CF835283

Overview
NameCF835283
Unique NameCF835283
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length411
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2675 contig Csv1_Contig2675:610..1020. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of CF835283 vs. ExPASy Swiss-Prot
Match: CAES_ARATH (Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana GN=At4g34215 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 4.696e-13
Identity = 36/49 (73.47%), Postives = 41/49 (83.67%), Query Frame = -1 
Query:  265 REAQLGINLRNVVCVDAKGCHLKEDHLHLTTEAQVKLGHMLAEAYLKHF 411
            REAQLG+ L NVVCVDAKG  LK D+LHLTTEAQV+LG  LA+AYL +F
Sbjct:  211 REAQLGLKLSNVVCVDAKGLPLKSDNLHLTTEAQVQLGLSLAQAYLSNF 259
The following BLAST results are available for this feature:
BLAST of CF835283 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
CAES_ARATH4.696e-1373.47Probable carbohydrate esterase At4g34215 OS=Arabid... [more]
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Properties
Property NameValue
Genbank descriptionUCRCS02_06P11_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa06P11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF835283 ID=CF835283; Name=CF835283; organism=Citrus sinensis; type=EST; length=411bp
ACGATGCTTCTAATTCTACAAAATATCCCCCCTTCACATAAAAAGAGAGT
GTCTTCCATGACGATTTCAGATGTTGAAATGCATAATTCTTTCAAGTAAT
CCAAGAGCTCATATATGATCGTCATAGCTTAGCTCCTCGCAGACTTATTA
AATGCTTTGGTCTAGGCACATTTGTTATTGAAAATTTCCCAAACAGAGTA
GATTGATTAGCTTACCAATTAGAGTCAACACCTCCAAACATTTGCACGAT
TACTCTGATCCAACAAAATGCTTCAAGTACGCCTCGGCCAGCATGTGACC
TAACTTAACCTGAGCTTCCGTGGTAAGGTGGAGGTGATCTTCTTTGAGAT
GGCATCCCTTGGCATCGACACACACAACATTTCGAAGATTGATCCCCAGT
TGCGCTTCCCT
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