPGP   P+IGNL  L   PHK L  L KIHGP+M L+LG V  VV+SS   A+ +L+ HDL  C R  PE I S    ++   + + P    W+ LRK++ + +F+ +K ++ + +R ++   L+  + +       +++ +A F  S ++
Sbjct:    6 CFLLLLLLLLVTIIFTRKSQSSKLKLPPGPPKLPIIGNLHYLNGLPHKCLLNLWKIHGPVMQLQLGYVPLVVISSNQAAEEVLKTHDLDCCSR--PETIASKTISYNFKDIGFAPYGEEWRALRKLAVIELFSLKKFNSFRYIREEENDLLVKKLSEASEKQSPVNLKKALFTLSASI 181          
The following BLAST results are available for this feature:
BLAST of CF835257 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 124
Match NameE-valueIdentityDescription
C76B1_HELTU1.541e-4046.707-ethoxycoumarin O-deethylase OS=Helianthus tubero... [more]
C76C3_ARATH1.001e-3143.14Cytochrome P450 76C3 OS=Arabidopsis thaliana GN=CY... [more]
C76C4_ARATH6.491e-3138.22Cytochrome P450 76C4 OS=Arabidopsis thaliana GN=CY... [more]
C76C1_ARATH1.224e-2936.07Cytochrome P450 76C1 OS=Arabidopsis thaliana GN=CY... [more]
C76C2_ARATH3.938e-2835.08Cytochrome P450 76C2 OS=Arabidopsis thaliana GN=CY... [more]
C80B2_ESCCA8.211e-2635.93(S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 OS... [more]
C80B1_ESCCA1.829e-2533.52(S)-N-methylcoclaurine 3'-hydroxylase isozyme 1 (F... [more]
F3PH_PETHY2.236e-2334.87Flavonoid 3'-monooxygenase OS=Petunia hybrida GN=C... [more]
C71BC_ARATH1.449e-2230.68Cytochrome P450 71B12 OS=Arabidopsis thaliana GN=C... [more]
C71BN_ARATH1.893e-2232.58Cytochrome P450 71B23 OS=Arabidopsis thaliana GN=C... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_06O20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06O20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835257 ID=CF835257; Name=CF835257; organism=Citrus sinensis; type=EST; length=660bp
TTTTTTGGGTATCCATAAGAAGCACATGTAAACCAATGCGTGAAAAAACC
TATGTATAGATACGGGGTTACAGTGTGCTAAACCAAAATATCAACTTCAA
TTCAAAGATGGATTTGTTAATTAACTGCATACTGTGGCTTGTATTCACAT
TGGTTTGGGTGATGGCTTTAAGTTTCGTTTCCAGAGGACGACACAAACAG
CTTCCACCGGGACCGAGGCCTTATCCAGTGATCGGAAACCTTCTGGAGCT
AGGTGCTAAACCTCACAAGTCACTGGCCAAGCTTGCCAAGATTCATGGGC
CCATAATGAGTCTAAGACTTGGCCAGGTGACCACAGTAGTGGTTTCTTCT
CCAAGCATGGCCAAAGCCATCCTTCAAAATCATGATTTATCATTCTGTGA
TCGAATGGTCCCTGAAGCAATCTTGTCACTGCCCTTCCCGCACCATGAAT
TCAGTTTGGCCTGGCTTCCAGTTTCAACAATGTGGAAAAATCTTCGAAAA
ATAAGCAACATGCATATTTTCACTAGTCAGAAACTCGATGCCAATCAAGA
GCTCCGGCGCAAGAAAATCAAAGACCTTCTTGCTCATGTTGAAGACAATT
GCCGTGCGGGTAAAGCAATAGATGTTGGCCAAGCTGCTTTCAATACTTCA
CTTAATTTAT
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