CF835347
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: NSUN2_CHICK (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Gallus gallus GN=NSUN2 PE=2 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.218e-34 Identity = 93/248 (37.50%), Postives = 124/248 (50.00%), Query Frame = 3 Query: 3 DIWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPL------PVVQEK------------------HINPEEKMLPRNDDPPKK---LQNQDTEE 662 D+W+ W LH LQ++IA RG+ L GGR+VYSTCS+NP+ENEAV+A +L K +G++EL DVS+E+P L R PG+ KWKV K G W K V R+ I P+MFP EE++ + LERC+R++PH QN+G FF+AVL K SP+ P V +K + EK D+ PKK LQN DTE+ Sbjct: 282 DVWKKWTTQNSLQLHGLQLRIATRGVEQLAEGGRMVYSTCSLNPIENEAVIASLLEKSQGALELADVSSELPGLKRMPGITKWKVMLKDGQWFEEWKDVPSNRQTQIRPTMFPIKE-------------------------------------EEKLKAMNLERCIRILPHHQNTGGFFVAVLIKKSPMPWNKRQPKVHQKLPGKTEDTEVTATNAGDGSEDATEKPTLAEDEEPKKVQELQNSDTEQ 492
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: NSUN2_XENTR (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Xenopus tropicalis GN=nsun2 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.945e-32 Identity = 77/190 (40.53%), Postives = 105/190 (55.26%), Query Frame = 3 Query: 3 DIWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLP 569 D+W+ W LH LQ++IA RG+ L GGR+VYSTCS+NPVE+EAV+A +L K EGS+EL DV++E+P L PG+ +WKV K G W + + R I P+MFP PK EE++ + L RCMR++PH QN+G FF+AVL K +P+P Sbjct: 284 DVWKKWTTLNSLQLHGLQIRIATRGVEQLAEGGRMVYSTCSLNPVEDEAVIASLLDKSEGSLELADVASEIPGLKWMPGITQWKVMTKEGHWYEKWEDIPTSRHTQIRPTMFP------------PKD-------------------------EEKLKSMNLNRCMRILPHHQNTGGFFVAVLIKKAPMP 436
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: NSUN2_HUMAN (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Homo sapiens GN=NSUN2 PE=1 SV=2) HSP 1 Score: 136.346 bits (342), Expect = 1.646e-31 Identity = 91/248 (36.69%), Postives = 123/248 (49.60%), Query Frame = 3 Query: 3 DIWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEELNGMEVDLADGTDEK--DPESSLEANS 737 D+W+ W LH LQ++IA RG L GGR+VYSTCS+NP+E+EAV+A +L K EG++EL DVSNE+P L PG+ +WKV K G W V R I P+MFP PK E++ + LERC+R++PH QN+G FF+AVL K S +P + + KLQ + E ++ AD T+ K DP S LE+ S Sbjct: 282 DVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPIEDEAVIASLLEKSEGALELADVSNELPGLKWMPGITQWKVMTKDGQWFTDWDAVPHSRHTQIRPTMFP------------PKD-------------------------PEKLQAMHLERCLRILPHHQNTGGFFVAVLVKKSSMPWNKRQ----------------PKLQGKSAETRESTQLSPADLTEGKPTDP-SKLESPS 475
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: NSUN2_XENLA (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Xenopus laevis GN=nsun2 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31 Identity = 75/190 (39.47%), Postives = 105/190 (55.26%), Query Frame = 3 Query: 3 DIWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLP 569 D+W+ W LH LQ++IA RG+ L GGR+VYSTCS+NPVE+EAV+ +L K EGS+EL DV++E+P L PG+ +W+V K G W + V R I P+MFP ++D EE++ + L RCMR++PH QN+G FF+AVL K +P+P Sbjct: 280 DVWKKWTTLNSLQLHGLQIRIATRGVEQLAEGGRMVYSTCSLNPVEDEAVIVSLLDKSEGSLELADVASELPGLKWMPGITQWRVMTKEGQWFEKWEDVPTSRHTQIRPTMFP-----------------------------LKD--------EEKLKSMNLNRCMRILPHHQNTGGFFVAVLIKKAPMP 432
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: NSUN2_MOUSE (tRNA (cytosine-5-)-methyltransferase NSUN2 OS=Mus musculus GN=Nsun2 PE=1 SV=2) HSP 1 Score: 135.576 bits (340), Expect = 2.808e-31 Identity = 77/190 (40.53%), Postives = 105/190 (55.26%), Query Frame = 3 Query: 3 DIWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDK-GIWLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLP 569 D+W+ W LH LQ++IA RG L GGR+VYSTCS+NPVE+EAV+A +L K EG++EL DVS E+P L PG+ +WKV + G W A V + R I P+MFP TD+ E++ + LERC+R++PH QN+G FF+AVL K +P+P Sbjct: 282 DVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPVEDEAVIAALLEKSEGALELADVSAELPGLKWMPGVSQWKVMTRDGQWFADWHEVPQGRHTQIRPTMFPP-------TDL------------------------------EKLQAMHLERCLRILPHHQNTGGFFVAVLVKKAPMP 434
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: YF6H_SCHPO (Putative tRNA (cytosine-5-)-methyltransferase C23C4.17 OS=Schizosaccharomyces pombe GN=SPAC23C4.17 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.296e-30 Identity = 81/219 (36.99%), Postives = 110/219 (50.23%), Query Frame = 3 Query: 6 IWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEE 662 +WR W+ LH LQ++I +RG+ LLKVGG +VYSTCS+NP+ENEAVV L+ G+V LVDVS ++P L R PGL WKV D + +I + SM+P EEE+S L +ERC RL PH QN+G FF+AVLQK P + + +P++ PP+ + Q TE+ Sbjct: 285 LWREWSANSAFSLHPLQLRILIRGLQLLKVGGCLVYSTCSINPIENEAVVTAALKATGGAVSLVDVSKKLPLLKRDPGLLSWKVLDDSLNEFQSPAENTNDKIELTESMWPLP--------------------------------------EEEMSKLHIERCARLYPHMQNTGGFFVAVLQKTDP---INSRSFDPKKYTASMEILPPEN-KRQRTEK 461
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: NCL1_SCHPO (tRNA (cytosine-5-)-methyltransferase ncl1 OS=Schizosaccharomyces pombe GN=ncl1 PE=1 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 5.856e-29 Identity = 79/224 (35.27%), Postives = 120/224 (53.57%), Query Frame = 3 Query: 6 IWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPL-----PVVQEKHINPEEKMLPRNDDPPKKLQNQDTEE 662 +W W++ GLH+ Q++I MRG+ LL+ GGR+VYSTCS+NP+ENEAVV+ +L GSV LVDVS+E+PQL R G+ W V D + +++PS D PK E +++ L ++E+++L ++ C+R+ PH QN+G FF+AVL+K L V + + E+ LP + K + QDT+E Sbjct: 255 LWNEWSLKTALGLHATQIKILMRGLQLLEKGGRLVYSTCSLNPIENEAVVSAVLNATRGSVRLVDVSSELPQLKRSQGVDNWVVCDSDL------------------NIYPS-------FDTLPK----------ELYEKMPPTLWPLP--KKELAELNIQNCLRIYPHFQNTGGFFVAVLEKYENLTSSMKTAVDDNKVFLREQKLP--SEQASKKRKQDTQE 439
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: NCL1_YEAST (tRNA (cytosine-5-)-methyltransferase NCL1 OS=Saccharomyces cerevisiae GN=NCL1 PE=1 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.474e-28 Identity = 74/221 (33.48%), Postives = 107/221 (48.42%), Query Frame = 3 Query: 3 DIWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDKGIWLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTD-VNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQKVSPLPVVQEKHINPEEKMLPRNDDPPKKLQNQDTEE 662 ++W+ WN G GLH++Q+ I RG+ LLK GR+VYSTCS+NP+ENEAVVAE LRK + LV+ +++P LIR G+ KW V D+ N+T+ DEG + EEE S L+ CMR+ PH QN+G FFI V +KV + ++ E L KK++ ++ ++ Sbjct: 271 NVWKDWNTQAGLGLHAVQLNILNRGLHLLKNNGRLVYSTCSLNPIENEAVVAEALRKWGDKIRLVNCDDKLPGLIRSKGVSKWPVYDR----------------------------------------NLTEKTKGDEGTLD-----SFFSPSEEEASKFNLQNCMRVYPHQQNTGGFFITVFEKVEDSTEAATEKLSSETPALESEGPQTKKIKVEEVQK 446
BLAST of CF835347 vs. ExPASy Swiss-Prot
Match: NSUN2_DROME (tRNA (cytosine-5-)-methyltransferase CG6133 OS=Drosophila melanogaster GN=CG6133 PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.553e-26 Identity = 65/186 (34.95%), Postives = 98/186 (52.69%), Query Frame = 3 Query: 3 DIWRTWNVGLGNGLHSLQVQIAMRGISLLKVGGRIVYSTCSMNPVENEAVVAEILRKCEGSVELVDVSNEVPQLIRRPGLRKWKVRDKGI--WLASHKHVRKFRRIGIVPSMFPSGSSHMDVTDIEPKHGNVTDVNSDEGLQQVEDVLTSADDLEEEVSDLPLERCMRLVPHDQNSGAFFIAVLQK 554 DIW WN+ LH +Q +I RG +L+VGGR+VYSTCS+NP+ENEAV+ I++ +G++ELVD + VP L +PG+ WK+ K + + V + I P MFP + +E++ + LE+C+R++PH Q+SG FF+AVL+K Sbjct: 284 DIWLKWNLAQAYNLHGIQYRIVRRGAEMLEVGGRLVYSTCSLNPIENEAVLQRIIKDADGALELVDAGHLVPGLKYKPGMTDWKLATKEVDQIFTRFEEVPESLHTIIRPGMFPLPA--------------------------------------DEMAKIGLEKCLRVLPHLQDSGGFFVAVLEK 431 The following BLAST results are available for this feature:
BLAST of CF835347 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF835347 ID=CF835347; Name=CF835347; organism=Citrus sinensis; type=EST; length=747bpback to top |