CF835300
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835300 vs. ExPASy Swiss-Prot
Match: AOC3_ARATH (Allene oxide cyclase 3, chloroplastic OS=Arabidopsis thaliana GN=AOC3 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.289e-31 Identity = 80/167 (47.90%), Postives = 110/167 (65.87%), Query Frame = 1 Query: 76 MACSSAALRTISSASVKLANSTSLTKSS--SILVPFK--LNNPSLITQCPHL----QAATSCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYDINERDRGSPAYLRLSQKPVN-SLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFG 549 MA SSAA+ ++ S S+ N+ S S S L+ F N + + P ++ TS N V + F + +++ RP+K+QEL+VY++NE DR SPA L+L +KP LGDLVPF+NKLYTGDL+KRVGITAG+C+LI++ PEK GDR+EA+YSFYFG Sbjct: 1 MASSSAAM-SLESISMTTLNNLSRNHQSHRSSLLGFSRSFQNLGISSNGPDFSSRSRSTTSKNLNVTRAFFW--NWGKKTENSRPSKIQELNVYELNEGDRNSPAVLKLGKKPTELCLGDLVPFTNKLYTGDLKKRVGITAGLCVLIQHVPEKSGDRFEASYSFYFG 164
BLAST of CF835300 vs. ExPASy Swiss-Prot
Match: AOC4_ARATH (Allene oxide cyclase 4, chloroplastic OS=Arabidopsis thaliana GN=AOC4 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.683e-31 Identity = 73/160 (45.62%), Postives = 102/160 (63.75%), Query Frame = 1 Query: 76 MACSSAALRTISSASVKLANSTSLTKSSSIL-VPFKLNNPSLITQCPHLQAATSCNFTVPKRSFTCRSQANSSDDPRPTKVQELHVYDINERDRGSPAYLRLSQKPVN-SLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFG 549 M +S+A +IS +++ + + S+ L +N + + P L + F ++S+D RPTK+QEL+VY+ NE DR SPA L+L +KP LGDLVPF+NKLYTGDL KR+GITAG+C+LI++ PEKKGDR+EA+YSFYFG Sbjct: 1 MIMASSAAASISMITLRNLSRNHQSHQSTFLGFSRSFHNQRISSNSPGLSTRARSTTSSTGGFFRTICSSSSNDYSRPTKIQELNVYEFNEGDRNSPAVLKLGKKPDQLCLGDLVPFTNKLYTGDLTKRIGITAGLCVLIQHVPEKKGDRFEASYSFYFG 160
BLAST of CF835300 vs. ExPASy Swiss-Prot
Match: AOC2_ARATH (Allene oxide cyclase 2, chloroplastic OS=Arabidopsis thaliana GN=AOC2 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.091e-30 Identity = 77/161 (47.83%), Postives = 104/161 (64.60%), Query Frame = 1 Query: 76 MACSSAALRTISSASVKLANSTSLTKSSSILVPFK-LNNPSLITQCPHLQAATSCNFTVPKRSFTCR--SQANSSDDPRPTKVQELHVYDINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFG 549 MA S+ +L++IS ++ + SS+L K N + + +S FT K R SQ + ++PRP+KVQEL VY+INE DR SP L+ + + LGDLVPF+NKLYTGDL+KRVGITAG+C++IE+ PEKKG+R+EATYSFYFG Sbjct: 1 MASSAVSLQSISMTTLNNLSCNQQFHRSSLLGSSKSFQNLGISSNGSDFSYPSS--FTAKKNLTASRALSQNGNIENPRPSKVQELSVYEINELDRHSPKILKNAFSLMFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKKGERFEATYSFYFG 159
BLAST of CF835300 vs. ExPASy Swiss-Prot
Match: AOC1_ARATH (Allene oxide cyclase 1, chloroplastic OS=Arabidopsis thaliana GN=AOC1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 2.431e-30 Identity = 76/162 (46.91%), Postives = 107/162 (66.05%), Query Frame = 1 Query: 76 MACSSAALRTISSASVK-LANSTSLTKSSSILVPFKLNNPSLITQCPHLQAATSCNFTVPKRSFTCRSQANS---SDDPRPTKVQELHVYDINERDRGSPAYLRLSQKPVNSLGDLVPFSNKLYTGDLQKRVGITAGICILIENKPEKKGDRYEATYSFYFG 549 MA S+ +L++IS ++ L+ S +SS + N + + P + TS FT K+ R+ + + +++PRP+KVQEL VY+IN+ DR SP L+ + LGDLVPF+NKLYTGDL+KRVGITAG+C++IE+ PEK GDR+EATYSFYFG Sbjct: 1 MASSTISLQSISMTTLNNLSYSKQFHRSSLLGFSKSFQNFGISSNGPGSSSPTS--FTPKKKLTPTRALSQNLGNTENPRPSKVQELSVYEINDLDRHSPKILKNAFSFRFGLGDLVPFTNKLYTGDLKKRVGITAGLCVVIEHVPEKNGDRFEATYSFYFG 160 The following BLAST results are available for this feature:
BLAST of CF835300 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835300 ID=CF835300; Name=CF835300; organism=Citrus sinensis; type=EST; length=569bpback to top |